Processes


BCL_TO_FASTQ:BCLCONVERT	8
BCL_TO_FASTQ:SAMPLESHEET_CHECK	1
DAQ:FLOWCELL_QC	1
DAQ:CAT_FASTQ
FASTQ_NGSCHECKMATE:NGSCHECKMATE_FASTQ
FASTQ_NGSCHECKMATE:NGSCHECKMATE_VAFNCM
DAQ:ESTIMATEGENDER
DAQ:MERGE_GENDER
DAQ:FASTP
DAQ:SENTIEON_BWAMEM
DAQ:SAMTOOLS_MERGE
DAQ:MARKDUPLICATES_SENTIEON
BAM_POSTDEDUP_QC:SAMTOOLS_STATS
BAM_POSTDEDUP_QC:MOSDEPTH
BAM_POSTDEDUP_QC:SENTIEON_HSMETRICS
DAQ:AGGREGATE_POSTDEDUP_QC
DAQ:QC_JSON_TO_CSV
DAQ:MULTIQC
DAQ:WRITE_TRACKER_YML
GERMLINE_CNV:ClusterPanelRegions
GERMLINE_CNV:CalcPanelCoverage
GERMLINE_CNV:ProcessBatch
GERMLINE_CNV:ModelSingle
GERMLINE_CNV:AggregateBatchPerSampleData