|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr8_85714223-145078636;null)
|
47s |
46s |
- |
- |
3.3 MB |
108% |
109.3 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr9_10001-41225986;null)
|
53s |
52s |
- |
- |
3.2 MB |
122% |
103.2 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr9_134185537-138334717;null)
|
52s |
51s |
- |
- |
3.3 MB |
107% |
103.1 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr9_43282957-43332174;null)
|
52s |
51s |
- |
- |
3.3 MB |
75% |
103.8 KB |
3.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_116595567-120879381;null)
|
46s |
45s |
- |
- |
3.3 MB |
160% |
101.1 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_144475607-156030895;null)
|
52s |
51s |
- |
- |
3.1 MB |
130% |
103.1 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_37285838-49348394;null)
|
35s |
33s |
- |
- |
3.2 MB |
96% |
109.4 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_49528395-50228964;null)
|
52s |
51s |
- |
- |
3.2 MB |
123% |
103.1 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_62462543-114281198;null)
|
1m 2s |
1m 1s |
- |
- |
3.3 MB |
63% |
103.4 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_20257794-21739542;null)
|
35s |
33s |
- |
- |
3.2 MB |
132% |
109.6 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_2781480-9046914;null)
|
1m 1s |
1m 0s |
- |
- |
3.3 MB |
107% |
104.4 KB |
3.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
2m 2s |
2m 0s |
0s |
1s |
0 bytes |
173% |
150.8 KB |
75.5 KB |
0 bytes |
76.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
24s |
18s |
0s |
5s |
15.1 MB |
101% |
4.0 MB |
106.5 KB |
0 bytes |
88.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1029_BNK6-N1-BDNA-1_A237CFYLT3_1)
|
3m 38s |
1m 3s |
- |
- |
17.8 MB |
106% |
5.3 MB |
110.8 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1029_BTXK-N1-BDNA-1_A237CFYLT3_1)
|
3m 29s |
1m 17s |
- |
- |
16.1 MB |
126% |
5.3 MB |
110.8 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1029_FSS-N1-BDNA-1_A237CFYLT3_1)
|
3m 40s |
1m 3s |
- |
- |
16.2 MB |
116% |
5.2 MB |
110.4 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1029_PAP-N1-BDNA-1_A237CFYLT3_1)
|
4m 30s |
1m 18s |
- |
- |
18.5 MB |
111% |
5.4 MB |
110.4 KB |
5.2 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1029_XI2-N1-BDNA-1_A237CFYLT3_1)
|
3m 34s |
1m 2s |
- |
- |
14.2 MB |
114% |
5.4 MB |
111.0 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1029_YCN-N1-BDNA-1_A237CFYLT3_1)
|
4m 37s |
1m 2s |
- |
- |
17.4 MB |
111% |
5.6 MB |
111.4 KB |
5.3 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (1136_03T-N1-BDNA-1_A237CFYLT3_1)
|
3m 9s |
1m 2s |
- |
- |
16.6 MB |
95% |
5.2 MB |
110.8 KB |
4.9 MB |
116.0 KB |
1 |