Tasks
Actions
Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume d408899b-6075-4cc1-be8a-8049064bb674 -name pgrauman-main-2026-01-22t21-29-46z
Error Report
Error executing process > 'DAQ:FASTDUP (LOW_FF-D0001384)'
Caused by:
Process `DAQ:FASTDUP (LOW_FF-D0001384)` terminated with an error exit status (137)
Command executed:
fastdup \
--input LOW_FF-D0001384.bam \
--output LOW_FF-D0001384.md.bam \
--metrics LOW_FF-D0001384.md.metrics \
--num-threads 4 \
samtools index -@ 4 LOW_FF-D0001384.md.bam
cat <<-END_VERSIONS > versions.yml
"DAQ:FASTDUP":
fastdup: $(fastdup --version 2>&1 | head -1 | sed 's/fastdup //')
samtools: $(samtools --version | head -1 | sed 's/samtools //')
END_VERSIONS
Command exit status:
137
Command output:
(empty)
Work dir:
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/f7b984a9cf0f8e8e715334f3e86759
Container:
292967571998.dkr.ecr.us-west-2.amazonaws.com/daq/fastdup:1.0.0
Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`
Workflow
- Language / Cluster
- Nextflow / pltf-dev
- Session ID
- d408899b-6075-4cc1-be8a-8049064bb674
- Source
- /code/main.nf
- Work Dir
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work
- Output Dir
- s3://natera-platform-sandbox/users/pgrauman/daq-outputs/20251230_LH00166_0226_B23H33FLT4-multiqc
- Submitted By
- pgrauman
- Resumed
- No
Cost and Runtime
- Status
- failed
- Cost
- $178.21
- Outputs
- 2.2 TB
- Started
- Jan 22, 2026 1:30 PM
- Completed
- Jan 22, 2026 5:40 PM
- Duration
- 4h 9m
- Post-workflow Transfer
- 2s
- Exit Status
- 137
- Peak Tasks / CPU / Mem
- 246 / 7,626 / 30.0 TB