File Info

Filename
1136_3T4-T1-TDNA-1_A23H5VJLT4_1_vs_1136_3T4-N1-BDNA-1_A237CFYLT3_1.segments.csv
Full Path
s3://natera-platform-sandbox/platform-users/chnobles/cgp_runs/cgp_dna_exp0024/tools_facets__dde85de3--20260304-153357/variant_calling/facets/1136_3T4-T1-TDNA-1_A23H5VJLT4_1_vs_1136_3T4-N1-BDNA-1_A237CFYLT3_1/1136_3T4-T1-TDNA-1_A23H5VJLT4_1_vs_1136_3T4-N1-BDNA-1_A237CFYLT3_1.segments.csv
Size
11.8 KB
Workflow Run
nobles_exp024_facets_update_02
Published
Mar 04, 2026 8:36 AM

Content

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chrom seg num.mark nhet cnlr.median mafR segclust cnlr.median.clust mafR.clust start end cf.em tcn.em lcn.em
1 1 1 15 2 0.173640345249712 0.10507011921337 27 0.201257467555159 NA 69270 942109 0.111971113876705 3 NA
2 1 2 2758 424 -0.112528752787304 0.0799202503985846 13 -0.133579100707135 0.0720999906513206 942389 12777354 0.239129093196618 1 0
3 1 3 155 31 -0.403427481717488 0.0478812351944677 7 -0.403427481717488 0.0478812351944677 12777697 13513690 0.239129093196618 0 0
4 1 4 3148 529 -0.116033183411152 0.0797834863645761 13 -0.133579100707135 0.0720999906513206 13583837 27666544 0.239129093196618 1 0
5 1 5 11082 1262 0.026243568290621 0.00238577661371828 20 0.00921001234380048 0.00355954256826562 27668217 145164876 1 2 1
6 1 6 1375 132 0.184078159255058 0.0283830241788879 26 0.201257467555159 0.0354283395077143 145165179 152108863 0.207424188727019 3 1
7 1 7 226 73 -0.0346551681009045 0.0323500312155737 18 -0.0655987701063951 0.0323500312155737 152109195 153305157 0.166146922119917 1 0
8 1 8 1417 100 0.221390368853716 0.0427159488594434 26 0.201257467555159 0.0354283395077143 153307102 156528685 0.207424188727019 3 1
9 1 9 644 105 -0.0160999487567032 0.183356018364784 21 0.00921001234380048 0.183356018364784 156528881 158647821 0.211078792136319 2 0
10 1 10 4082 546 0.205836554681164 0.0361382762405718 26 0.201257467555159 0.0354283395077143 158648656 193203876 0.207424188727019 3 1
11 1 11 4674 624 0.0403281549519783 0.00523217415544934 22 0.0538609329680263 0.00293700074986442 193203992 228512028 1 2 1
12 1 12 2120 388 0.188593270035511 0.0334957997954584 26 0.201257467555159 0.0354283395077143 228735871 248748456 0.207424188727019 3 1
13 1 13 42 7 0.0973554942562 0.00458055135638982 25 0.0952769258192192 NA 248750577 248918436 NA 2 NA
14 2 14 14611 1789 -0.00852746965511286 0.00504601244866365 20 0.00921001234380048 0.00355954256826562 41686 167243228 1 2 1
15 2 15 10 3 -0.894882052257858 -0.0125654956299086 5 -0.930635219013302 NA 167243600 167246334 0.239129093196618 0 0
16 2 16 1893 198 0.0198063132941855 -0.000190067998320923 20 0.00921001234380048 0.00355954256826562 167246734 178748420 1 2 1
17 2 17 13 3 -0.930635219013302 -0.00337408435026269 5 -0.930635219013302 NA 178748781 178753154 0.239129093196618 0 0
18 2 18 458 54 0.0101898212863376 0.00973942464093819 20 0.00921001234380048 0.00355954256826562 178756224 185744351 1 2 1
19 2 19 86 32 -0.723245171590149 0.00245108661741304 6 -0.723245171590149 0.00245108661741304 185745617 185833337 0.239129093196618 0 0
20 2 20 6933 966 0.00967681423631961 0.00627479761860834 20 0.00921001234380048 0.00355954256826562 186486425 241873281 1 2 1
21 3 21 19201 2512 0.0600562742039074 0.00223451203377884 22 0.0538609329680263 0.00293700074986442 319864 198169857 1 2 1
22 4 22 1659 318 0.0348134732324827 0.00444801882457958 22 0.0538609329680263 0.00293700074986442 53552 8950348 1 2 1
23 4 23 21 0 -1.0434298503439 0 3 -1.0434298503439 NA 9174391 9269073 0.239129093196618 0 0
24 4 24 2357 271 0.0476807015575597 0.000371139040208201 22 0.0538609329680263 0.00293700074986442 9444635 53508045 1 2 1
25 4 25 214 28 -0.263131712131338 0.116026840912887 11 -0.263362095232442 0.116026840912887 53508306 55370161 0.225208766548789 0 0
26 4 26 8524 1055 0.0759462984452598 0.00216706990706561 24 0.0952769258192192 0.00243800233393703 55396278 190027056 1 2 1
27 5 27 2949 453 0.0635884566672087 0.00654530408214902 22 0.0538609329680263 0.00293700074986442 92226 45267261 1 2 1
28 5 28 4186 559 -0.138240480113885 0.0704986819570232 13 -0.133579100707135 0.0720999906513206 45267362 114493551 0.239129093196618 1 0
29 5 29 7234 890 0.065717766601604 0.000846908966792851 22 0.0538609329680263 0.00293700074986442 114495988 181260827 1 2 1
30 6 30 8158 1306 -0.126095546066276 0.0724174380711023 13 -0.133579100707135 0.0720999906513206 292608 70502705 0.239129093196618 1 0
31 6 31 14 2 -1.13036563744212 0.168829064685283 2 -1.13036563744212 NA 70502889 70528493 0.239129093196618 0 0
32 6 32 8124 1099 -0.123686722756899 0.0678260835316887 13 -0.133579100707135 0.0720999906513206 70533295 170584536 0.239129093196618 1 0
33 7 33 15375 2183 0.0481250822478972 0.00472968456168858 22 0.0538609329680263 0.00293700074986442 193373 159144683 1 2 1
34 8 34 2700 439 0.101945692002243 0.00777385224227679 24 0.0952769258192192 0.00243800233393703 166096 30812216 1 2 1
35 8 35 486 95 -0.155636266292639 0.0032352683036042 15 -0.133579100707135 0.00242940679748793 30833346 32710447 0.155190351329576 0 0
36 8 36 9 1 -0.975755163446578 0.0292613711174226 4 -0.975755163446578 NA 32710799 32713250 0.239129093196618 0 0
37 8 37 771 104 -0.0462559213141706 0.00523528843193371 16 -0.0655987701063951 0.00523528843193371 32713612 38512313 0.12154203755716 1 0
38 8 38 7377 934 0.10716471486658 0.00305062136731416 24 0.0952769258192192 0.00243800233393703 38512679 145054204 1 2 1
39 9 39 2088 347 -0.133908621483344 0.0625739216874779 13 -0.133579100707135 0.0720999906513206 14701 32785008 0.239129093196618 1 0
40 9 40 2679 331 0.0434953057732563 0.00676903983595726 22 0.0538609329680263 0.00293700074986442 32973612 84707939 1 2 1
41 9 41 361 43 -0.141324223866731 0.00100553808840325 15 -0.133579100707135 0.00242940679748793 84710630 85026954 0.155190351329576 0 0
42 9 42 1890 219 0.0399885196589767 0.00126350351384951 23 0.0538609329680263 -0.000572209462368449 85038440 101738101 1 2 1
43 9 43 637 97 -0.168708376575297 0.0711090820388097 13 -0.133579100707135 0.0720999906513206 102995484 110471625 0.239129093196618 1 0
44 9 44 5652 815 0.0885077105274865 0.000113883988313395 24 0.0952769258192192 0.00243800233393703 110472194 137816082 1 2 1
45 9 45 87 6 -0.101573559572954 0.137203520312215 19 -0.0655987701063951 NA 137816151 138233792 0.200436253654444 1 0
46 10 46 634 104 0.0126772388250064 0.0118583465894401 20 0.00921001234380048 0.00355954256826562 47024 7642135 1 2 1
47 10 47 2321 334 -0.113909322531044 0.0641066951682306 13 -0.133579100707135 0.0720999906513206 7655643 37970393 0.239129093196618 1 0
48 10 48 8602 1122 0.0405944625894708 0.000664353350600141 22 0.0538609329680263 0.00293700074986442 37971774 121565375 1 2 1
49 10 49 103 20 -0.356835065198265 0.00102771863973721 8 -0.345159177355401 0.00102771863973721 121565764 121598582 0.239129093196618 0 0
50 10 50 1321 205 0.0272320023128417 0.00732478830422626 20 0.00921001234380048 0.00355954256826562 121743703 133626694 1 2 1
51 11 51 17628 2393 0.0637136223795299 0.0023072863748236 22 0.0538609329680263 0.00293700074986442 193112 134387776 1 2 1
52 12 52 2313 377 0.0486304347865087 0.00270557409232708 22 0.0538609329680263 0.00293700074986442 66902 11353713 1 2 1
53 12 53 431 77 -0.0345950939122599 0.000436615727354034 17 -0.0655987701063951 0.000436615727354034 11354081 12079307 1 2 1
54 12 54 11439 1404 0.0460939936533823 -0.00106327348287978 23 0.0538609329680263 -0.000572209462368449 12079574 111555908 1 2 1
55 12 55 542 43 -0.152468872137108 0.0866405705102943 13 -0.133579100707135 0.0720999906513206 111598978 113278933 0.239129093196618 1 0
56 12 56 2888 456 0.0582433695390023 0.00181186634173084 22 0.0538609329680263 0.00293700074986442 113280096 133234319 1 2 1
57 13 57 5771 710 -0.135362194191607 0.0278718116817997 14 -0.133579100707135 0.0268738282374157 19174012 114326209 0.239129093196618 1 0
58 14 58 9414 1228 0.03791849342717 0.00425022258960332 22 0.0538609329680263 0.00293700074986442 18601344 105529810 1 2 1
59 15 59 479 75 0.00657666943723401 0.00117782403653591 20 0.00921001234380048 0.00355954256826562 20535333 28299563 1 2 1
60 15 60 1370 186 -0.184492659083651 0.0624408939132568 13 -0.133579100707135 0.0720999906513206 28299618 40619034 0.239129093196618 1 0
61 15 61 18 5 -1.18897663745643 0.038714811749806 1 -1.18897663745643 NA 40620754 40628027 0.239129093196618 0 0
62 15 62 5904 738 -0.162195481070614 0.0794125069834388 13 -0.133579100707135 0.0720999906513206 40628650 75018395 0.239129093196618 1 0
63 15 63 1561 147 0.0134368943411214 0.00112122666237889 20 0.00921001234380048 0.00355954256826562 75018912 87854766 1 2 1
64 15 64 748 148 -0.263362095232442 0.000949265756781804 10 -0.263362095232442 0.000949265756781804 87855002 88147051 0.202425887513478 0 0
65 15 65 1442 257 0.0236919263294275 -0.00305118346520115 20 0.00921001234380048 0.00355954256826562 88147344 101923078 1 2 1
66 16 66 7193 977 0.062714213399087 0.00299605632615922 22 0.0538609329680263 0.00293700074986442 47610 53467109 1 2 1
67 16 67 3735 447 -0.136865082024517 0.0643422062080708 13 -0.133579100707135 0.0720999906513206 53470031 78278600 0.239129093196618 1 0
68 16 68 1702 412 0.0335963480229349 0.008045512511897 22 0.0538609329680263 0.00293700074986442 78386923 90075951 1 2 1
69 17 69 4035 615 -0.118910799557271 0.078290093028174 13 -0.133579100707135 0.0720999906513206 137562 15231124 0.239129093196618 1 0
70 17 70 14189 1892 0.0547462592881026 -0.000325431466350534 23 0.0538609329680263 -0.000572209462368449 15235199 83094517 1 2 1
71 18 71 4113 475 -0.143638272693421 0.0715086614011398 13 -0.133579100707135 0.0720999906513206 47610 59469489 0.239129093196618 1 0
72 18 72 1000 131 0.0464913246953398 0.000215648897521464 22 0.0538609329680263 0.00293700074986442 59480273 80247311 1 2 1
73 19 73 2792 527 0.109941556829873 0.00154755341995481 24 0.0952769258192192 0.00243800233393703 110767 6759596 1 2 1
74 19 74 1034 202 -0.119926012983701 0.0250488043654044 14 -0.133579100707135 0.0268738282374157 6760759 9126529 0.239129093196618 1 0
75 19 75 676 100 0.20773897632383 0.0427290654156703 26 0.201257467555159 0.0354283395077143 9126967 10833012 0.207424188727019 3 1
76 19 76 986 109 -0.14806501049508 0.0805590005172968 13 -0.133579100707135 0.0720999906513206 10833194 13153138 0.239129093196618 1 0
77 19 77 362 46 0.0554945455292871 -0.0035491724004315 23 0.0538609329680263 -0.000572209462368449 13153517 14409440 1 2 1
78 19 78 2444 398 -0.163077061778912 0.0747402609143618 13 -0.133579100707135 0.0720999906513206 14409896 29611792 0.239129093196618 1 0
79 19 79 2716 409 0.0130117068330321 -0.00112531067280702 20 0.00921001234380048 0.00355954256826562 29612229 40581035 1 2 1
80 19 80 3640 517 0.0670017283702733 0.00107394804712803 22 0.0538609329680263 0.00293700074986442 40582449 49908521 1 2 1
81 19 81 3046 550 -0.00305024599398562 0.00326686559522787 20 0.00921001234380048 0.00355954256826562 49908960 58571341 1 2 1
82 20 82 7740 984 0.0605901934704628 -1.77054753236998e-05 22 0.0538609329680263 0.00293700074986442 87755 64273608 1 2 1
83 21 83 281 35 -0.174528503952785 0.0701442830588672 13 -0.133579100707135 0.0720999906513206 5128275 25585714 0.239129093196618 1 0
84 21 84 2536 363 0.0512053995632863 -0.00159645262322452 23 0.0538609329680263 -0.000572209462368449 25587701 45180534 1 2 1
85 21 85 490 124 -0.154783387487092 0.0696276243431566 13 -0.133579100707135 0.0720999906513206 45182469 46664370 0.239129093196618 1 0
86 22 86 1164 170 -0.016162057092441 0.00224777502311568 20 0.00921001234380048 0.00355954256826562 15528326 22488793 1 2 1
87 22 87 235 46 -0.212471050125042 0.00456577205080178 12 -0.212471050125042 0.00456577205080178 22488959 23317112 0.167893318797926 0 0
88 22 88 4467 696 0.0283140270204925 0.00327447398069316 20 0.00921001234380048 0.00355954256826562 23317596 46198630 1 2 1
89 22 89 250 76 -0.133043184595828 0.0640996882446731 13 -0.133579100707135 0.0720999906513206 46215350 49626752 0.239129093196618 1 0
90 22 90 614 134 0.0477751096703334 0.00433963539014749 22 0.0538609329680263 0.00293700074986442 49774251 50782304 1 2 1
91 23 91 4347 13 -0.0579358984325107 0.111711533609954 19 -0.0655987701063951 NA 284214 66615913 0.200436253654444 0 NA
92 23 92 180 3 -0.338375065072403 0.164138317364009 9 -0.345159177355401 NA 67438052 67730183 0.239129093196618 0 NA
93 23 93 5512 9 -0.0843374283228164 0.036939125614347 19 -0.0655987701063951 NA 67730263 155545308 0.200436253654444 0 NA
94 rows