This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o SH032_HG514.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 2896.449 CPU sec, 118.001 real sec [M::process] read 727390 sequences (100000091 bp) in 1.106 CPU sec, 1.110 real sec... [M::process] read 726686 sequences (100000111 bp) in 1.807 CPU sec, 1.832 real sec... [M::process] read 726192 sequences (100000089 bp) in 1.750 CPU sec, 1.797 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306766, 1, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 157, 207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 357) [M::mem_pestat] mean and std.dev: (175.38, 67.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 446) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (279.51, 143.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 180, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 971) [M::mem_pestat] mean and std.dev: (193.45, 79.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1245) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726178 sequences (100000269 bp) in 1.721 CPU sec, 1.750 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 306973, 2, 7) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 267, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 631) [M::mem_pestat] mean and std.dev: (234.65, 90.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 788) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (281.97, 144.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305848, 6, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 158, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (173.75, 61.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 605) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (283.88, 145.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 246, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 794) [M::mem_pestat] mean and std.dev: (230.11, 98.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727390 reads in 324.419 CPU sec, 10.787 real sec [M::mem_process_seqs] Processed 726686 reads in 200.407 CPU sec, 6.774 real sec [M::mem_process_seqs] Processed 726192 reads in 208.649 CPU sec, 7.082 real sec sorting block 0, #reads = 1104161 mem = 536876850 peak = 602173440 [M::process] read 726202 sequences (100000166 bp) in 2.059 CPU sec, 2.259 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 306179, 3, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 202, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 484) [M::mem_pestat] mean and std.dev: (208.81, 72.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 584) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (283.62, 145.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 206, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 404) [M::mem_pestat] mean and std.dev: (199.09, 62.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 489) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725062 sequences (100000004 bp) in 1.804 CPU sec, 1.966 real sec... [M::process] read 724852 sequences (100000186 bp) in 1.607 CPU sec, 1.666 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 306465, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 165, 233) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 455) [M::mem_pestat] mean and std.dev: (162.60, 67.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 566) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (283.62, 145.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 240, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (73, 373) [M::mem_pestat] mean and std.dev: (219.08, 38.17) [M::mem_pestat] low and high boundaries for proper pairs: (13, 433) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726178 reads in 197.016 CPU sec, 6.372 real sec sorting block 1, #reads = 1102838 mem = 536878060 peak = 910454784 [M::mem_process_seqs] Processed 726202 reads in 110.450 CPU sec, 3.539 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306105, 6, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 202, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 544) [M::mem_pestat] mean and std.dev: (208.00, 86.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 681) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (284.80, 144.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 998) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF sorting block 2, #reads = 1103246 mem = 536877559 peak = 910454784 [M::process] read 724080 sequences (100000281 bp) in 1.866 CPU sec, 2.251 real sec... [M::process] read 723888 sequences (100000205 bp) in 1.609 CPU sec, 1.612 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305458, 2, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 339, 629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1559) [M::mem_pestat] mean and std.dev: (412.05, 304.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2024) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 798) [M::mem_pestat] mean and std.dev: (286.68, 145.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 169, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (43, 318) [M::mem_pestat] mean and std.dev: (177.83, 43.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 373) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725062 reads in 197.036 CPU sec, 6.452 real sec [M::mem_process_seqs] Processed 724852 reads in 110.887 CPU sec, 3.622 real sec sorting block 3, #reads = 1102554 mem = 536877652 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305312, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 151, 221) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 421) [M::mem_pestat] mean and std.dev: (163.92, 60.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 521) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 267, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 798) [M::mem_pestat] mean and std.dev: (288.90, 145.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1006) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (123, 208, 272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 570) [M::mem_pestat] mean and std.dev: (212.33, 95.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 719) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723966 sequences (100000185 bp) in 1.980 CPU sec, 2.252 real sec... [M::process] read 724112 sequences (100000083 bp) in 1.596 CPU sec, 1.607 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305133, 7, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 237, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 689) [M::mem_pestat] mean and std.dev: (230.47, 112.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 864) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 268, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (289.65, 145.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 195, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (212.25, 69.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724080 reads in 198.548 CPU sec, 6.512 real sec [M::mem_process_seqs] Processed 723888 reads in 110.981 CPU sec, 3.704 real sec sorting block 4, #reads = 1101442 mem = 536879799 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305206, 1, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 161, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (11, 356) [M::mem_pestat] mean and std.dev: (189.25, 64.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 445) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (290.68, 146.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 723710 sequences (100000084 bp) in 2.098 CPU sec, 2.265 real sec... [M::process] read 723640 sequences (100000176 bp) in 1.660 CPU sec, 1.676 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305049, 6, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 224, 272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 540) [M::mem_pestat] mean and std.dev: (216.89, 84.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 674) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 269, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (291.56, 147.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1023) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 193, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 438) [M::mem_pestat] mean and std.dev: (194.89, 53.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 534) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723966 reads in 199.290 CPU sec, 6.504 real sec sorting block 5, #reads = 1101121 mem = 536877307 peak = 910454784 [M::mem_process_seqs] Processed 724112 reads in 111.654 CPU sec, 3.677 real sec sorting block 6, #reads = 1101338 mem = 536880265 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 304962, 5, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 184, 214) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 372) [M::mem_pestat] mean and std.dev: (177.17, 58.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 451) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 268, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (289.87, 145.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 208, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 611) [M::mem_pestat] mean and std.dev: (217.18, 73.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 763) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723538 sequences (100000200 bp) in 2.002 CPU sec, 2.239 real sec... [M::process] read 723058 sequences (100000217 bp) in 1.494 CPU sec, 1.497 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305021, 6, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (116, 168, 217) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 419) [M::mem_pestat] mean and std.dev: (172.80, 57.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 520) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 268, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (289.92, 145.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1010) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 171, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1004) [M::mem_pestat] mean and std.dev: (266.85, 198.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1290) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723710 reads in 204.100 CPU sec, 6.629 real sec [M::mem_process_seqs] Processed 723640 reads in 114.493 CPU sec, 3.688 real sec sorting block 7, #reads = 1101146 mem = 536879780 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305044, 6, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 185, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (14, 354) [M::mem_pestat] mean and std.dev: (177.13, 44.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 422) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 271, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (292.63, 147.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 220, 233) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 407) [M::mem_pestat] mean and std.dev: (202.29, 73.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 494) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723244 sequences (100000240 bp) in 2.044 CPU sec, 2.262 real sec... [M::process] read 722848 sequences (100000094 bp) in 1.873 CPU sec, 1.897 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304486, 7, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (113, 174, 214) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 416) [M::mem_pestat] mean and std.dev: (164.60, 58.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 517) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 274, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (296.33, 149.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1045) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 280, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (240.85, 104.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723538 reads in 202.558 CPU sec, 6.522 real sec [M::mem_process_seqs] Processed 723058 reads in 112.804 CPU sec, 3.608 real sec sorting block 8, #reads = 1101375 mem = 536879095 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 304931, 5, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 208, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 429) [M::mem_pestat] mean and std.dev: (214.43, 72.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 518) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 830) [M::mem_pestat] mean and std.dev: (296.06, 150.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 233, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (12, 397) [M::mem_pestat] mean and std.dev: (198.29, 61.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 474) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723548 sequences (100000207 bp) in 2.134 CPU sec, 2.356 real sec... [M::process] read 727498 sequences (100000274 bp) in 1.668 CPU sec, 1.674 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304823, 5, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 174, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (64, 294) [M::mem_pestat] mean and std.dev: (168.62, 45.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 349) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 276, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (297.42, 150.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 206, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (40, 405) [M::mem_pestat] mean and std.dev: (220.29, 74.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 520) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723244 reads in 199.669 CPU sec, 6.445 real sec sorting block 9, #reads = 1100307 mem = 536878543 peak = 910454784 [M::mem_process_seqs] Processed 722848 reads in 112.107 CPU sec, 3.623 real sec sorting block 10, #reads = 1100431 mem = 536878416 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 304207, 4, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 210, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 463) [M::mem_pestat] mean and std.dev: (210.76, 67.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 563) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 272, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (293.88, 148.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1035) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 260, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 777) [M::mem_pestat] mean and std.dev: (245.24, 90.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727228 sequences (100000014 bp) in 2.170 CPU sec, 2.311 real sec... [M::process] read 726674 sequences (100000077 bp) in 1.591 CPU sec, 1.597 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 306860, 11, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 222, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 959) [M::mem_pestat] mean and std.dev: (226.38, 78.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1219) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (279.82, 143.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (107, 627, 5642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16712) [M::mem_pestat] mean and std.dev: (2443.09, 2975.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22247) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 211, 231) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (66, 341) [M::mem_pestat] mean and std.dev: (194.00, 47.90) [M::mem_pestat] low and high boundaries for proper pairs: (2, 396) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723548 reads in 201.436 CPU sec, 6.483 real sec [M::mem_process_seqs] Processed 727498 reads in 113.285 CPU sec, 3.622 real sec sorting block 11, #reads = 1100631 mem = 536877539 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 306702, 4, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (110, 174, 175) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 305) [M::mem_pestat] mean and std.dev: (159.43, 51.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 257, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (281.24, 144.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 998) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 198, 274) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 484) [M::mem_pestat] mean and std.dev: (203.43, 58.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 589) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726584 sequences (100000191 bp) in 2.330 CPU sec, 2.634 real sec... [M::process] read 726098 sequences (100000243 bp) in 1.511 CPU sec, 1.519 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 306928, 6, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 193, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (19, 324) [M::mem_pestat] mean and std.dev: (166.62, 47.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 385) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (283.10, 145.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (112, 138, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (205.26, 141.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1060) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727228 reads in 200.236 CPU sec, 6.450 real sec [M::mem_process_seqs] Processed 726674 reads in 112.969 CPU sec, 3.645 real sec sorting block 12, #reads = 1104344 mem = 536876712 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 306352, 7, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 217, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 557) [M::mem_pestat] mean and std.dev: (228.52, 82.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 691) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (283.02, 145.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 177, 198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 358) [M::mem_pestat] mean and std.dev: (167.33, 56.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 438) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725046 sequences (100000028 bp) in 2.099 CPU sec, 2.395 real sec... [M::process] read 725102 sequences (100000152 bp) in 1.570 CPU sec, 1.572 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 306255, 2, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 227, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 544) [M::mem_pestat] mean and std.dev: (200.42, 74.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 682) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 261, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (285.09, 146.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 266, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (5, 490) [M::mem_pestat] mean and std.dev: (236.55, 63.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 587) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726584 reads in 195.230 CPU sec, 6.284 real sec [M::mem_process_seqs] Processed 726098 reads in 108.762 CPU sec, 3.498 real sec sorting block 13, #reads = 1103387 mem = 536879269 peak = 910454784 sorting block 14, #reads = 1103479 mem = 536879319 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305827, 0, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 194, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (221.32, 106.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 809) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (285.41, 144.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 219, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 622) [M::mem_pestat] mean and std.dev: (227.65, 70.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 774) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724580 sequences (100000195 bp) in 2.054 CPU sec, 2.321 real sec... [M::process] read 724778 sequences (100000068 bp) in 1.675 CPU sec, 1.718 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305111, 10, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 159, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 444) [M::mem_pestat] mean and std.dev: (185.13, 62.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 541) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 265, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (288.09, 146.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (77, 116, 1016) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2894) [M::mem_pestat] mean and std.dev: (530.70, 727.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3833) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 277, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 618) [M::mem_pestat] mean and std.dev: (283.56, 65.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 744) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725046 reads in 197.780 CPU sec, 6.371 real sec [M::mem_process_seqs] Processed 725102 reads in 110.399 CPU sec, 3.540 real sec sorting block 15, #reads = 1102347 mem = 536880260 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305221, 4, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (113, 169, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1097) [M::mem_pestat] mean and std.dev: (230.58, 143.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1425) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (288.21, 145.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 304, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 574) [M::mem_pestat] mean and std.dev: (254.71, 77.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 697) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724606 sequences (100000086 bp) in 2.179 CPU sec, 2.321 real sec... [M::process] read 724240 sequences (100000001 bp) in 1.704 CPU sec, 1.706 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304841, 7, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 149, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 450) [M::mem_pestat] mean and std.dev: (167.67, 64.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 558) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (289.42, 147.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 206, 215) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (26, 341) [M::mem_pestat] mean and std.dev: (175.88, 29.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 404) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724580 reads in 192.958 CPU sec, 6.207 real sec [M::mem_process_seqs] Processed 724778 reads in 109.489 CPU sec, 3.504 real sec sorting block 16, #reads = 1101511 mem = 536877758 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305524, 5, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 224, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (52, 437) [M::mem_pestat] mean and std.dev: (217.20, 50.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 514) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (289.71, 146.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 225, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (208.14, 72.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 876) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724076 sequences (100000128 bp) in 2.008 CPU sec, 2.319 real sec... [M::process] read 723928 sequences (100000167 bp) in 1.938 CPU sec, 1.940 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305580, 5, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 216, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 557) [M::mem_pestat] mean and std.dev: (205.00, 67.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 685) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (289.27, 145.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 245, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 638) [M::mem_pestat] mean and std.dev: (229.88, 94.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 795) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724606 reads in 196.517 CPU sec, 6.327 real sec [M::mem_process_seqs] Processed 724240 reads in 109.551 CPU sec, 3.501 real sec sorting block 17, #reads = 1101458 mem = 536877405 peak = 910454784 sorting block 18, #reads = 1101620 mem = 536878241 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305269, 3, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 185, 599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1509) [M::mem_pestat] mean and std.dev: (346.47, 267.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1964) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (290.80, 146.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 213, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (240.85, 85.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 800) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723774 sequences (100000183 bp) in 2.112 CPU sec, 2.347 real sec... [M::process] read 723464 sequences (100000085 bp) in 1.680 CPU sec, 1.681 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305494, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (108, 116, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 597) [M::mem_pestat] mean and std.dev: (179.37, 88.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 760) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (290.72, 147.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 245, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (209.25, 69.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724076 reads in 191.538 CPU sec, 6.159 real sec [M::mem_process_seqs] Processed 723928 reads in 105.972 CPU sec, 3.374 real sec sorting block 19, #reads = 1101215 mem = 536880516 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305005, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 182, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (193.20, 79.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 645) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 271, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (293.90, 149.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1039) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (141, 157, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 453) [M::mem_pestat] mean and std.dev: (174.00, 65.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 557) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723424 sequences (100000010 bp) in 2.241 CPU sec, 2.598 real sec... [M::process] read 723164 sequences (100000259 bp) in 1.609 CPU sec, 1.618 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304875, 4, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 243, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (228.18, 85.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 830) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (296.49, 151.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1056) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 218, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 729) [M::mem_pestat] mean and std.dev: (226.11, 97.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 910) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723774 reads in 191.667 CPU sec, 6.161 real sec [M::mem_process_seqs] Processed 723464 reads in 107.509 CPU sec, 3.442 real sec sorting block 20, #reads = 1101153 mem = 536878854 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 305062, 5, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 194, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 592) [M::mem_pestat] mean and std.dev: (204.15, 70.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 733) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 274, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (295.77, 150.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 217, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (271.47, 142.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724458 sequences (100000120 bp) in 2.279 CPU sec, 2.477 real sec... [M::process] read 727566 sequences (100000082 bp) in 1.389 CPU sec, 1.396 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 304642, 5, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 217) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (181.33, 73.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (296.42, 149.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 177, 215) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (47, 327) [M::mem_pestat] mean and std.dev: (179.22, 50.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 383) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723424 reads in 189.017 CPU sec, 6.067 real sec [M::mem_process_seqs] Processed 723164 reads in 106.712 CPU sec, 3.421 real sec sorting block 21, #reads = 1101216 mem = 536878217 peak = 910454784 sorting block 22, #reads = 1100350 mem = 536877579 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 304907, 2, 31) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 179, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 502) [M::mem_pestat] mean and std.dev: (197.36, 77.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 620) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (291.83, 148.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1030) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 155, 211) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (159.34, 49.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727346 sequences (100000149 bp) in 2.090 CPU sec, 2.252 real sec... [M::process] read 726886 sequences (100000124 bp) in 1.477 CPU sec, 1.486 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 307017, 5, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 226, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (126, 356) [M::mem_pestat] mean and std.dev: (229.00, 40.82) [M::mem_pestat] low and high boundaries for proper pairs: (66, 402) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (279.81, 144.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 270, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 817) [M::mem_pestat] mean and std.dev: (255.14, 92.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724458 reads in 195.520 CPU sec, 6.279 real sec [M::mem_process_seqs] Processed 727566 reads in 110.320 CPU sec, 3.525 real sec sorting block 23, #reads = 1101163 mem = 536877902 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306971, 2, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (124, 154, 226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 430) [M::mem_pestat] mean and std.dev: (163.68, 54.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 532) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 256, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 779) [M::mem_pestat] mean and std.dev: (279.53, 143.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 983) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 250, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (288.73, 128.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726268 sequences (100000135 bp) in 2.046 CPU sec, 2.188 real sec... [M::process] read 725926 sequences (100000257 bp) in 1.729 CPU sec, 1.739 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 306119, 4, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 183, 235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 435) [M::mem_pestat] mean and std.dev: (184.17, 62.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 535) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 794) [M::mem_pestat] mean and std.dev: (283.08, 145.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 181, 240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 426) [M::mem_pestat] mean and std.dev: (185.26, 61.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 519) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727346 reads in 196.427 CPU sec, 6.302 real sec [M::mem_process_seqs] Processed 726886 reads in 111.706 CPU sec, 3.570 real sec sorting block 24, #reads = 1104455 mem = 536880123 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 306152, 3, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 210, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 606) [M::mem_pestat] mean and std.dev: (228.40, 78.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 749) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (283.62, 145.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 191, 291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 555) [M::mem_pestat] mean and std.dev: (208.96, 79.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 687) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725578 sequences (100000211 bp) in 2.260 CPU sec, 2.420 real sec... [M::process] read 725318 sequences (100000177 bp) in 1.495 CPU sec, 1.504 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305837, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 252, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (270.65, 109.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 261, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (284.37, 145.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 159, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 556) [M::mem_pestat] mean and std.dev: (176.83, 69.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 702) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726268 reads in 192.594 CPU sec, 6.209 real sec [M::mem_process_seqs] Processed 725926 reads in 103.964 CPU sec, 3.347 real sec sorting block 25, #reads = 1103255 mem = 536879300 peak = 910454784 sorting block 26, #reads = 1102972 mem = 536879411 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306336, 2, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (123, 155, 214) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 396) [M::mem_pestat] mean and std.dev: (151.06, 48.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 487) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 262, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (284.59, 144.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 209, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (261.46, 154.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1052) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724676 sequences (100000206 bp) in 2.370 CPU sec, 2.554 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305865, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (119, 170, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 359) [M::mem_pestat] mean and std.dev: (157.58, 60.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 439) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 265, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (287.73, 146.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 194, 293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 591) [M::mem_pestat] mean and std.dev: (216.92, 89.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 740) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724746 sequences (100000199 bp) in 1.741 CPU sec, 1.748 real sec... [M::mem_process_seqs] Processed 725578 reads in 168.522 CPU sec, 5.394 real sec [M::mem_process_seqs] Processed 725318 reads in 98.478 CPU sec, 3.143 real sec sorting block 27, #reads = 1102956 mem = 536879578 peak = 910454784 [M::process] read 724578 sequences (100000283 bp) in 2.317 CPU sec, 2.521 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 305129, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 194, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 507) [M::mem_pestat] mean and std.dev: (189.67, 53.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 624) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (289.25, 147.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 208, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (210.50, 86.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724088 sequences (100000194 bp) in 1.777 CPU sec, 1.784 real sec... [M::mem_process_seqs] Processed 724746 reads in 95.219 CPU sec, 3.013 real sec sorting block 28, #reads = 1101757 mem = 536879593 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305840, 4, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 210, 227) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (183.88, 52.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 473) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (288.44, 146.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 230, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 528) [M::mem_pestat] mean and std.dev: (256.06, 120.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 736) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 305269, 8, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 216, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 699) [M::mem_pestat] mean and std.dev: (246.72, 84.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 875) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 266, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (288.39, 145.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 724676 reads in 264.407 CPU sec, 8.482 real sec [M::process] read 723986 sequences (100000275 bp) in 1.727 CPU sec, 1.858 real sec... [M::mem_process_seqs] Processed 724578 reads in 110.298 CPU sec, 3.567 real sec sorting block 29, #reads = 1101849 mem = 536879938 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305353, 5, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 374, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 960) [M::mem_pestat] mean and std.dev: (247.40, 120.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1227) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (290.57, 147.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 216, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 457) [M::mem_pestat] mean and std.dev: (232.16, 109.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 668) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724368 sequences (100000020 bp) in 2.560 CPU sec, 2.757 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305133, 4, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 281, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (267.74, 122.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1010) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (291.50, 147.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1026) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 179, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 489) [M::mem_pestat] mean and std.dev: (204.00, 92.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 604) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724088 reads in 172.657 CPU sec, 5.545 real sec [M::process] read 723978 sequences (100000130 bp) in 1.736 CPU sec, 1.749 real sec... [M::mem_process_seqs] Processed 723986 reads in 99.422 CPU sec, 3.147 real sec sorting block 30, #reads = 1101605 mem = 536879162 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 304931, 2, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 201, 231) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 393) [M::mem_pestat] mean and std.dev: (193.91, 53.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 474) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 818) [M::mem_pestat] mean and std.dev: (291.60, 148.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1033) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (132, 197, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (189.50, 81.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 968) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723816 sequences (100000277 bp) in 2.850 CPU sec, 3.110 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 304929, 4, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (105, 127, 149) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (17, 237) [M::mem_pestat] mean and std.dev: (124.77, 33.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 281) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 822) [M::mem_pestat] mean and std.dev: (293.52, 149.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1038) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 171, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 531) [M::mem_pestat] mean and std.dev: (199.18, 70.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 655) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724368 reads in 170.721 CPU sec, 5.459 real sec [M::mem_process_seqs] Processed 723978 reads in 99.985 CPU sec, 3.179 real sec [M::process] read 723276 sequences (100000172 bp) in 2.398 CPU sec, 2.466 real sec... sorting block 31, #reads = 1101222 mem = 536879064 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305052, 1, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 231, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 509) [M::mem_pestat] mean and std.dev: (204.22, 83.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 631) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (292.56, 148.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1030) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 167, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 469) [M::mem_pestat] mean and std.dev: (182.44, 55.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 576) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 32, #reads = 1101074 mem = 536879529 peak = 910454784 [M::process] read 723084 sequences (100000080 bp) in 2.014 CPU sec, 2.179 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304486, 6, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 178, 232) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 414) [M::mem_pestat] mean and std.dev: (166.25, 42.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 505) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (294.52, 148.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 219, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (226.20, 83.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 879) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725940 sequences (100000119 bp) in 1.734 CPU sec, 1.784 real sec... [M::mem_process_seqs] Processed 723816 reads in 174.779 CPU sec, 5.612 real sec [M::mem_process_seqs] Processed 723276 reads in 99.456 CPU sec, 3.169 real sec sorting block 33, #reads = 1101129 mem = 536880235 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 304807, 8, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 266, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 610) [M::mem_pestat] mean and std.dev: (242.00, 109.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 745) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 834) [M::mem_pestat] mean and std.dev: (297.63, 151.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1053) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (124, 140, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 376) [M::mem_pestat] mean and std.dev: (145.25, 38.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 460) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727838 sequences (100000177 bp) in 2.552 CPU sec, 2.733 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305910, 10, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 193, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 480) [M::mem_pestat] mean and std.dev: (204.92, 64.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 587) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 727246 sequences (100000160 bp) in 1.659 CPU sec, 1.730 real sec... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (286.87, 147.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (71, 73, 2968) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8762) [M::mem_pestat] mean and std.dev: (996.30, 1302.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11659) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 193, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 949) [M::mem_pestat] mean and std.dev: (263.33, 185.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1207) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723084 reads in 172.703 CPU sec, 5.525 real sec [M::mem_process_seqs] Processed 725940 reads in 100.897 CPU sec, 3.218 real sec sorting block 34, #reads = 1100197 mem = 536880784 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 306609, 7, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (120, 263, 288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 624) [M::mem_pestat] mean and std.dev: (187.08, 80.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 792) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (279.61, 143.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (139, 225, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (238.69, 153.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 967) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726270 sequences (100000006 bp) in 2.211 CPU sec, 2.426 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306880, 7, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 197, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 582) [M::mem_pestat] mean and std.dev: (221.50, 79.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 720) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (281.03, 144.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 211, 302) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 532) [M::mem_pestat] mean and std.dev: (203.46, 66.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726142 sequences (100000198 bp) in 1.784 CPU sec, 1.785 real sec... [M::mem_process_seqs] Processed 727838 reads in 174.190 CPU sec, 5.590 real sec [M::mem_process_seqs] Processed 727246 reads in 101.024 CPU sec, 3.215 real sec sorting block 35, #reads = 1103053 mem = 536878392 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305908, 6, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 180, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 778) [M::mem_pestat] mean and std.dev: (231.55, 132.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (283.53, 144.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 174, 189) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (69, 269) [M::mem_pestat] mean and std.dev: (168.18, 37.09) [M::mem_pestat] low and high boundaries for proper pairs: (20, 317) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 36, #reads = 1104044 mem = 536879337 peak = 910454784 [M::process] read 725858 sequences (100000202 bp) in 2.605 CPU sec, 2.890 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305742, 5, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 206, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 491) [M::mem_pestat] mean and std.dev: (188.12, 74.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 607) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (283.28, 144.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 993) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 219, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (11, 431) [M::mem_pestat] mean and std.dev: (213.67, 47.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 515) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724894 sequences (100000165 bp) in 1.783 CPU sec, 1.791 real sec... [M::mem_process_seqs] Processed 726270 reads in 180.323 CPU sec, 5.806 real sec [M::mem_process_seqs] Processed 726142 reads in 102.774 CPU sec, 3.269 real sec sorting block 37, #reads = 1103195 mem = 536878446 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306332, 4, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (112, 151, 198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 370) [M::mem_pestat] mean and std.dev: (150.60, 52.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 456) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (285.62, 146.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1006) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 255, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (246.00, 90.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 806) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724668 sequences (100000131 bp) in 2.633 CPU sec, 2.997 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305839, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 254, 269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 543) [M::mem_pestat] mean and std.dev: (204.12, 87.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 680) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 264, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (285.78, 144.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 996) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 178, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 556) [M::mem_pestat] mean and std.dev: (195.69, 77.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 694) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725858 reads in 174.336 CPU sec, 5.585 real sec [M::mem_process_seqs] Processed 724894 reads in 101.145 CPU sec, 3.197 real sec [M::process] read 724354 sequences (100000073 bp) in 1.887 CPU sec, 1.930 real sec... sorting block 38, #reads = 1103118 mem = 536879392 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 305285, 4, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 178, 304) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 634) [M::mem_pestat] mean and std.dev: (184.11, 73.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 799) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 265, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (287.92, 146.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1008) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (139, 175, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 625) [M::mem_pestat] mean and std.dev: (213.00, 100.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 787) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724306 sequences (100000211 bp) in 2.440 CPU sec, 2.785 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305213, 5, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 212, 299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 531) [M::mem_pestat] mean and std.dev: (215.47, 69.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 266, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (288.78, 146.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 244, 285) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 523) [M::mem_pestat] mean and std.dev: (219.00, 57.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724218 sequences (100000109 bp) in 1.729 CPU sec, 1.730 real sec... [M::mem_process_seqs] Processed 724668 reads in 175.963 CPU sec, 5.660 real sec [M::mem_process_seqs] Processed 724354 reads in 102.118 CPU sec, 3.283 real sec sorting block 39, #reads = 1102140 mem = 536878291 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305216, 5, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 262, 304) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (207.26, 73.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (289.56, 146.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 225, 269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 483) [M::mem_pestat] mean and std.dev: (216.78, 72.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 590) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 40, #reads = 1101479 mem = 536879305 peak = 910454784 [M::process] read 723678 sequences (100000033 bp) in 2.512 CPU sec, 2.804 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 304962, 8, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 268, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (228.30, 89.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 268, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (290.55, 146.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 271, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (252.71, 87.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 860) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724306 reads in 177.331 CPU sec, 5.703 real sec [M::process] read 724036 sequences (100000225 bp) in 1.674 CPU sec, 1.681 real sec... [M::mem_process_seqs] Processed 724218 reads in 101.794 CPU sec, 3.240 real sec sorting block 41, #reads = 1101517 mem = 536879384 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305122, 6, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 185, 274) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (212.86, 90.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 646) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 270, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 817) [M::mem_pestat] mean and std.dev: (292.68, 148.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1031) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 170, 238) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 412) [M::mem_pestat] mean and std.dev: (180.69, 53.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 499) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723900 sequences (100000275 bp) in 2.692 CPU sec, 2.892 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305423, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 256, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1054) [M::mem_pestat] mean and std.dev: (238.60, 98.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1336) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (292.67, 148.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1030) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 230, 239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 425) [M::mem_pestat] mean and std.dev: (199.17, 59.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 518) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723678 reads in 174.526 CPU sec, 5.599 real sec [M::process] read 723596 sequences (100000060 bp) in 1.809 CPU sec, 1.823 real sec... [M::mem_process_seqs] Processed 724036 reads in 100.409 CPU sec, 3.242 real sec sorting block 42, #reads = 1101397 mem = 536878531 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 305611, 5, 26) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (290.69, 146.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 204, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (196.35, 64.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] skip orientation RR [M::process] read 723248 sequences (100000017 bp) in 2.613 CPU sec, 2.885 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 304828, 2, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 155, 185) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (14, 299) [M::mem_pestat] mean and std.dev: (157.23, 43.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 356) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 271, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (292.41, 147.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1023) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 157, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (194.17, 99.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723900 reads in 175.769 CPU sec, 5.664 real sec [M::mem_process_seqs] Processed 723596 reads in 102.555 CPU sec, 3.255 real sec [M::process] read 723280 sequences (100000031 bp) in 1.679 CPU sec, 1.704 real sec... sorting block 43, #reads = 1101665 mem = 536879998 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304470, 5, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (118, 194, 957) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2635) [M::mem_pestat] mean and std.dev: (261.36, 286.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3474) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (294.30, 148.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (124, 151, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 490) [M::mem_pestat] mean and std.dev: (180.65, 77.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722872 sequences (100000198 bp) in 2.548 CPU sec, 2.791 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 303701, 5, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 179, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (223.71, 105.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1110) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (295.32, 149.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 178, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (181.67, 58.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 602) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723248 reads in 177.524 CPU sec, 5.726 real sec sorting block 44, #reads = 1101101 mem = 536880599 peak = 910454784 [M::mem_process_seqs] Processed 723280 reads in 104.222 CPU sec, 3.338 real sec [M::process] read 727440 sequences (100000252 bp) in 2.356 CPU sec, 2.452 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 304281, 4, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 143, 281) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 587) [M::mem_pestat] mean and std.dev: (171.90, 69.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 740) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 835) [M::mem_pestat] mean and std.dev: (298.21, 150.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1054) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 196, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 370) [M::mem_pestat] mean and std.dev: (177.30, 49.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 446) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 45, #reads = 1100317 mem = 536880536 peak = 910454784 [M::process] read 727982 sequences (100000048 bp) in 2.482 CPU sec, 2.716 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 306766, 3, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 203, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 558) [M::mem_pestat] mean and std.dev: (193.00, 68.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 689) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 259, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (283.68, 146.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 170, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 436) [M::mem_pestat] mean and std.dev: (176.50, 44.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 531) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722872 reads in 179.722 CPU sec, 5.771 real sec [M::mem_process_seqs] Processed 727440 reads in 103.947 CPU sec, 3.302 real sec [M::process] read 726940 sequences (100000119 bp) in 1.814 CPU sec, 1.859 real sec... sorting block 46, #reads = 1100139 mem = 536880545 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 307029, 2, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 212, 934) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2482) [M::mem_pestat] mean and std.dev: (315.67, 279.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3256) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 256, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (281.30, 146.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 245, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 643) [M::mem_pestat] mean and std.dev: (231.94, 94.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 792) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726418 sequences (100000077 bp) in 2.782 CPU sec, 3.133 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306780, 3, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 193, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (193.22, 80.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (283.34, 146.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 194, 299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 593) [M::mem_pestat] mean and std.dev: (204.00, 69.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 740) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727982 reads in 176.436 CPU sec, 5.659 real sec [M::mem_process_seqs] Processed 726940 reads in 102.223 CPU sec, 3.245 real sec [M::process] read 726062 sequences (100000089 bp) in 1.886 CPU sec, 1.924 real sec... sorting block 47, #reads = 1104179 mem = 536878110 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 306096, 1, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 214, 1641) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4609) [M::mem_pestat] mean and std.dev: (547.43, 633.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6093) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 798) [M::mem_pestat] mean and std.dev: (284.44, 146.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1008) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 211, 311) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 595) [M::mem_pestat] mean and std.dev: (237.04, 104.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 737) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725884 sequences (100000034 bp) in 2.487 CPU sec, 2.722 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306448, 3, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 203, 215) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (80, 305) [M::mem_pestat] mean and std.dev: (188.50, 40.01) [M::mem_pestat] low and high boundaries for proper pairs: (28, 350) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (283.06, 144.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 993) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 189, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (188.06, 69.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 958) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726418 reads in 179.457 CPU sec, 5.752 real sec sorting block 48, #reads = 1104032 mem = 536878956 peak = 910454784 [M::mem_process_seqs] Processed 726062 reads in 103.033 CPU sec, 3.260 real sec [M::process] read 725970 sequences (100000088 bp) in 2.008 CPU sec, 2.040 real sec... sorting block 49, #reads = 1103155 mem = 536878770 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305738, 5, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (119, 188, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 602) [M::mem_pestat] mean and std.dev: (188.10, 90.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 763) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 778) [M::mem_pestat] mean and std.dev: (281.52, 142.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 981) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (114, 180, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (167.35, 72.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725252 sequences (100000110 bp) in 2.536 CPU sec, 2.773 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306024, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 155, 192) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (27, 302) [M::mem_pestat] mean and std.dev: (157.50, 31.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 357) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (282.34, 143.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 989) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 337, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 853) [M::mem_pestat] mean and std.dev: (264.93, 138.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1090) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725884 reads in 173.591 CPU sec, 5.592 real sec [M::process] read 725244 sequences (100000144 bp) in 1.728 CPU sec, 1.730 real sec... [M::mem_process_seqs] Processed 725970 reads in 100.539 CPU sec, 3.230 real sec sorting block 50, #reads = 1103039 mem = 536876806 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305441, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 184, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 374) [M::mem_pestat] mean and std.dev: (184.47, 52.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 451) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (287.11, 146.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 150, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 543) [M::mem_pestat] mean and std.dev: (177.29, 67.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 682) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724648 sequences (100000245 bp) in 2.589 CPU sec, 2.908 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305402, 1, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 261, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 585) [M::mem_pestat] mean and std.dev: (231.69, 66.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 726) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (288.31, 147.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1023) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 204, 241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 415) [M::mem_pestat] mean and std.dev: (212.59, 75.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 514) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725252 reads in 177.743 CPU sec, 5.727 real sec [M::mem_process_seqs] Processed 725244 reads in 103.055 CPU sec, 3.276 real sec [M::process] read 724918 sequences (100000136 bp) in 2.211 CPU sec, 2.290 real sec... sorting block 51, #reads = 1102604 mem = 536879141 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305073, 4, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 168, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (181.23, 65.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 859) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 264, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (286.47, 145.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 178, 292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 558) [M::mem_pestat] mean and std.dev: (196.22, 63.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 691) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724470 sequences (100000097 bp) in 2.394 CPU sec, 2.707 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305581, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 233, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 695) [M::mem_pestat] mean and std.dev: (219.94, 87.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 874) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (288.16, 146.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (140, 182, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 458) [M::mem_pestat] mean and std.dev: (190.69, 77.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 564) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724648 reads in 180.897 CPU sec, 5.831 real sec [M::mem_process_seqs] Processed 724918 reads in 104.515 CPU sec, 3.331 real sec sorting block 52, #reads = 1101621 mem = 536879663 peak = 910454784 [M::process] read 724502 sequences (100000100 bp) in 1.961 CPU sec, 1.997 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305336, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 224, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 682) [M::mem_pestat] mean and std.dev: (203.79, 76.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 862) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (290.29, 148.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1025) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 228, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (261.77, 84.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 53, #reads = 1101589 mem = 536877329 peak = 910454784 [M::process] read 724478 sequences (100000194 bp) in 2.598 CPU sec, 2.963 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 306053, 7, 15) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (288.67, 146.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 251, 451) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (287.23, 202.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1273) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724470 reads in 181.137 CPU sec, 5.848 real sec [M::mem_process_seqs] Processed 724502 reads in 103.879 CPU sec, 3.321 real sec [M::process] read 724184 sequences (100000221 bp) in 1.983 CPU sec, 2.034 real sec... sorting block 54, #reads = 1101978 mem = 536877799 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 305461, 6, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 179, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 434) [M::mem_pestat] mean and std.dev: (193.25, 82.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 534) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 818) [M::mem_pestat] mean and std.dev: (291.40, 149.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1033) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 187, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (95, 270) [M::mem_pestat] mean and std.dev: (180.50, 31.43) [M::mem_pestat] low and high boundaries for proper pairs: (55, 306) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723912 sequences (100000069 bp) in 3.165 CPU sec, 3.515 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 304962, 3, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 172, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 380) [M::mem_pestat] mean and std.dev: (160.81, 42.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 460) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (292.09, 148.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1037) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 194, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (42, 377) [M::mem_pestat] mean and std.dev: (207.90, 67.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 478) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724478 reads in 183.242 CPU sec, 5.882 real sec [M::mem_process_seqs] Processed 724184 reads in 107.257 CPU sec, 3.419 real sec [M::process] read 723952 sequences (100000089 bp) in 2.529 CPU sec, 2.671 real sec... sorting block 55, #reads = 1102189 mem = 536878339 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 304938, 2, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 165, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 506) [M::mem_pestat] mean and std.dev: (196.13, 86.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 634) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (294.51, 151.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1050) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 187, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (213.82, 86.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 643) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725540 sequences (100000045 bp) in 2.566 CPU sec, 2.909 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 304591, 2, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (113, 153, 277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 605) [M::mem_pestat] mean and std.dev: (169.06, 70.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 769) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 272, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 841) [M::mem_pestat] mean and std.dev: (296.80, 152.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1063) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 212, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (272.00, 176.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 978) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723912 reads in 182.295 CPU sec, 5.887 real sec [M::mem_process_seqs] Processed 723952 reads in 105.230 CPU sec, 3.350 real sec sorting block 56, #reads = 1100925 mem = 536880594 peak = 910454784 [M::process] read 728494 sequences (100000043 bp) in 2.494 CPU sec, 2.661 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305747, 2, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 187, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 455) [M::mem_pestat] mean and std.dev: (182.15, 55.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 555) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 265, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (291.92, 152.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1054) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 237, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 927) [M::mem_pestat] mean and std.dev: (234.20, 106.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1180) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 57, #reads = 1101023 mem = 536877750 peak = 910454784 [M::process] read 728244 sequences (100000256 bp) in 2.980 CPU sec, 3.398 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 307132, 6, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 189, 221) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (176.39, 51.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 467) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (278.47, 144.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 725540 reads in 181.430 CPU sec, 5.869 real sec [M::mem_process_seqs] Processed 728494 reads in 106.069 CPU sec, 3.396 real sec [M::process] read 727762 sequences (100000001 bp) in 2.949 CPU sec, 3.239 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 307421, 2, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 190, 198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (27, 312) [M::mem_pestat] mean and std.dev: (176.89, 48.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 371) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 254, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 794) [M::mem_pestat] mean and std.dev: (280.27, 146.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 163, 274) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 586) [M::mem_pestat] mean and std.dev: (159.09, 53.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 742) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 58, #reads = 1102405 mem = 536880495 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 306902, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 203, 225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 413) [M::mem_pestat] mean and std.dev: (190.71, 61.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 507) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 255, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 798) [M::mem_pestat] mean and std.dev: (281.94, 147.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 196, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (2, 407) [M::mem_pestat] mean and std.dev: (211.07, 53.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 488) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728244 reads in 176.735 CPU sec, 5.742 real sec [M::process] read 727068 sequences (100000121 bp) in 2.887 CPU sec, 3.206 real sec... [M::mem_process_seqs] Processed 727762 reads in 100.967 CPU sec, 3.258 real sec sorting block 59, #reads = 1105024 mem = 536881022 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 306787, 4, 18) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (281.98, 145.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 181, 240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 418) [M::mem_pestat] mean and std.dev: (186.81, 59.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 507) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727068 reads in 91.203 CPU sec, 3.070 real sec [M::process] read 726266 sequences (100000273 bp) in 3.439 CPU sec, 3.826 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306068, 3, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 200, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (25, 420) [M::mem_pestat] mean and std.dev: (212.36, 71.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 499) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (281.87, 143.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (115, 170, 221) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 433) [M::mem_pestat] mean and std.dev: (168.75, 70.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 539) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 60, #reads = 1104622 mem = 536878807 peak = 910454784 [M::mem_process_seqs] Processed 726266 reads in 94.262 CPU sec, 3.154 real sec [M::process] read 726212 sequences (100000104 bp) in 3.096 CPU sec, 3.369 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305941, 2, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 195, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 356) [M::mem_pestat] mean and std.dev: (167.25, 55.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 434) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 780) [M::mem_pestat] mean and std.dev: (281.09, 142.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 984) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 191, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 445) [M::mem_pestat] mean and std.dev: (202.27, 57.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 541) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726212 reads in 93.858 CPU sec, 3.142 real sec [M::process] read 726016 sequences (100000224 bp) in 2.984 CPU sec, 3.278 real sec... sorting block 61, #reads = 1103596 mem = 536877846 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305510, 12, 5) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (114, 124, 214) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 414) [M::mem_pestat] mean and std.dev: (158.87, 74.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 514) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (283.27, 144.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (36, 56, 183) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 477) [M::mem_pestat] mean and std.dev: (54.30, 45.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 624) [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_process_seqs] Processed 726016 reads in 93.471 CPU sec, 3.191 real sec [M::process] read 725952 sequences (100000198 bp) in 3.196 CPU sec, 3.511 real sec... sorting block 62, #reads = 1102256 mem = 536879794 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305713, 0, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 237, 269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 489) [M::mem_pestat] mean and std.dev: (201.47, 54.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 599) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (285.32, 146.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 211, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (190.50, 65.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 611) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725952 reads in 93.238 CPU sec, 3.108 real sec [M::process] read 725540 sequences (100000134 bp) in 2.938 CPU sec, 3.305 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305890, 3, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 203, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1589) [M::mem_pestat] mean and std.dev: (240.53, 161.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2070) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (285.59, 145.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1006) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 253, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 534) [M::mem_pestat] mean and std.dev: (221.45, 70.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 661) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725540 reads in 91.736 CPU sec, 3.026 real sec sorting block 63, #reads = 1102369 mem = 536878457 peak = 910454784 [M::process] read 725612 sequences (100000141 bp) in 3.057 CPU sec, 3.495 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306612, 3, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 178, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 394) [M::mem_pestat] mean and std.dev: (172.65, 51.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (287.53, 147.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 236, 269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 475) [M::mem_pestat] mean and std.dev: (198.07, 54.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 578) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725612 reads in 90.570 CPU sec, 3.019 real sec [M::process] read 725520 sequences (100000027 bp) in 2.866 CPU sec, 3.137 real sec... sorting block 64, #reads = 1102109 mem = 536879646 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 305806, 2, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 175, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 384) [M::mem_pestat] mean and std.dev: (180.85, 54.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (288.21, 148.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1026) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 313, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 590) [M::mem_pestat] mean and std.dev: (252.82, 86.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 717) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725520 reads in 93.742 CPU sec, 3.096 real sec [M::process] read 725750 sequences (100000078 bp) in 3.036 CPU sec, 3.393 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305991, 2, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (226, 259, 288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (102, 412) [M::mem_pestat] mean and std.dev: (250.33, 54.88) [M::mem_pestat] low and high boundaries for proper pairs: (31, 474) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (287.90, 148.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 249, 293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 533) [M::mem_pestat] mean and std.dev: (255.29, 112.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 704) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725750 reads in 92.409 CPU sec, 3.054 real sec [M::process] read 725238 sequences (100000067 bp) in 2.802 CPU sec, 3.071 real sec... sorting block 65, #reads = 1102798 mem = 536877780 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305663, 3, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 268, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 769) [M::mem_pestat] mean and std.dev: (252.87, 92.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 965) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (289.37, 149.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 194, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1063) [M::mem_pestat] mean and std.dev: (310.95, 249.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1368) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725238 reads in 94.631 CPU sec, 3.140 real sec [M::process] read 725062 sequences (100000216 bp) in 2.950 CPU sec, 3.278 real sec... sorting block 66, #reads = 1102423 mem = 536879571 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305598, 5, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 251, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (219.36, 81.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 803) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 267, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (290.65, 149.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1035) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 227, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (33, 428) [M::mem_pestat] mean and std.dev: (225.04, 62.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 507) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725062 reads in 92.143 CPU sec, 3.135 real sec [M::process] read 724834 sequences (100000115 bp) in 2.850 CPU sec, 3.168 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305602, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 194, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (208.78, 88.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 835) [M::mem_pestat] mean and std.dev: (293.81, 152.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1056) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 218, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 500) [M::mem_pestat] mean and std.dev: (204.40, 69.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724834 reads in 95.294 CPU sec, 3.183 real sec [M::process] read 724716 sequences (100000094 bp) in 3.006 CPU sec, 3.298 real sec... sorting block 67, #reads = 1102017 mem = 536880051 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305577, 4, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 180, 244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 428) [M::mem_pestat] mean and std.dev: (207.08, 80.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 531) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 269, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (294.32, 152.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1060) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 217, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (244.81, 102.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725338 sequences (100000264 bp) in 2.782 CPU sec, 3.031 real sec... [M::mem_process_seqs] Processed 724716 reads in 92.907 CPU sec, 3.172 real sec sorting block 68, #reads = 1102239 mem = 536881126 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305637, 7, 30) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 245, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 441) [M::mem_pestat] mean and std.dev: (218.25, 68.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 532) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 266, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 843) [M::mem_pestat] mean and std.dev: (294.04, 154.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1067) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (123, 182, 225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 429) [M::mem_pestat] mean and std.dev: (177.43, 54.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 531) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 729080 sequences (100000050 bp) in 2.897 CPU sec, 3.156 real sec... [M::mem_process_seqs] Processed 725338 reads in 94.339 CPU sec, 3.181 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 307201, 2, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (114, 157, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 372) [M::mem_pestat] mean and std.dev: (150.00, 44.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 458) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 252, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (277.75, 144.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 204, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (24, 389) [M::mem_pestat] mean and std.dev: (205.50, 57.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 462) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727994 sequences (100000240 bp) in 2.912 CPU sec, 3.157 real sec... [M::mem_process_seqs] Processed 729080 reads in 93.980 CPU sec, 3.134 real sec sorting block 69, #reads = 1101606 mem = 536876577 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 306824, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 231, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 846) [M::mem_pestat] mean and std.dev: (247.44, 141.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1079) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 255, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (280.33, 145.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (133, 211, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 547) [M::mem_pestat] mean and std.dev: (210.36, 81.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 685) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727622 sequences (100000145 bp) in 2.688 CPU sec, 2.942 real sec... [M::mem_process_seqs] Processed 727994 reads in 92.817 CPU sec, 3.138 real sec sorting block 70, #reads = 1105273 mem = 536878893 peak = 910454784 [M::process] read 727148 sequences (100000161 bp) in 2.576 CPU sec, 2.850 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 306672, 4, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 234, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 588) [M::mem_pestat] mean and std.dev: (243.08, 75.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 715) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (280.87, 145.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 998) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 253, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 610) [M::mem_pestat] mean and std.dev: (222.56, 80.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 760) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726458 sequences (100000137 bp) in 2.455 CPU sec, 2.616 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306661, 6, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 157, 207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 365) [M::mem_pestat] mean and std.dev: (170.76, 55.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 444) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 256, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (281.43, 145.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 195, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 635) [M::mem_pestat] mean and std.dev: (204.00, 81.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 790) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727622 reads in 177.384 CPU sec, 5.702 real sec [M::mem_process_seqs] Processed 727148 reads in 102.224 CPU sec, 3.290 real sec [M::process] read 726330 sequences (100000100 bp) in 2.484 CPU sec, 2.628 real sec... sorting block 71, #reads = 1104559 mem = 536879455 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306101, 2, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 220, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 512) [M::mem_pestat] mean and std.dev: (223.06, 80.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 257, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (281.67, 144.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 193, 226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 390) [M::mem_pestat] mean and std.dev: (191.09, 54.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 472) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726502 sequences (100000182 bp) in 2.738 CPU sec, 3.060 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 306459, 6, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 232, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (250.43, 118.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (281.37, 143.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (128, 156, 174) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (36, 266) [M::mem_pestat] mean and std.dev: (143.58, 32.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 312) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726458 reads in 177.870 CPU sec, 5.790 real sec [M::mem_process_seqs] Processed 726330 reads in 102.724 CPU sec, 3.333 real sec sorting block 72, #reads = 1103698 mem = 536880142 peak = 910454784 [M::process] read 726180 sequences (100000188 bp) in 2.736 CPU sec, 3.026 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 306285, 8, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (110, 156, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (154.17, 76.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (282.49, 144.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 996) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 182, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (2, 337) [M::mem_pestat] mean and std.dev: (177.50, 57.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 407) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 73, #reads = 1103498 mem = 536880329 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 305894, 2, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 176, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (178.10, 69.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (283.93, 145.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (113, 186, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 563) [M::mem_pestat] mean and std.dev: (197.65, 107.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 713) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726118 sequences (100000266 bp) in 2.584 CPU sec, 2.767 real sec... [M::mem_process_seqs] Processed 726502 reads in 178.708 CPU sec, 5.813 real sec [M::process] read 725840 sequences (100000135 bp) in 2.518 CPU sec, 2.734 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 305939, 6, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (121, 182, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 460) [M::mem_pestat] mean and std.dev: (178.90, 67.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 573) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 261, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (284.60, 145.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 213, 553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1307) [M::mem_pestat] mean and std.dev: (278.89, 176.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1684) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726118 reads in 95.738 CPU sec, 3.055 real sec sorting block 74, #reads = 1103245 mem = 536880510 peak = 910454784 [M::process] read 725244 sequences (100000261 bp) in 2.613 CPU sec, 2.809 real sec... [M::mem_process_seqs] Processed 726180 reads in 275.826 CPU sec, 8.843 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305991, 3, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 166, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (52, 297) [M::mem_pestat] mean and std.dev: (167.50, 31.26) [M::mem_pestat] low and high boundaries for proper pairs: (3, 346) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (286.51, 147.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 200, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (231.06, 105.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 894) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 75, #reads = 1102707 mem = 536881315 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305280, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 181, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 382) [M::mem_pestat] mean and std.dev: (172.94, 57.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 464) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (287.20, 146.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 205, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (204.54, 83.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725388 sequences (100000120 bp) in 2.723 CPU sec, 2.948 real sec... [M::mem_process_seqs] Processed 725840 reads in 190.061 CPU sec, 6.091 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305704, 2, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 208, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 507) [M::mem_pestat] mean and std.dev: (222.38, 87.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (286.91, 146.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 259, 272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 502) [M::mem_pestat] mean and std.dev: (238.11, 101.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725418 sequences (100000222 bp) in 2.815 CPU sec, 3.043 real sec... [M::mem_process_seqs] Processed 725388 reads in 93.526 CPU sec, 3.023 real sec sorting block 76, #reads = 1102632 mem = 536878966 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (31, 305910, 5, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 202, 1090) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2974) [M::mem_pestat] mean and std.dev: (432.67, 464.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3916) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (288.35, 148.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 257, 1507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4161) [M::mem_pestat] mean and std.dev: (630.75, 658.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5488) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725418 reads in 91.789 CPU sec, 2.986 real sec [M::mem_process_seqs] Processed 725244 reads in 289.929 CPU sec, 9.735 real sec [M::process] read 724954 sequences (100000216 bp) in 3.338 CPU sec, 3.630 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 305269, 8, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 200, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 458) [M::mem_pestat] mean and std.dev: (217.17, 89.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 576) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (291.01, 149.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 241, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 597) [M::mem_pestat] mean and std.dev: (214.58, 75.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 744) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724954 reads in 88.336 CPU sec, 2.983 real sec sorting block 77, #reads = 1102235 mem = 536881650 peak = 910454784 [M::process] read 724872 sequences (100000171 bp) in 3.432 CPU sec, 3.785 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305139, 8, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (124, 133, 226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 430) [M::mem_pestat] mean and std.dev: (153.16, 48.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 532) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (291.96, 150.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 168, 211) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (13, 343) [M::mem_pestat] mean and std.dev: (158.00, 56.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 409) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 78, #reads = 1102220 mem = 536877504 peak = 910454784 [M::mem_process_seqs] Processed 724872 reads in 94.004 CPU sec, 3.131 real sec [M::process] read 724436 sequences (100000141 bp) in 2.914 CPU sec, 3.155 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305074, 8, 7) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 193, 272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 534) [M::mem_pestat] mean and std.dev: (191.72, 70.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 665) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (292.68, 150.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 724436 reads in 92.078 CPU sec, 3.055 real sec [M::process] read 724610 sequences (100000033 bp) in 3.082 CPU sec, 3.374 real sec... sorting block 79, #reads = 1101593 mem = 536878957 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305242, 4, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 177, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (16, 336) [M::mem_pestat] mean and std.dev: (170.07, 44.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 400) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 269, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 844) [M::mem_pestat] mean and std.dev: (295.61, 154.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1068) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 201, 219) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 367) [M::mem_pestat] mean and std.dev: (193.45, 50.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724610 reads in 90.665 CPU sec, 3.010 real sec [M::process] read 729414 sequences (100000168 bp) in 3.240 CPU sec, 3.560 real sec... sorting block 80, #reads = 1101290 mem = 536878591 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 307506, 2, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 196, 281) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 537) [M::mem_pestat] mean and std.dev: (190.62, 59.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 665) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 250, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (277.11, 145.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (101, 125, 188) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 362) [M::mem_pestat] mean and std.dev: (143.35, 63.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 449) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 729414 reads in 86.661 CPU sec, 2.865 real sec [M::process] read 728150 sequences (100000226 bp) in 2.978 CPU sec, 3.257 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 306708, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 209, 225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (102, 307) [M::mem_pestat] mean and std.dev: (197.91, 42.33) [M::mem_pestat] low and high boundaries for proper pairs: (29, 367) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (279.67, 144.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 993) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 199, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (205.00, 73.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 861) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728150 reads in 80.522 CPU sec, 2.637 real sec sorting block 81, #reads = 1103864 mem = 536878041 peak = 910454784 [M::process] read 727390 sequences (100000153 bp) in 3.215 CPU sec, 3.603 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 306794, 6, 8) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 203, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (200.50, 66.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 817) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 794) [M::mem_pestat] mean and std.dev: (282.30, 145.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 727390 reads in 75.908 CPU sec, 2.466 real sec [M::process] read 726440 sequences (100000262 bp) in 2.320 CPU sec, 2.577 real sec... sorting block 82, #reads = 1104174 mem = 536878287 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306297, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 213, 308) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 616) [M::mem_pestat] mean and std.dev: (203.60, 67.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 770) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (283.61, 145.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 193, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (229.40, 129.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1210) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726440 reads in 80.384 CPU sec, 2.621 real sec [M::process] read 726392 sequences (100000075 bp) in 2.744 CPU sec, 2.963 real sec... sorting block 83, #reads = 1103613 mem = 536882869 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306238, 4, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 223, 672) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1742) [M::mem_pestat] mean and std.dev: (347.07, 376.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2277) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (284.29, 146.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 187, 224) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 404) [M::mem_pestat] mean and std.dev: (164.42, 44.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 494) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726200 sequences (100000057 bp) in 2.655 CPU sec, 2.858 real sec... [M::mem_process_seqs] Processed 726392 reads in 89.151 CPU sec, 2.895 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306163, 2, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 195, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 398) [M::mem_pestat] mean and std.dev: (174.53, 56.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 488) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (285.52, 147.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 180, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 672) [M::mem_pestat] mean and std.dev: (203.23, 66.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 845) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726200 reads in 86.543 CPU sec, 2.803 real sec [M::process] read 726006 sequences (100000179 bp) in 2.915 CPU sec, 3.136 real sec... sorting block 84, #reads = 1103472 mem = 536878855 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306133, 8, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 211, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (233.63, 122.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 811) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 261, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (284.84, 145.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (116, 201, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 686) [M::mem_pestat] mean and std.dev: (231.10, 160.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 876) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725962 sequences (100000219 bp) in 2.530 CPU sec, 2.678 real sec... [M::mem_process_seqs] Processed 726006 reads in 84.717 CPU sec, 2.748 real sec sorting block 85, #reads = 1102931 mem = 536877038 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305459, 3, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 214, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 683) [M::mem_pestat] mean and std.dev: (257.50, 131.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 852) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (284.00, 144.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 265, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (219.36, 96.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725962 reads in 86.525 CPU sec, 2.796 real sec [M::process] read 725656 sequences (100000287 bp) in 2.751 CPU sec, 2.906 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305196, 2, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 197, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 539) [M::mem_pestat] mean and std.dev: (178.84, 57.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 676) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 261, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 794) [M::mem_pestat] mean and std.dev: (284.98, 145.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1002) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (119, 216, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 464) [M::mem_pestat] mean and std.dev: (177.75, 74.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 579) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725666 sequences (100000117 bp) in 2.541 CPU sec, 2.745 real sec... [M::mem_process_seqs] Processed 725656 reads in 87.441 CPU sec, 2.838 real sec sorting block 86, #reads = 1102278 mem = 536879997 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 305534, 1, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 202, 286) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 564) [M::mem_pestat] mean and std.dev: (204.39, 101.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 703) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (286.84, 147.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 161, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1028) [M::mem_pestat] mean and std.dev: (261.00, 227.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1322) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725666 reads in 85.899 CPU sec, 2.785 real sec [M::process] read 725288 sequences (100000067 bp) in 2.865 CPU sec, 3.022 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305663, 4, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 218, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (208.14, 84.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 661) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (286.79, 145.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 181, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (209.30, 97.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 821) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 87, #reads = 1102535 mem = 536878753 peak = 910454784 [M::mem_process_seqs] Processed 725288 reads in 88.438 CPU sec, 2.872 real sec [M::process] read 725000 sequences (100000027 bp) in 2.978 CPU sec, 3.297 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 304615, 3, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 219, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 577) [M::mem_pestat] mean and std.dev: (217.40, 65.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 717) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (286.75, 145.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (122, 168, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 536) [M::mem_pestat] mean and std.dev: (189.83, 85.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 674) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725000 reads in 87.332 CPU sec, 2.824 real sec [M::process] read 724446 sequences (100000206 bp) in 2.665 CPU sec, 2.837 real sec... sorting block 88, #reads = 1102031 mem = 536878143 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305227, 5, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 166, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 479) [M::mem_pestat] mean and std.dev: (189.53, 76.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 592) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 266, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (288.73, 146.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 255, 1075) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2877) [M::mem_pestat] mean and std.dev: (511.91, 591.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3778) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724446 reads in 87.892 CPU sec, 2.852 real sec [M::process] read 724556 sequences (100000118 bp) in 3.179 CPU sec, 3.443 real sec... sorting block 89, #reads = 1101730 mem = 536877608 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 304697, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 218, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 678) [M::mem_pestat] mean and std.dev: (244.16, 93.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (290.24, 147.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 221, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (246.81, 127.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724388 sequences (100000050 bp) in 2.605 CPU sec, 2.752 real sec... [M::process] read 724414 sequences (100000070 bp) in 1.789 CPU sec, 1.796 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 305019, 5, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 194, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 554) [M::mem_pestat] mean and std.dev: (214.96, 95.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 691) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 818) [M::mem_pestat] mean and std.dev: (291.77, 148.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1033) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (122, 173, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 497) [M::mem_pestat] mean and std.dev: (181.81, 75.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 622) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724388 reads in 83.181 CPU sec, 2.704 real sec [M::process] read 724422 sequences (100000084 bp) in 2.467 CPU sec, 2.576 real sec... [M::mem_process_seqs] Processed 724556 reads in 228.777 CPU sec, 7.367 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305007, 6, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 199, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 421) [M::mem_pestat] mean and std.dev: (209.50, 71.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 505) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (293.28, 151.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1045) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 217, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (187.36, 79.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1006) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 229508 sequences (31691099 bp) in 0.967 CPU sec, 1.047 real sec... sorting block 90, #reads = 1101586 mem = 536878537 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304876, 7, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (117, 205, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (218.12, 106.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 969) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 270, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (294.80, 152.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1057) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 229, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 565) [M::mem_pestat] mean and std.dev: (208.41, 70.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 703) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724414 reads in 158.450 CPU sec, 5.065 real sec [M::mem_process_seqs] Processed 724422 reads in 86.040 CPU sec, 2.784 real sec sorting block 91, #reads = 1101699 mem = 536879159 peak = 910454784 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 96737, 1, 7) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 270, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (294.59, 152.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1057) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_process_seqs] Processed 229508 reads in 27.041 CPU sec, 0.925 real sec os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 101777656 overall: 69459136512 mem 15204.958 user 1037.257 sys 568.139 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:20260529_LH00995_0049_B23YT2HLT4.SH032_HG514.L008\tPU:L008\tSM:SH032_HG514\tLB:SH032_HG514\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 0002.SH032_HG514_R1.fastq.gz 0002.SH032_HG514_R2.fastq.gz [main] Real time: 568.168 sec; CPU: 16242.219 sec sorting block 92, #reads = 966485 mem = 471028799 peak = 910454784 uniq header count 1 merging 93 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 384 algo: util-sort license: sentieon:util=1 output file size: 4452996283 output reads: 102378615 bam_mem_sort: 93 calls 85.369 user 2.047 sys 87.983 real bam_write: 93 calls 53.122 user 4.889 sys 84.233 real execute: 1 calls 20.839 user 1.038 sys 591.572 real merge_files: 1 calls 20.823 user 1.003 sys 22.722 real parse_chunk: 1487 calls 69.299 user 20.060 sys 98.549 real read_chunk: 4025 calls 42.430 user 24.187 sys 448.334 real sort_block: 1 calls 35.804 user 23.691 sys 438.922 real write_chunk: 2536 calls 20.464 user 0.696 sys 21.804 real overall: 2323902464 mem 1018.958 user 72.987 sys 591.588 real ls: cannot access '*.cram': No such file or directory