File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/e2b788402a7cfebf3e5b3578ee947d/.command.err
Size
1.3 KB
Attempt
Detecting adapter sequence for read1...
No adapter detected for read1

Detecting adapter sequence for read2...
No adapter detected for read2

Read1 before filtering:
total reads: 0
total bases: 0
Q20 bases: 0(-nan%)
Q30 bases: 0(-nan%)
Q40 bases: 0(-nan%)

Read2 before filtering:
total reads: 0
total bases: 0
Q20 bases: 0(-nan%)
Q30 bases: 0(-nan%)
Q40 bases: 0(-nan%)

Read1 after filtering:
total reads: 0
total bases: 0
Q20 bases: 0(-nan%)
Q30 bases: 0(-nan%)
Q40 bases: 0(-nan%)

Read2 after filtering:
total reads: 0
total bases: 0
Q20 bases: 0(-nan%)
Q30 bases: 0(-nan%)
Q40 bases: 0(-nan%)

Filtering result:
reads passed filter: 0
reads failed due to low quality: 0
reads failed due to too many N: 0
reads failed due to too short: 0
reads with adapter trimmed: 0
bases trimmed due to adapters: 0

Duplication rate: 0%

Insert size peak (evaluated by paired-end reads): 0

JSON report: 13929215-cfDNA.fastp.json
HTML report: 13929215-cfDNA.fastp.html

fastp --in1 13929215-cfDNA_S24_L003_R1_001.fastq.gz --in2 13929215-cfDNA_S24_L003_R2_001.fastq.gz --out1 13929215-cfDNA/13929215-cfDNA_R1.fastq.gz --out2 13929215-cfDNA/13929215-cfDNA_R2.fastq.gz --detect_adapter_for_pe --length_required 15 --umi --umi_loc per_read --umi_len 6 --json 13929215-cfDNA.fastp.json --html 13929215-cfDNA.fastp.html --thread 4 
fastp v1.0.1, time used: 0 seconds