File Info

Filename
1136_65R-T1-TDNA-1_A23H5VJLT4_1_vs_1136_65R-N1-BDNA-1_A237CFYLT3_1.segments.csv
Full Path
s3://natera-platform-sandbox/platform-users/chnobles/cgp_runs/cgp_dna_exp0024/tools_facets__5a4d9d89--20260304-144834/variant_calling/facets/1136_65R-T1-TDNA-1_A23H5VJLT4_1_vs_1136_65R-N1-BDNA-1_A237CFYLT3_1/1136_65R-T1-TDNA-1_A23H5VJLT4_1_vs_1136_65R-N1-BDNA-1_A237CFYLT3_1.segments.csv
Size
19.7 KB
Workflow Run
nobles_exp024_facets_update_01
Published
Mar 04, 2026 7:25 AM

Content

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chrom seg num.mark nhet cnlr.median mafR segclust cnlr.median.clust mafR.clust start end cf.em tcn.em lcn.em
1 1 1 3244 351 -0.370943048172363 3.56980569893635 55 -0.375177304718495 3.56980569893635 926060 12716340 0.682051012499451 3 0
2 1 2 161 23 -2.09463213578327 1.15891516669296 9 -2.09463213578327 1.15891516669296 12719464 13421172 0.656379720047805 0 0
3 1 3 1160 203 -0.43457752746851 2.99675947341114 51 -0.441014774786033 2.99675947341114 13475857 18890203 0.684427553689636 2 0
4 1 4 14867 1098 -0.1398711502827 3.80817203972883 64 -0.141247070785951 3.80817203972883 18902570 117121248 0.674745742457729 3 0
5 1 5 614 25 -0.61912532601537 3.81785363300833 43 -0.617857428678719 3.81785363300833 117143685 145738392 0.684427553689636 2 0
6 1 6 1521 124 0.285088755426051 0.752161609714155 75 0.265167238086214 0.724971513112997 145746909 152036949 0.684427553689636 4 1
7 1 7 323 35 -0.68993275676228 0.297897116127516 41 -0.67869276327726 0.297897116127516 152079439 153459128 0.266320999200081 2 0
8 1 8 1784 100 0.494016402739218 0.675613356624982 77 0.507514368075314 0.675613356624982 153534841 156815149 0.684427553689636 5 2
9 1 9 596 75 -0.343061353201915 0.760350928856501 59 -0.307225921229025 0.760350928856501 156815261 158843170 0.316933813056405 3 0
10 1 10 12674 1217 0.22166134704797 0.721949909987977 72 0.202794607866128 0.734148151942435 158843437 248918436 0.684427553689636 4 1
11 2 11 3462 324 -0.22381021484705 0.270380321350102 60 -0.211678586863895 0.247363519900611 41686 29181575 0.658479944572336 3 1
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15 2 15 6005 421 -0.207518948036297 0.271329350016597 60 -0.211678586863895 0.247363519900611 47835901 106405214 0.658479944572336 3 1
16 2 16 89 8 -1.83642855747987 0.275643495033432 10 -1.85307999077866 NA 106413152 107890855 0.594832952389618 0 0
17 2 17 2913 262 -0.486333335630849 0.278622227051916 49 -0.493388793240013 0.237784110394326 107988188 138671680 0.174093010133445 3 0
18 2 18 186 23 -1.33406648525862 0.258682505879026 16 -1.35195295037415 0.272199585074641 138780086 142131090 0.421283159484357 0 0
19 2 19 11593 919 -0.250506660880571 0.257556968128357 60 -0.211678586863895 0.247363519900611 142885475 233565462 0.658479944572336 3 1
20 2 20 136 28 -1.51950297047569 0.176903699323115 13 -1.51950297047569 0.176903699323115 233565660 233840505 0.488070781820904 0 0
21 2 21 841 100 -0.275843505711828 0.264863092403559 57 -0.307225921229025 0.281812436675257 233840821 240618980 0.362534153418573 3 0
22 2 22 172 31 -1.2659434321501 0.193510406496217 20 -1.29717278878733 0.222462730988547 240619130 240968352 0.392209062862587 0 0
23 2 23 434 58 -0.256512219970322 0.281820218077015 61 -0.211678586863895 0.308656837922521 240982898 241873336 0.684427553689636 3 1
24 3 24 1265 136 -0.150337273362144 0.246559619937476 65 -0.141247070785951 0.279301724497109 319825 12190708 0.684427553689636 3 1
25 3 25 351 33 -1.27477740212732 0.22429778171052 20 -1.29717278878733 0.222462730988547 12287306 12434469 0.392209062862587 0 0
26 3 26 20900 1631 -0.200991971601793 0.250913304089369 60 -0.211678586863895 0.247363519900611 12489785 198169869 0.658479944572336 3 1
27 4 27 4792 428 0.176144984808858 0.0118751663424063 73 0.202794607866128 0.0150479390828345 53575 54101790 0.683610842213672 4 2
28 4 28 218 8 -0.833140204866963 -0.0627813357660642 36 -0.806959454998706 NA 54102045 55125695 NA 2 NA
29 4 29 10143 866 0.266426706048054 0.0231493472866299 74 0.265167238086214 0.0191167409675771 55346343 190027276 0.684427553689636 4 2
30 5 30 7943 827 -0.206358140791348 0.305237473527276 61 -0.211678586863895 0.308656837922521 92168 108381627 0.684427553689636 3 1
31 5 31 3521 237 -0.730099956716178 2.82701490507889 37 -0.751419855180352 2.62633614421516 108381763 140802807 0.684427553689636 2 0
32 5 32 287 44 -1.45316567819014 1.88414316976972 14 -1.42840950672421 1.83724257812466 140803081 141247968 0.684427553689636 1 0
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35 6 35 14 7 0.66127800384246 0.298366943552728 81 0.622033696101644 NA 292658 391905 0.679870653911188 6 NA
36 6 36 2279 220 0.567792874104486 0.809431746214092 79 0.567792874104486 0.809431746214092 393152 27893777 0.679870653911188 5 1
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38 6 38 82 2 0.93445191250635 0.906521598343231 84 0.93445191250635 NA 32126099 32192553 0.679870653911188 7 NA
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42 6 42 630 21 0.752040988511094 1.39625913977634 83 0.762444670135414 1.31368381605861 69325029 75240331 0.679870653911188 6 1
43 6 43 352 33 -0.861213119407586 0.0108664015826908 33 -0.891920085808209 0.130107167395288 75240464 80343840 0.411880149251189 1 0
44 6 44 210 19 0.787037300491967 1.21052896661674 83 0.762444670135414 1.31368381605861 81749841 83407893 0.679870653911188 7 2
45 6 45 315 25 -0.934484576082395 0.452976839107542 30 -0.9667559510936 0.340686203899361 83408009 87265944 0.489919178400707 1 0
46 6 46 161 14 0.98152173628205 1.61067730848317 85 0.98152173628205 NA 87284297 88678276 0.679870653911188 8 NA
47 6 47 411 38 2.12832134255438 3.52918907729007 88 2.12832134255438 3.52918907729007 88769923 90544614 0.679870653911188 18 2
48 6 48 21 0 1.29366372387611 0 87 1.29366372387611 NA 90547213 90586929 0.679870653911188 10 NA
49 6 49 1874 177 -0.686142792657521 -0.00133487430471085 40 -0.67869276327726 0.0238526758747565 93240079 117270606 0.176959097472214 1 0
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51 6 51 510 50 -0.613672604543471 -0.0184351982466969 42 -0.617857428678719 -0.0184351982466969 117503959 126346368 1 2 1
52 6 52 119 31 -2.28502441530783 0.0144107811455007 6 -2.28502441530783 0.0144107811455007 126348618 127150646 0.684427553689636 0 0
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57 7 57 5672 513 0.20128679849314 0.0187277378201215 73 0.202794607866128 0.0150479390828345 193355 54757677 0.683610842213672 4 2
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61 7 61 4564 368 0.202565805222032 0.0178387866197086 73 0.202794607866128 0.0150479390828345 101058074 140704923 0.683610842213672 4 2
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86 11 86 11 0 -0.530054704006061 0 48 -0.553519225576791 NA 5508752 5516512 NA 2 NA
87 11 87 575 72 0.222388552755647 0.0205787563392229 73 0.202794607866128 0.0150479390828345 5544695 7090123 0.683610842213672 4 2
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99 11 99 19 1 2.61050613964251 2.76616671566627 90 2.64665779588782 NA 68750273 68780855 0.679870653911188 25 NA
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112 14 112 31 0 -0.243754790272632 0 63 -0.211678586863895 NA 105474895 105529929 0.47901059148992 3 NA
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123 17 123 13 3 -3.54630449230969 -0.0256729254902338 1 -3.54630449230969 NA 64868957 64897098 0.684427553689636 0 0
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153 rows