sample_id,mosdepth_mean_coverage,mosdepth_mean_coverage_target,samtools_raw_total_sequences,samtools_reads_mapped,samtools_reads_unmapped,samtools_reads_properly_paired,samtools_reads_duplicated,samtools_reads_mq0,samtools_bases_mapped_cigar,samtools_mismatches,samtools_error_rate,samtools_average_length,samtools_average_quality,samtools_insert_size_average,samtools_insert_size_std_dev,samtools_properly_paired_percent,samtools_duplication_rate,samtools_mapping_rate,sentieon_insert_size,sentieon_prenatal_exome_v1_targets_mean_target_coverage,sentieon_prenatal_exome_v1_targets_pct_selected_bases,sentieon_prenatal_exome_v1_targets_zero_cvg_targets_pct,sentieon_prenatal_exome_v1_targets_pct_target_bases_10x,sentieon_prenatal_exome_v1_targets_pct_target_bases_20x,sentieon_prenatal_exome_v1_targets_pct_target_bases_30x,sentieon_prenatal_exome_v1_targets_at_dropout,sentieon_prenatal_exome_v1_targets_gc_dropout
10PercentHG514,0.56,20.67,45343264,45342206,1058,44463932,30176010,2095124,6312170877,18932839,0.002999418,139.0,39.4,320.7,161.6,98.1,0.6655014954371172,0.9999766668760326,,21.4008,0.865476,0.00899447,0.873134,0.436841,0.150477,3.4006,0.403849
10PercentNA24385,44.26,1569.99,4701118100,4701007218,110882,4627432294,3437706590,212976722,644605662664,1800625518,0.002793375,137.0,39.5,266.2,134.2,98.4,0.7312529736276994,0.9999764136961375,,1688.36,0.876494,0.00571528,0.990796,0.98976,0.989104,3.00048,0.240992
13432478-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
13511611-cfDNA,26.59,1039.62,2779412168,2779337889,74279,2732438882,1916703511,127489596,391181640793,1123527407,0.002872138,140.0,39.5,219.3,114.7,98.3,0.6896075123608655,0.999973275284301,,1132.44,0.878188,0.00720235,0.988582,0.987458,0.986738,0.117061,1.6586
13739430-cfDNA,0.11,4.42,7645232,7645138,94,7500176,4116991,338449,1078620007,3216106,0.002981686,141.0,39.5,226.8,123.6,98.1,0.5385043907104454,0.9999877047550683,,4.73787,0.877424,0.0348763,0.0811484,0.0105429,0.00408489,0.0841164,3.88757
13929215-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
14138939-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
14389853-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
14558439-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
14668865-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
14862332-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
15451964-cfDNA,22.98,916.63,2937398860,2937310815,88045,2569982228,2150310552,139409882,408989588072,1153044496,0.002819251,139.0,39.5,197.8,102.8,87.5,0.7320458182515942,0.9999700262020256,,1028.4,0.883428,0.00863859,0.986306,0.985163,0.984484,0.0915372,1.16466
15921737-cfDNA,0.11,4.59,10637896,10637695,201,10457032,6994708,495042,1497143477,4571779,0.003053668,140.0,39.5,233.1,125.1,98.3,0.6575273907547131,0.9999811052862333,,4.77615,0.875462,0.0360668,0.0820325,0.0110678,0.00450978,0.0827686,3.43982
16098090-cfDNA,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
1_25PercentHG514,41.44,1461.87,4786699986,4786541621,158365,4715730758,3607854727,216555050,658031806902,1887564323,0.0028685,137.0,39.5,269.4,133.9,98.5,0.7537248495941145,0.999966915620268,,1569.32,0.877618,0.00674055,0.989651,0.9886,0.987954,3.56347,0.226716
1_25PercentNA24385,17.56,655.87,1644948546,1644916857,31689,1622076210,1137743993,73495053,225582495803,617202423,0.002736039,137.0,39.5,263.7,131.5,98.6,0.6916593201450814,0.9999807355676401,,705.523,0.878307,0.00636349,0.988268,0.987051,0.986408,2.84225,0.293378
20PercentHG514,37.65,1333.77,3584950312,3584823013,127299,3531869482,2514340968,161848317,494611109091,1452968371,0.002937597,138.0,39.5,274.8,135.7,98.5,0.7013600605798299,0.9999644907212315,,1433.26,0.876003,0.00672361,0.989751,0.988692,0.98803,3.64652,0.212078
20PercentNA24385,41.36,1485.09,4057683532,4057391515,292017,3995074088,2868372725,184574935,557391975413,1598848680,0.002868446,137.0,39.5,265.0,130.9,98.5,0.7068990724336262,0.9999280335694746,,1603.19,0.876975,0.0057407,0.990672,0.989585,0.988921,3.50153,0.22767
2_5PercentHG514,41.67,1463.52,4777635264,4777509835,125429,4704613476,3595239533,216088560,656746673407,1870434570,0.002848031,137.0,39.5,272.2,136.5,98.5,0.7525144416298414,0.9999737466355071,,1568.45,0.876785,0.00664311,0.989771,0.988679,0.988037,3.45874,0.22326
2_5PercentNA24385,38.7,1391.24,3476405506,3476306350,99156,3423188882,2368837975,157304984,478870051061,1360743402,0.002841571,137.0,39.5,271.7,134.2,98.5,0.6814043905153107,0.9999714774355786,,1499.6,0.87607,0.00581272,0.990413,0.988962,0.987936,3.34579,0.193391
3140_NA24143,37.73,1344.59,3363182662,3363094030,88632,3309041536,2298093088,153009135,463754490776,1329172280,0.002866112,137.0,39.5,280.0,140.3,98.4,0.6833090316401018,0.9999736463912586,,1438.6,0.873763,0.00681681,0.989506,0.988491,0.987816,3.46178,0.220059
3140_NA24385,48.38,1573.99,5352361062,5352220283,140779,5236956012,4089597847,255356823,748261026864,2251965300,0.003009598,139.0,39.4,340.1,170.7,97.8,0.7640736115571121,0.9999736977759218,,1616.93,0.859972,0.00503317,0.991649,0.990712,0.990034,3.66311,0.354251
40PercentHG514,24.21,874.99,2434505476,2434448066,57410,2393885668,1744881342,111332090,334644132780,956588630,0.002858525,137.0,39.5,272.2,136.3,98.3,0.7167292738510973,0.9999764182087221,,936.761,0.876409,0.00688036,0.989068,0.988001,0.987367,3.80016,0.268857
40PercentNA24385,10.07,385.6,810559176,810532199,26977,799600494,517291645,36357166,111381576066,310477018,0.002787508,137.0,39.5,263.1,128.9,98.6,0.6381910911832056,0.9999667180376229,,416.32,0.878506,0.00652025,0.988454,0.987343,0.98649,2.9546,0.347378
5PercentHG514,19.01,700.83,1597446062,1597411196,34866,1574063560,1055172273,72008926,220182909473,638470747,0.002899729,137.0,39.5,276.1,137.1,98.5,0.6605370272589522,0.9999781739109511,,751.52,0.875829,0.00702441,0.98862,0.987484,0.986845,3.48467,0.300566
5PercentNA24385,44.52,1557.08,4725085206,4724950420,134786,4646372032,3474484478,214488130,651023146963,1845677806,0.002835042,137.0,39.5,278.0,139.2,98.3,0.7353273700944135,0.9999714743768369,,1660.99,0.873931,0.00562207,0.990888,0.989793,0.989059,3.29993,0.217488
D0000162_22q,0.0,0.0,0,0,0,0,0,0,0,0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0
D0000476_22q,16.66,570.0,3217517070,3217392669,124401,2891403072,2675308535,162994061,450036254611,1348396701,0.002996196,140.0,39.5,202.8,104.8,89.9,0.8314823128506355,0.9999613363356609,,619.71,0.875754,0.00748621,0.987467,0.986212,0.98525,0.0584103,3.85839
D0001109_22q,20.19,713.86,2910792518,2910697565,94953,2823108928,2265151375,139445230,409535043694,1249461958,0.003050928,140.0,39.5,216.8,113.3,97.0,0.7781905996365489,0.9999673789871958,,770.704,0.876049,0.00628723,0.989168,0.98782,0.986965,0.0585233,2.89857
D0001483_22q,23.92,851.22,4092956436,4092824135,132301,3893807774,3323389965,197793630,573408582572,1671273595,0.002914629,140.0,39.5,210.6,111.2,95.1,0.8119778494998865,0.9999676759325273,,932.742,0.878578,0.0065499,0.989022,0.987716,0.986762,1.02084,0.43738
SH032_HG513,11.7,436.55,803021270,803002871,18399,789881172,472039399,36499147,111118197690,334674303,0.003011877,138.0,39.5,287.6,143.6,98.4,0.5878292601141187,0.9999770877800036,,466.442,0.871586,0.00733793,0.987906,0.986863,0.986079,3.65306,0.26756
SH032_HG514,31.85,1091.22,3199954870,3199868337,86533,3147873072,2309405851,146017640,442020433116,1293255740,0.002925783,138.0,39.5,283.8,142.4,98.4,0.7216995066558548,0.9999729580561241,,1162.92,0.874268,0.00681258,0.989526,0.988402,0.987758,3.89966,0.204711