File Info
- Filename
- Demultiplex_Stats.csv
- Full Path
- s3://natera-platform-sandbox/projects/lcvs/flowcells/20260529_LH00995_0049_B23YT2HLT4/bclconvert/L004/Reports/Demultiplex_Stats.csv
- Size
- 2.9 KB
- Workflow Run
- pgrauman-main-nf-260605t162022
- Published
- Jun 05, 2026 9:57 AM
Content
View in new tab| Lane | SampleID | Index | # Reads | # Perfect Index Reads | # One Mismatch Index Reads | # Two Mismatch Index Reads | % Reads | % Perfect Index Reads | % One Mismatch Index Reads | % Two Mismatch Index Reads |
| 4 | SH032_HG514 | GCCTATCA-AATGGTCG | 199119167 | 195442838 | 3676329 | 0 | 0.0462 | 0.9815 | 0.0185 | 0.0000 |
| 4 | 40PercentHG514 | CTTGGATG-TCGCTATC | 151244244 | 148342800 | 2901444 | 0 | 0.0351 | 0.9808 | 0.0192 | 0.0000 |
| 4 | 20PercentHG514 | AGTCTCAC-CGTCCATT | 222733701 | 218158890 | 4574811 | 0 | 0.0516 | 0.9795 | 0.0205 | 0.0000 |
| 4 | 10PercentHG514 | CTCATCAG-TACTAGCG | 2820047 | 2763789 | 56258 | 0 | 0.0007 | 0.9801 | 0.0199 | 0.0000 |
| 4 | 5PercentHG514 | TGTACCGT-CCTAGAGA | 99825777 | 97648816 | 2176961 | 0 | 0.0231 | 0.9782 | 0.0218 | 0.0000 |
| 4 | 2_5PercentHG514 | AAGTCGAG-CGCAATGT | 296664334 | 289001624 | 7662710 | 0 | 0.0688 | 0.9742 | 0.0258 | 0.0000 |
| 4 | 1_25PercentHG514 | CACGTTGT-ACACCTCA | 297608292 | 292346924 | 5261368 | 0 | 0.0690 | 0.9823 | 0.0177 | 0.0000 |
| 4 | SH032_HG513 | TCACAGCA-GAGGCATT | 50151676 | 49109106 | 1042570 | 0 | 0.0116 | 0.9792 | 0.0208 | 0.0000 |
| 4 | 3140_NA24385 | CTACTTGG-TACTCCAG | 331718455 | 325866371 | 5852084 | 0 | 0.0769 | 0.9824 | 0.0176 | 0.0000 |
| 4 | 40PercentNA24385 | CCTCAGTT-CAGCATAC | 50387276 | 49364912 | 1022364 | 0 | 0.0117 | 0.9797 | 0.0203 | 0.0000 |
| 4 | 20PercentNA24385 | TCCTACCT-ACTCTCCA | 253934895 | 249093170 | 4841725 | 0 | 0.0589 | 0.9809 | 0.0191 | 0.0000 |
| 4 | 10PercentNA24385 | ATGGCGAA-CTCTATCG | 292516255 | 288143613 | 4372642 | 0 | 0.0678 | 0.9851 | 0.0149 | 0.0000 |
| 4 | 5PercentNA24385 | CTTACCTG-GCAATGAG | 294746278 | 289741304 | 5004974 | 0 | 0.0683 | 0.9830 | 0.0170 | 0.0000 |
| 4 | 2_5PercentNA24385 | CTCGATAC-AAGCTGGT | 216509419 | 212202685 | 4306734 | 0 | 0.0502 | 0.9801 | 0.0199 | 0.0000 |
| 4 | 1_25PercentNA24385 | TCCGTGAA-CACGATTC | 102212729 | 100448035 | 1764694 | 0 | 0.0237 | 0.9827 | 0.0173 | 0.0000 |
| 4 | 3140_NA24143 | TAGAGCTC-AGAAGCCT | 210117191 | 204758935 | 5358256 | 0 | 0.0487 | 0.9745 | 0.0255 | 0.0000 |
| 4 | D0000162_22q | TGACTGAC-CAGAACTG | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | D0001483_22q | TAGACGTG-CTCACCAA | 257360688 | 252538162 | 4822526 | 0 | 0.0597 | 0.9813 | 0.0187 | 0.0000 |
| 4 | D0001109_22q | CCGGAATT-ACCGAATG | 184045649 | 180327076 | 3718573 | 0 | 0.0427 | 0.9798 | 0.0202 | 0.0000 |
| 4 | D0000476_22q | CTCCTAGA-GCTTCACA | 202969819 | 199516731 | 3453088 | 0 | 0.0470 | 0.9830 | 0.0170 | 0.0000 |
| 4 | 13432478-cfDNA | AGCGGAAT-ACTGCACT | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | 13511611-cfDNA | GTGAGCTT-CGGATCAA | 173963697 | 170608663 | 3355034 | 0 | 0.0403 | 0.9807 | 0.0193 | 0.0000 |
| 4 | 13739430-cfDNA | CGTGATCA-GAATGGCA | 476549 | 467520 | 9029 | 0 | 0.0001 | 0.9811 | 0.0189 | 0.0000 |
| 4 | 13929215-cfDNA | TCGCATTG-ACAGCAAG | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | 14138939-cfDNA | TGACGCAT-TCAGTAGG | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | 14389853-cfDNA | CCGATGTA-CAACTTGG | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | 14558439-cfDNA | TTCGCAGT-TCCGATCA | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | 14668865-cfDNA | ACGACAGA-CGCAACTA | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | 14862332-cfDNA | AGCTTGAG-GATCAGAC | 1 | 0 | 1 | 0 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 4 | 15451964-cfDNA | GAGTGGTT-GCATAACG | 184701590 | 181921381 | 2780209 | 0 | 0.0428 | 0.9849 | 0.0151 | 0.0000 |
| 4 | 15921737-cfDNA | GCTGTAAG-TACAGAGC | 663539 | 650229 | 13310 | 0 | 0.0002 | 0.9799 | 0.0201 | 0.0000 |
| 4 | 16098090-cfDNA | CCAAGACT-CTCGGTAA | 0 | 0 | 0 | 0 | 0.0000 | 0.0000 | 0.0000 | 0.0000 |
| 4 | Undetermined | 237997811 | 237997811 | 0 | 0 | 0.0552 | 1.0000 | 0.0000 | 0.0000 |
34 rows