File Info

Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/projects/lcvs/flowcells/20260529_LH00995_0049_B23YT2HLT4/bclconvert/L004/Reports/Quality_Metrics.csv
Size
5.0 KB
Workflow Run
pgrauman-main-nf-260605t162022
Published
Jun 05, 2026 9:57 AM

Content

View in new tab
Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
4 SH032_HG514 GCCTATCA AATGGTCG 1 29867875050 29012545469 1177509032099 39.42 0.97
4 SH032_HG514 GCCTATCA AATGGTCG 2 29867875050 28529494173 1167397124046 39.09 0.96
4 40PercentHG514 CTTGGATG TCGCTATC 1 22686636600 22016465119 893928518641 39.40 0.97
4 40PercentHG514 CTTGGATG TCGCTATC 2 22686636600 21693120430 887141014132 39.10 0.96
4 20PercentHG514 AGTCTCAC CGTCCATT 1 33410055150 32441333754 1316954306649 39.42 0.97
4 20PercentHG514 AGTCTCAC CGTCCATT 2 33410055150 31928007073 1306055923669 39.09 0.96
4 10PercentHG514 CTCATCAG TACTAGCG 1 423007050 410967762 16680359670 39.43 0.97
4 10PercentHG514 CTCATCAG TACTAGCG 2 423007050 401420343 16480671414 38.96 0.95
4 5PercentHG514 TGTACCGT CCTAGAGA 1 14973866550 14559383639 590587106309 39.44 0.97
4 5PercentHG514 TGTACCGT CCTAGAGA 2 14973866550 14346996593 586194261587 39.15 0.96
4 2_5PercentHG514 AAGTCGAG CGCAATGT 1 44499650100 43177319783 1753167609434 39.40 0.97
4 2_5PercentHG514 AAGTCGAG CGCAATGT 2 44499650100 42565286797 1740673157656 39.12 0.96
4 1_25PercentHG514 CACGTTGT ACACCTCA 1 44641243800 43387377173 1760771043389 39.44 0.97
4 1_25PercentHG514 CACGTTGT ACACCTCA 2 44641243800 42760386253 1747285305346 39.14 0.96
4 SH032_HG513 TCACAGCA GAGGCATT 1 7522751400 7309149692 296638541579 39.43 0.97
4 SH032_HG513 TCACAGCA GAGGCATT 2 7522751400 7179733791 293928094998 39.07 0.95
4 3140_NA24385 CTACTTGG TACTCCAG 1 49757768250 48306026885 1961636694041 39.42 0.97
4 3140_NA24385 CTACTTGG TACTCCAG 2 49757768250 47052072987 1935301389759 38.89 0.95
4 40PercentNA24385 CCTCAGTT CAGCATAC 1 7558091400 7344243125 297956192750 39.42 0.97
4 40PercentNA24385 CCTCAGTT CAGCATAC 2 7558091400 7246203723 295975808847 39.16 0.96
4 20PercentNA24385 TCCTACCT ACTCTCCA 1 38090234250 36919584506 1499586518102 39.37 0.97
4 20PercentNA24385 TCCTACCT ACTCTCCA 2 38090234250 36361555603 1487926066486 39.06 0.95
4 10PercentNA24385 ATGGCGAA CTCTATCG 1 43877438250 42559704777 1728340211592 39.39 0.97
4 10PercentNA24385 ATGGCGAA CTCTATCG 2 43877438250 42018509261 1717353226937 39.14 0.96
4 5PercentNA24385 CTTACCTG GCAATGAG 1 44211941700 42928222692 1742540469369 39.41 0.97
4 5PercentNA24385 CTTACCTG GCAATGAG 2 44211941700 42258589226 1728741196943 39.10 0.96
4 2_5PercentNA24385 CTCGATAC AAGCTGGT 1 32476412850 31589609980 1281563863636 39.46 0.97
4 2_5PercentNA24385 CTCGATAC AAGCTGGT 2 32476412850 31058320411 1270048558570 39.11 0.96
4 1_25PercentNA24385 TCCGTGAA CACGATTC 1 15331909350 14889400461 604259546454 39.41 0.97
4 1_25PercentNA24385 TCCGTGAA CACGATTC 2 15331909350 14699909538 600463714833 39.16 0.96
4 3140_NA24143 TAGAGCTC AGAAGCCT 1 31517578650 30600235224 1242065710029 39.41 0.97
4 3140_NA24143 TAGAGCTC AGAAGCCT 2 31517578650 30116266490 1232097481646 39.09 0.96
4 D0000162_22q TGACTGAC CAGAACTG 1 0 0 0 0.00 0.00
4 D0000162_22q TGACTGAC CAGAACTG 2 0 0 0 0.00 0.00
4 D0001483_22q TAGACGTG CTCACCAA 1 38604103200 37536014360 1522972696451 39.45 0.97
4 D0001483_22q TAGACGTG CTCACCAA 2 38604103200 37076259350 1512881625818 39.19 0.96
4 D0001109_22q CCGGAATT ACCGAATG 1 27606847350 26881798450 1089888711817 39.48 0.97
4 D0001109_22q CCGGAATT ACCGAATG 2 27606847350 26514192917 1081695480416 39.18 0.96
4 D0000476_22q CTCCTAGA GCTTCACA 1 30445472850 29618583929 1201320403934 39.46 0.97
4 D0000476_22q CTCCTAGA GCTTCACA 2 30445472850 29228245628 1192568951693 39.17 0.96
4 13432478-cfDNA AGCGGAAT ACTGCACT 1 0 0 0 0.00 0.00
4 13432478-cfDNA AGCGGAAT ACTGCACT 2 0 0 0 0.00 0.00
4 13511611-cfDNA GTGAGCTT CGGATCAA 1 26094554550 25409930506 1030283140918 39.48 0.97
4 13511611-cfDNA GTGAGCTT CGGATCAA 2 26094554550 25153322234 1024693303853 39.27 0.96
4 13739430-cfDNA CGTGATCA GAATGGCA 1 71482350 69634031 2822850602 39.49 0.97
4 13739430-cfDNA CGTGATCA GAATGGCA 2 71482350 68764592 2804159666 39.23 0.96
4 13929215-cfDNA TCGCATTG ACAGCAAG 1 0 0 0 0.00 0.00
4 13929215-cfDNA TCGCATTG ACAGCAAG 2 0 0 0 0.00 0.00
4 14138939-cfDNA TGACGCAT TCAGTAGG 1 0 0 0 0.00 0.00
4 14138939-cfDNA TGACGCAT TCAGTAGG 2 0 0 0 0.00 0.00
4 14389853-cfDNA CCGATGTA CAACTTGG 1 0 0 0 0.00 0.00
4 14389853-cfDNA CCGATGTA CAACTTGG 2 0 0 0 0.00 0.00
4 14558439-cfDNA TTCGCAGT TCCGATCA 1 0 0 0 0.00 0.00
4 14558439-cfDNA TTCGCAGT TCCGATCA 2 0 0 0 0.00 0.00
4 14668865-cfDNA ACGACAGA CGCAACTA 1 0 0 0 0.00 0.00
4 14668865-cfDNA ACGACAGA CGCAACTA 2 0 0 0 0.00 0.00
4 14862332-cfDNA AGCTTGAG GATCAGAC 1 150 1 2356 15.71 0.01
4 14862332-cfDNA AGCTTGAG GATCAGAC 2 150 5 2435 16.23 0.03
4 15451964-cfDNA GAGTGGTT GCATAACG 1 27705238500 26960223754 1093306197136 39.46 0.97
4 15451964-cfDNA GAGTGGTT GCATAACG 2 27705238500 26718877541 1088162659190 39.28 0.96
4 15921737-cfDNA GCTGTAAG TACAGAGC 1 99530850 96972218 3930732182 39.49 0.97
4 15921737-cfDNA GCTGTAAG TACAGAGC 2 99530850 95780980 3905327269 39.24 0.96
4 16098090-cfDNA CCAAGACT CTCGGTAA 1 0 0 0 0.00 0.00
4 16098090-cfDNA CCAAGACT CTCGGTAA 2 0 0 0 0.00 0.00
4 Undetermined 1 35699671650 30360929206 1309095954568 36.67 0.85
4 Undetermined 2 35699671650 29929865429 1291163468606 36.17 0.84
67 rows