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Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/projects/lcvs/flowcells/20260529_LH00995_0049_B23YT2HLT4/bclconvert/L008/Reports/Quality_Metrics.csv
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5.0 KB
Workflow Run
pgrauman-main-nf-260605t162022
Published
Jun 05, 2026 9:56 AM

Content

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
8 SH032_HG514 GCCTATCA AATGGTCG 1 30802371750 29987251742 1215623891777 39.47 0.97
8 SH032_HG514 GCCTATCA AATGGTCG 2 30802371750 29501354622 1205451019686 39.14 0.96
8 40PercentHG514 CTTGGATG TCGCTATC 1 23505930450 22865559334 927205327459 39.45 0.97
8 40PercentHG514 CTTGGATG TCGCTATC 2 23505930450 22525467226 920103291472 39.14 0.96
8 20PercentHG514 AGTCTCAC CGTCCATT 1 34522663950 33596229741 1362147455373 39.46 0.97
8 20PercentHG514 AGTCTCAC CGTCCATT 2 34522663950 33071622996 1351083516735 39.14 0.96
8 10PercentHG514 CTCATCAG TACTAGCG 1 438817500 427376735 17323261664 39.48 0.97
8 10PercentHG514 CTCATCAG TACTAGCG 2 438817500 417849901 17124582010 39.02 0.95
8 5PercentHG514 TGTACCGT CCTAGAGA 1 15125438700 14736873244 597106369972 39.48 0.97
8 5PercentHG514 TGTACCGT CCTAGAGA 2 15125438700 14529725796 592840844823 39.19 0.96
8 2_5PercentHG514 AAGTCGAG CGCAATGT 1 46189522650 44924549941 1821781634404 39.44 0.97
8 2_5PercentHG514 AAGTCGAG CGCAATGT 2 46189522650 44282240508 1808667131553 39.16 0.96
8 1_25PercentHG514 CACGTTGT ACACCTCA 1 46101139050 44890027709 1819812738359 39.47 0.97
8 1_25PercentHG514 CACGTTGT ACACCTCA 2 46101139050 44259256887 1806319910916 39.18 0.96
8 SH032_HG513 TCACAGCA GAGGCATT 1 7658030700 7457813442 302300180082 39.47 0.97
8 SH032_HG513 TCACAGCA GAGGCATT 2 7658030700 7328498020 299592221083 39.12 0.96
8 3140_NA24385 CTACTTGG TACTCCAG 1 52047953700 50659113973 2054346940984 39.47 0.97
8 3140_NA24385 CTACTTGG TACTCCAG 2 52047953700 49399143415 2027954766895 38.96 0.95
8 40PercentNA24385 CCTCAGTT CAGCATAC 1 7782679800 7578108313 307103114047 39.46 0.97
8 40PercentNA24385 CCTCAGTT CAGCATAC 2 7782679800 7478300404 305086605043 39.20 0.96
8 20PercentNA24385 TCCTACCT ACTCTCCA 1 38588172600 37481741903 1520704999298 39.41 0.97
8 20PercentNA24385 TCCTACCT ACTCTCCA 2 38588172600 36920244409 1508919385087 39.10 0.96
8 10PercentNA24385 ATGGCGAA CTCTATCG 1 45054925050 43802911042 1776642814885 39.43 0.97
8 10PercentNA24385 ATGGCGAA CTCTATCG 2 45054925050 43243377225 1765258216497 39.18 0.96
8 5PercentNA24385 CTTACCTG GCAATGAG 1 45275997600 44058335816 1786327796294 39.45 0.97
8 5PercentNA24385 CTTACCTG GCAATGAG 2 45275997600 43386040906 1772453155195 39.15 0.96
8 2_5PercentNA24385 CTCGATAC AAGCTGGT 1 33364073250 32516369758 1317699506983 39.49 0.97
8 2_5PercentNA24385 CTCGATAC AAGCTGGT 2 33364073250 31985174082 1306251048450 39.15 0.96
8 1_25PercentNA24385 TCCGTGAA CACGATTC 1 15855187200 15430686318 625517322405 39.45 0.97
8 1_25PercentNA24385 TCCGTGAA CACGATTC 2 15855187200 15233775249 621559620615 39.20 0.96
8 3140_NA24143 TAGAGCTC AGAAGCCT 1 32025566400 31164432112 1263408503521 39.45 0.97
8 3140_NA24143 TAGAGCTC AGAAGCCT 2 32025566400 30675469237 1253341620151 39.14 0.96
8 D0000162_22q TGACTGAC CAGAACTG 1 0 0 0 0.00 0.00
8 D0000162_22q TGACTGAC CAGAACTG 2 0 0 0 0.00 0.00
8 D0001483_22q TAGACGTG CTCACCAA 1 38576410650 37577636507 1523155817999 39.48 0.97
8 D0001483_22q TAGACGTG CTCACCAA 2 38576410650 37127160041 1513298283182 39.23 0.96
8 D0001109_22q CCGGAATT ACCGAATG 1 27266111250 26595851708 1077268938308 39.51 0.98
8 D0001109_22q CCGGAATT ACCGAATG 2 27266111250 26242134171 1069423423779 39.22 0.96
8 D0000476_22q CTCCTAGA GCTTCACA 1 30456106950 29679535121 1202684020970 39.49 0.97
8 D0000476_22q CTCCTAGA GCTTCACA 2 30456106950 29296787464 1194127609264 39.21 0.96
8 13432478-cfDNA AGCGGAAT ACTGCACT 1 0 0 0 0.00 0.00
8 13432478-cfDNA AGCGGAAT ACTGCACT 2 0 0 0 0.00 0.00
8 13511611-cfDNA GTGAGCTT CGGATCAA 1 26341810500 25698216127 1040905529971 39.52 0.98
8 13511611-cfDNA GTGAGCTT CGGATCAA 2 26341810500 25446555988 1035470420572 39.31 0.97
8 13739430-cfDNA CGTGATCA GAATGGCA 1 72636900 70905374 2871199769 39.53 0.98
8 13739430-cfDNA CGTGATCA GAATGGCA 2 72636900 70021877 2852236667 39.27 0.96
8 13929215-cfDNA TCGCATTG ACAGCAAG 1 0 0 0 0.00 0.00
8 13929215-cfDNA TCGCATTG ACAGCAAG 2 0 0 0 0.00 0.00
8 14138939-cfDNA TGACGCAT TCAGTAGG 1 0 0 0 0.00 0.00
8 14138939-cfDNA TGACGCAT TCAGTAGG 2 0 0 0 0.00 0.00
8 14389853-cfDNA CCGATGTA CAACTTGG 1 0 0 0 0.00 0.00
8 14389853-cfDNA CCGATGTA CAACTTGG 2 0 0 0 0.00 0.00
8 14558439-cfDNA TTCGCAGT TCCGATCA 1 0 0 0 0.00 0.00
8 14558439-cfDNA TTCGCAGT TCCGATCA 2 0 0 0 0.00 0.00
8 14668865-cfDNA ACGACAGA CGCAACTA 1 0 0 0 0.00 0.00
8 14668865-cfDNA ACGACAGA CGCAACTA 2 0 0 0 0.00 0.00
8 14862332-cfDNA AGCTTGAG GATCAGAC 1 150 114 5349 35.66 0.76
8 14862332-cfDNA AGCTTGAG GATCAGAC 2 150 0 2340 15.60 0.00
8 15451964-cfDNA GAGTGGTT GCATAACG 1 27585988200 26888826767 1089414709385 39.49 0.97
8 15451964-cfDNA GAGTGGTT GCATAACG 2 27585988200 26655188558 1084469802176 39.31 0.97
8 15921737-cfDNA GCTGTAAG TACAGAGC 1 102197550 99743341 4039193002 39.52 0.98
8 15921737-cfDNA GCTGTAAG TACAGAGC 2 102197550 98536392 4013525661 39.27 0.96
8 16098090-cfDNA CCAAGACT CTCGGTAA 1 0 0 0 0.00 0.00
8 16098090-cfDNA CCAAGACT CTCGGTAA 2 0 0 0 0.00 0.00
8 Undetermined 1 37321010700 32361771673 1381644344230 37.02 0.87
8 Undetermined 2 37321010700 31574449272 1357101113574 36.36 0.85
67 rows