File Info

Filename
1136_6K6-T1-TDNA-1_A23H5VJLT4_1_vs_1136_6K6-N1-BDNA-1_A237CFYLT3_1.segments.csv
Full Path
s3://natera-platform-sandbox/platform-users/chnobles/cgp_runs/cgp_dna_exp0024/tools_facets__dde85de3--20260304-153357/variant_calling/facets/1136_6K6-T1-TDNA-1_A23H5VJLT4_1_vs_1136_6K6-N1-BDNA-1_A237CFYLT3_1/1136_6K6-T1-TDNA-1_A23H5VJLT4_1_vs_1136_6K6-N1-BDNA-1_A237CFYLT3_1.segments.csv
Size
12.3 KB
Workflow Run
nobles_exp024_facets_update_02
Published
Mar 04, 2026 8:40 AM

Content

View in new tab
chrom seg num.mark nhet cnlr.median mafR segclust cnlr.median.clust mafR.clust start end cf.em tcn.em lcn.em
1 1 1 1133 131 -0.241866928340064 0.0399201063540376 14 -0.218284184300815 0.0484941320835436 69116 3785322 0.220515591051855 1 0
2 1 2 16933 1550 -0.0444155490233476 0.0635287158170538 22 -0.0458253827743665 0.0603153057345642 3786773 120005523 1 2 1
3 1 3 141 4 -0.269230144576979 0.0382925848565935 13 -0.269230144576979 NA 120006344 145682588 0.220515591051855 1 0
4 1 4 14731 1317 0.0699819358145919 0.0140989267884652 30 0.0865710358228075 0.0137799042902168 145686457 243613764 1 2 1
5 1 5 654 90 -0.0721128306573894 0.0236938973671639 23 -0.0458253827743665 0.00466123485706515 243613850 248918225 1 2 1
6 2 6 25466 2175 0.0205246111029264 0.0154674315861698 25 0.0118807698822233 0.0158391253049822 41680 241873382 1 2 1
7 3 7 1140 163 0.0934116288403624 0.0136053517249947 30 0.0865710358228075 0.0137799042902168 319825 12288280 1 2 1
8 3 8 318 10 -0.50806907986084 0.0425572713081436 7 -0.506080885016833 NA 12288722 12392883 0.220515591051855 0 0
9 3 9 8865 777 0.031594866202284 0.0178331881198946 25 0.0118807698822233 0.0158391253049822 12405791 98532142 1 2 1
10 3 10 2488 220 0.115002257168688 0.0502966988581643 31 0.0865710358228075 0.0538137004339306 98532297 123977096 0.220515591051855 3 1
11 3 11 217 34 0.528094946875743 0.186632306717438 37 0.528094946875743 0.186632306717438 123980504 125190554 0.220515591051855 6 2
12 3 12 7280 666 0.115875604220998 0.0549456548699628 31 0.0865710358228075 0.0538137004339306 125211200 197980549 0.220515591051855 3 1
13 3 13 25 1 -0.114100090248722 -0.0318926293672584 21 -0.101128436083256 NA 197983940 198169746 0.220515591051855 1 0
14 4 14 1745 220 -0.100695908918974 0.00169453652593526 19 -0.101128436083256 0.00540811556052566 53575 8846345 0.169330325046889 1 0
15 4 15 38 4 -1.42927056782921 0.0583290298634043 1 -1.42927056782921 NA 8867854 9450591 0.220515591051855 0 0
16 4 16 11825 1028 -0.0926921718280646 0.00160157940582588 19 -0.101128436083256 0.00540811556052566 9782023 190174716 0.169330325046889 1 0
17 5 17 11434 1040 -0.0624267814053327 0.0616998638839086 22 -0.0458253827743665 0.0603153057345642 92169 148099418 1 2 1
18 5 18 14 6 0.84595332516823 0.041264578866355 38 0.84595332516823 NA 148100464 148114562 0.220515591051855 9 NA
19 5 19 3813 348 -0.0127819868468328 0.0628483678603203 27 0.0118807698822233 0.0542615251446441 148116410 181260811 1 2 1
20 6 20 227 39 -0.0281749770567238 0.0294365942564215 22 -0.0458253827743665 0.0603153057345642 292658 3140368 1 2 1
21 6 21 572 37 -0.109148251470552 0.0051069736704273 19 -0.101128436083256 0.00540811556052566 3140625 11010841 0.169330325046889 1 0
22 6 22 4584 748 -0.00475807473385721 0.00680572744171295 26 0.0118807698822233 0.00680572744171295 11044192 38723172 1 2 1
23 6 23 1784 183 -0.131363584394483 0.0161645365470609 19 -0.101128436083256 0.00540811556052566 38723369 47008926 0.169330325046889 1 0
24 6 24 10100 984 -0.0302623723973693 0.0658145192723526 22 -0.0458253827743665 0.0603153057345642 47009151 170584609 1 2 1
25 7 25 1303 190 0.101554448310925 0.000934128657481509 29 0.0865710358228075 0.00082961987953481 193091 6814641 1 2 1
26 7 26 298 22 -0.0811359927298513 0.0661624502005718 20 -0.101128436083256 0.0619522383379314 6814941 12652702 0.220515591051855 1 0
27 7 27 304 73 -0.513100481390256 0.0772545169414497 5 -0.506080885016833 0.0743282522891848 12688156 13985903 0.220515591051855 0 0
28 7 28 14358 1404 -0.0501214116719185 0.0526227539310415 22 -0.0458253827743665 0.0603153057345642 13986322 158914444 1 2 1
29 7 29 38 5 -0.0357262534590503 -0.00825490273982309 24 -0.0458253827743665 NA 158918863 159144724 NA 2 NA
30 8 30 2877 341 0.0868705225009779 0.0126080023794963 30 0.0865710358228075 0.0137799042902168 166247 30793869 1 2 1
31 8 31 717 47 -0.557482472681252 0.0114476822633332 4 -0.549788476270329 0.0131069207264182 30794261 32854584 0.220515591051855 0 0
32 8 32 653 29 -0.140679128319239 0.0107193038496394 19 -0.101128436083256 0.00540811556052566 32855093 38951072 0.169330325046889 1 0
33 8 33 1384 79 0.0173460042911068 0.031796155943288 25 0.0118807698822233 0.0158391253049822 38952151 58601976 1 2 1
34 8 34 6 2 1.27139053725827 -0.0319345102443525 39 1.27139053725827 NA 58603262 58609823 0.220515591051855 15 NA
35 8 35 5154 498 0.0284630872067695 0.0160022674999271 25 0.0118807698822233 0.0158391253049822 58623336 141192748 1 2 1
36 8 36 1270 168 -0.103546121455623 0.0049996798098797 19 -0.101128436083256 0.00540811556052566 141193947 145054284 0.169330325046889 1 0
37 9 37 4971 501 -0.0278722922631196 0.0594758512972323 22 -0.0458253827743665 0.0603153057345642 14816 83956358 1 2 1
38 9 38 483 41 -0.415620680718489 0.0207890296505672 10 -0.415620680718489 0.0207890296505672 83968008 85589731 0.220515591051855 0 0
39 9 39 152 7 0.00303248930143685 0.0761999905121073 28 0.0118807698822233 NA 85592676 87642164 NA 2 NA
40 9 40 6796 568 0.0671321160490221 0.0147808281717018 30 0.0865710358228075 0.0137799042902168 87643478 133412827 1 2 1
41 9 41 1796 246 -0.101668310038063 0.00694763122795669 19 -0.101128436083256 0.00540811556052566 133414623 138221186 0.169330325046889 1 0
42 10 42 3049 327 0.102310040942004 0.0166708695282053 30 0.0865710358228075 0.0137799042902168 47158 35639895 1 2 1
43 10 43 10681 1069 -0.0589681681261596 0.0621128464991236 22 -0.0458253827743665 0.0603153057345642 35640338 133626863 1 2 1
44 11 44 554 88 -0.0753225289455915 0.011099570844558 23 -0.0458253827743665 0.00466123485706515 192997 1018116 1 2 1
45 11 45 327 69 -0.37452072758252 0.00726336568104036 11 -0.37452072758252 0.00726336568104036 1018436 1260566 0.220515591051855 0 0
46 11 46 314 46 -0.171332113130986 0.0169901196671434 17 -0.177625691669187 0.036855785180362 1261452 2662127 0.220515591051855 1 0
47 11 47 5898 680 0.0684771098153517 0.0118273444244447 30 0.0865710358228075 0.0137799042902168 2768933 58624431 1 2 1
48 11 48 2110 151 -0.0601035388942065 0.0490617993672941 22 -0.0458253827743665 0.0603153057345642 58624554 64914602 1 2 1
49 11 49 1206 52 0.0674431234893549 0.014720942085523 30 0.0865710358228075 0.0137799042902168 64917113 67280753 1 2 1
50 11 50 4290 349 -0.0707312099001215 0.0683598452799133 22 -0.0458253827743665 0.0603153057345642 67281046 108134297 1 2 1
51 11 51 264 3 -0.465599621529294 0.129735266194162 9 -0.458589151937287 NA 108135150 108514076 0.220515591051855 0 0
52 11 52 3577 399 -0.00450431649742825 0.0571122615637421 27 0.0118807698822233 0.0542615251446441 108514328 134387737 1 2 1
53 12 53 2353 304 -0.0140963435730373 0.0518305929826304 27 0.0118807698822233 0.0542615251446441 66876 10802164 1 2 1
54 12 54 531 74 -0.328969165544061 0.0655042328903761 12 -0.328969165544061 0.0655042328903761 10802441 11893709 0.220515591051855 0 0
55 12 55 1128 112 -0.123111515372882 0.0784866515638436 20 -0.101128436083256 0.0619522383379314 11893857 23546291 0.220515591051855 1 0
56 12 56 176 10 2.16287958003693 3.6683636094283 40 2.16287958003693 NA 23563250 25518764 0.220515591051855 33 NA
57 12 57 9829 822 -0.0908340433554524 0.0597146132791132 20 -0.101128436083256 0.0619522383379314 25519020 106496270 0.220515591051855 1 0
58 12 58 2794 211 0.0361836295329689 0.0718557106349381 27 0.0118807698822233 0.0542615251446441 106496813 121915830 1 2 1
59 12 59 1827 251 -0.0726062663193174 0.0604700000195982 22 -0.0458253827743665 0.0603153057345642 121916291 133234304 1 2 1
60 13 60 6179 572 -0.00523900913949971 0.0326832691656762 27 0.0118807698822233 0.0542615251446441 19173974 114326377 1 2 1
61 14 61 3227 307 -0.0848201610919924 0.00339063890498104 19 -0.101128436083256 0.00540811556052566 18601181 50752487 0.169330325046889 1 0
62 14 62 6145 529 0.0020650501495556 0.010035306071518 25 0.0118807698822233 0.0158391253049822 50752705 103740542 1 2 1
63 14 63 552 56 -0.232126735000899 0.00252595677380381 15 -0.218284184300815 0.00252595677380381 103740692 105529668 0.15486388003114 0 0
64 15 64 1496 141 0.0632387662152879 0.00681827025682857 30 0.0865710358228075 0.0137799042902168 20535478 37936923 1 2 1
65 15 65 7500 686 -0.0961175501669155 0.061307704531039 20 -0.101128436083256 0.0619522383379314 37937436 79003830 0.220515591051855 1 0
66 15 66 887 101 0.205422503407903 0.05091385926419 34 0.205422503407903 0.05091385926419 79004116 87854831 0.220515591051855 3 1
67 15 67 803 147 -0.184879745646446 0.0378291483720071 17 -0.177625691669187 0.036855785180362 87854998 88262029 0.220515591051855 1 0
68 15 68 1486 190 0.305748708645783 0.0206513314874678 35 0.305748708645783 0.0206513314874678 88459565 101922988 0.173683645074734 4 2
69 16 69 1677 208 -0.235536167831368 0.0547069425403301 14 -0.218284184300815 0.0484941320835436 47354 2682428 0.220515591051855 1 0
70 16 70 10799 1032 -0.0247601831065898 0.0597290070753916 22 -0.0458253827743665 0.0603153057345642 2682767 88076611 1 2 1
71 16 71 845 123 -0.176261741488222 0.0532722095638022 18 -0.177625691669187 0.0532722095638022 88427388 90075807 0.220515591051855 1 0
72 17 72 5431 582 -0.0343691747727681 0.057653387894083 22 -0.0458253827743665 0.0603153057345642 137564 19780735 1 2 1
73 17 73 13775 1356 0.10617502704186 0.000807571751681063 29 0.0865710358228075 0.00082961987953481 19780961 82956630 1 2 1
74 17 74 18 4 0.0821506348115374 -0.00248679672667693 32 0.0865710358228075 NA 82957112 83094588 NA 2 NA
75 18 75 1363 161 0.158100881049375 0.181442663097408 33 0.158100881049375 0.181442663097408 47516 14850376 0.152236635573374 3 0
76 18 76 2014 125 -0.142891447395065 0.012813007457347 19 -0.101128436083256 0.00540811556052566 14850492 47249050 0.169330325046889 1 0
77 18 77 122 0 -0.749263923634415 0 3 -0.745031189581127 NA 47249200 47868515 0.220515591051855 0 0
78 18 78 1976 221 -0.0963436155667831 0.0166814153055134 19 -0.101128436083256 0.00540811556052566 47869383 80247360 0.169330325046889 1 0
79 19 79 46 5 -0.134036707635799 -0.00146704774312627 21 -0.101128436083256 NA 110772 375748 0.220515591051855 1 0
80 19 80 3736 534 -0.130454957060062 0.0618802977485695 20 -0.101128436083256 0.0619522383379314 375990 8896016 0.220515591051855 1 0
81 19 81 339 54 -0.45309094348725 0.0682386426927726 8 -0.458589151937287 0.0682386426927726 8896193 9758640 0.220515591051855 0 0
82 19 82 1057 106 -0.0672836384329322 0.0633142696493183 22 -0.0458253827743665 0.0603153057345642 9759993 11778337 1 2 1
83 19 83 202 26 -0.736522034438465 0.0201658280598483 2 -0.745031189581127 0.0201658280598483 11780167 12582846 0.220515591051855 0 0
84 19 84 3304 383 -0.0946805753953512 0.0625530620731963 20 -0.101128436083256 0.0619522383379314 12583509 24126820 0.220515591051855 1 0
85 19 85 1323 108 -0.0416815368709804 0.00745337806497319 23 -0.0458253827743665 0.00466123485706515 29207622 36195135 1 2 1
86 19 86 307 23 -0.501605830769853 0.00112849115498983 5 -0.506080885016833 0.0743282522891848 36195227 37889543 0.220515591051855 0 0
87 19 87 5869 662 -0.0411538539067868 0.00367857534124593 23 -0.0458253827743665 0.00466123485706515 37889756 51945754 1 2 1
88 19 88 420 62 -0.532909218319488 0.0152589462725423 4 -0.549788476270329 0.0131069207264182 51945842 53576886 0.220515591051855 0 0
89 19 89 1979 284 -0.0543113263439645 0.00449716553801597 23 -0.0458253827743665 0.00466123485706515 53577123 58571490 1 2 1
90 20 90 3049 339 0.0868741254876019 0.0167386695726906 30 0.0865710358228075 0.0137799042902168 87678 33042918 1 2 1
91 20 91 4246 402 0.360430911118473 0.148826208912978 36 0.360430911118473 0.148826208912978 33043332 62303759 0.220515591051855 4 1
92 20 92 873 143 0.0144180440484959 0.0775751650067983 27 0.0118807698822233 0.0542615251446441 62304391 64273494 1 2 1
93 21 93 3496 438 -0.0416277323848904 0.00539766279860071 23 -0.0458253827743665 0.00466123485706515 5118768 46664501 1 2 1
94 22 94 1292 176 -0.0869328619108233 0.00114447719035556 19 -0.101128436083256 0.00540811556052566 15528358 23261363 0.169330325046889 1 0
95 22 95 167 50 -0.504879572366752 0.000666029539823284 6 -0.506080885016833 0.000666029539823284 23261789 23317676 0.220515591051855 0 0
96 22 96 5617 574 -0.0409482573696511 0.000564099042254847 23 -0.0458253827743665 0.00466123485706515 23318141 50782243 1 2 1
97 23 97 10606 19 -0.210041961498863 0.0405169402348345 16 -0.218284184300815 NA 284087 155545308 0.220515591051855 0 NA
98 rows