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Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume 2aefc83e-2950-4507-95d4-a8065faa7f5b -name pgrauman-main-2026-01-22t18-06-24z
Error Report
Error executing process > 'DAQ:FASTDUP (T21-D0002837)'
Caused by:
Process `DAQ:FASTDUP (T21-D0002837)` terminated with an error exit status (137)
Command executed:
fastdup \
--input T21-D0002837.bam \
--output T21-D0002837.md.bam \
--metrics T21-D0002837.md.metrics \
--num-threads 4 \
samtools index -@ 4 T21-D0002837.md.bam
cat <<-END_VERSIONS > versions.yml
"DAQ:FASTDUP":
fastdup: $(fastdup --version 2>&1 | head -1 | sed 's/fastdup //')
samtools: $(samtools --version | head -1 | sed 's/samtools //')
END_VERSIONS
Command exit status:
137
Command output:
(empty)
Work dir:
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/e02c8a3b6ae74f746a2d530850c823
Container:
292967571998.dkr.ecr.us-west-2.amazonaws.com/daq/fastdup:1.0.0
Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`
Workflow
- Language / Cluster
- Nextflow / pltf-dev
- Session ID
- 2aefc83e-2950-4507-95d4-a8065faa7f5b
- Source
- /code/main.nf
- Work Dir
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work
- Output Dir
- s3://natera-platform-sandbox/users/pgrauman/daq-outputs/20251230_LH00166_0226_B23H33FLT4-multiqc
- Submitted By
- pgrauman
- Resumed
- No
Cost and Runtime
- Status
- failed
- Cost
- $150.54
- Outputs
- 2.2 TB
- Started
- Jan 22, 2026 10:07 AM
- Completed
- Jan 22, 2026 1:04 PM
- Duration
- 2h 56m
- Post-workflow Transfer
- 2s
- Exit Status
- 137
- Peak Tasks / CPU / Mem
- 240 / 7,440 / 29.3 TB