This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o SH032_HG514.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 2633.155 CPU sec, 96.287 real sec [M::process] read 728098 sequences (100000089 bp) in 1.243 CPU sec, 1.244 real sec... [M::process] read 727130 sequences (100000099 bp) in 1.761 CPU sec, 1.789 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 307324, 3, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 205, 242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (98, 338) [M::mem_pestat] mean and std.dev: (190.15, 37.99) [M::mem_pestat] low and high boundaries for proper pairs: (38, 386) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 253, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 774) [M::mem_pestat] mean and std.dev: (277.28, 142.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 977) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 217, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 632) [M::mem_pestat] mean and std.dev: (215.71, 88.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 792) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726802 sequences (100000012 bp) in 1.701 CPU sec, 1.720 real sec... [M::process] read 726852 sequences (100000247 bp) in 1.699 CPU sec, 1.721 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306492, 5, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 238, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 912) [M::mem_pestat] mean and std.dev: (297.71, 233.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1231) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (281.02, 143.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 190, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (224.10, 106.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728098 reads in 204.602 CPU sec, 6.568 real sec [M::mem_process_seqs] Processed 727130 reads in 106.741 CPU sec, 3.476 real sec sorting block 0, #reads = 1104475 mem = 536879881 peak = 581468160 [M::process] read 726528 sequences (100000096 bp) in 1.727 CPU sec, 1.813 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306476, 5, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 180, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (220.20, 130.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (281.96, 144.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 182, 228) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (15, 370) [M::mem_pestat] mean and std.dev: (179.32, 59.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727660 sequences (100000078 bp) in 1.430 CPU sec, 1.426 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 306557, 2, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 201, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (185.45, 58.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 616) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (281.79, 144.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 232, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1118) [M::mem_pestat] mean and std.dev: (281.87, 228.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1437) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 306498, 5, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 186, 223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (16, 361) [M::mem_pestat] mean and std.dev: (188.50, 58.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 430) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (282.74, 144.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (117, 146, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1110) [M::mem_pestat] mean and std.dev: (255.77, 158.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726802 reads in 268.873 CPU sec, 8.652 real sec [M::mem_process_seqs] Processed 726852 reads in 185.755 CPU sec, 6.029 real sec [M::mem_process_seqs] Processed 726528 reads in 193.526 CPU sec, 6.299 real sec sorting block 1, #reads = 1103653 mem = 536876848 peak = 738430976 sorting block 2, #reads = 1103637 mem = 536878371 peak = 884502528 [M::process] read 728064 sequences (100000030 bp) in 2.150 CPU sec, 2.273 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306969, 4, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 182, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (3, 333) [M::mem_pestat] mean and std.dev: (166.75, 44.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 399) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 254, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (279.31, 143.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 192, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (63, 383) [M::mem_pestat] mean and std.dev: (199.89, 53.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 447) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727906 sequences (100000019 bp) in 1.514 CPU sec, 1.550 real sec... [M::process] read 724856 sequences (100000090 bp) in 1.457 CPU sec, 1.471 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 306642, 6, 19) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 251, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 767) [M::mem_pestat] mean and std.dev: (276.00, 141.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 968) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 200, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (6, 386) [M::mem_pestat] mean and std.dev: (185.76, 58.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 462) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727660 reads in 187.768 CPU sec, 5.987 real sec [M::mem_process_seqs] Processed 728064 reads in 107.855 CPU sec, 3.427 real sec sorting block 3, #reads = 1104190 mem = 536880162 peak = 884502528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 307020, 2, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 213, 441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 981) [M::mem_pestat] mean and std.dev: (232.29, 107.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1251) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 252, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 774) [M::mem_pestat] mean and std.dev: (277.18, 142.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 977) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 207, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 489) [M::mem_pestat] mean and std.dev: (210.82, 73.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 602) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724340 sequences (100000124 bp) in 2.356 CPU sec, 2.535 real sec... [M::process] read 723986 sequences (100000054 bp) in 1.640 CPU sec, 1.645 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305797, 3, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (107, 155, 192) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 362) [M::mem_pestat] mean and std.dev: (145.79, 41.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 447) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 265, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (288.24, 146.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 186, 238) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (31, 376) [M::mem_pestat] mean and std.dev: (178.70, 42.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 445) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727906 reads in 187.397 CPU sec, 5.967 real sec sorting block 4, #reads = 1104448 mem = 536878480 peak = 884502528 [M::process] read 723596 sequences (100000018 bp) in 1.180 CPU sec, 1.187 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305146, 1, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 227, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 495) [M::mem_pestat] mean and std.dev: (203.15, 58.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 609) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 266, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (288.60, 145.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 195, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 584) [M::mem_pestat] mean and std.dev: (207.87, 101.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 734) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724340 reads in 96.909 CPU sec, 3.102 real sec [M::mem_process_seqs] Processed 724856 reads in 227.499 CPU sec, 7.282 real sec sorting block 5, #reads = 1102414 mem = 536878492 peak = 884502528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305280, 6, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 205, 226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (13, 368) [M::mem_pestat] mean and std.dev: (198.32, 59.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 439) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (292.37, 148.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1030) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 251, 290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 618) [M::mem_pestat] mean and std.dev: (206.40, 71.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 782) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723334 sequences (100000058 bp) in 2.020 CPU sec, 2.076 real sec... [M::process] read 723076 sequences (100000257 bp) in 1.669 CPU sec, 1.676 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304825, 1, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 222, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 932) [M::mem_pestat] mean and std.dev: (335.59, 231.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1260) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 271, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 817) [M::mem_pestat] mean and std.dev: (293.19, 148.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1031) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 203, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 540) [M::mem_pestat] mean and std.dev: (198.36, 70.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 672) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723986 reads in 189.567 CPU sec, 6.029 real sec [M::mem_process_seqs] Processed 723596 reads in 100.624 CPU sec, 3.206 real sec sorting block 6, #reads = 1101585 mem = 536878220 peak = 884502528 [M::process] read 723012 sequences (100000267 bp) in 2.167 CPU sec, 2.273 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304905, 6, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 198, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (208.38, 72.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 895) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 818) [M::mem_pestat] mean and std.dev: (293.99, 148.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1032) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 240, 278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 490) [M::mem_pestat] mean and std.dev: (231.12, 84.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 596) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722532 sequences (100000198 bp) in 1.656 CPU sec, 1.669 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304589, 6, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 201, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (187.38, 66.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 606) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (296.59, 149.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1045) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 249, 278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 512) [M::mem_pestat] mean and std.dev: (235.21, 90.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 304397, 2, 7) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 274, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 830) [M::mem_pestat] mean and std.dev: (296.11, 149.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_process_seqs] Processed 723334 reads in 267.099 CPU sec, 8.549 real sec sorting block 7, #reads = 1100742 mem = 536877683 peak = 892780544 [M::mem_process_seqs] Processed 723012 reads in 187.510 CPU sec, 6.031 real sec [M::mem_process_seqs] Processed 723076 reads in 196.047 CPU sec, 6.362 real sec sorting block 8, #reads = 1100773 mem = 536878053 peak = 892780544 [M::process] read 722468 sequences (100000127 bp) in 2.079 CPU sec, 2.283 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 304603, 3, 21) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 276, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (297.56, 149.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1046) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 238, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 453) [M::mem_pestat] mean and std.dev: (219.63, 52.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 544) [M::mem_pestat] skip orientation RR [M::process] read 725490 sequences (100000184 bp) in 1.394 CPU sec, 1.424 real sec... [M::process] read 726994 sequences (100000201 bp) in 1.180 CPU sec, 1.179 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 303807, 1, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 185, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (180.00, 66.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 913) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (179, 277, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (298.95, 150.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1051) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (124, 178, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 550) [M::mem_pestat] mean and std.dev: (182.90, 63.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 692) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722532 reads in 178.522 CPU sec, 5.714 real sec sorting block 9, #reads = 1100019 mem = 536879402 peak = 892780544 [M::mem_process_seqs] Processed 722468 reads in 99.132 CPU sec, 3.159 real sec sorting block 10, #reads = 1099816 mem = 536877722 peak = 910299136 [M::process] read 726872 sequences (100000048 bp) in 2.061 CPU sec, 2.182 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305809, 6, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 171, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 481) [M::mem_pestat] mean and std.dev: (202.92, 95.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 596) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (288.46, 147.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (128, 182, 226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 422) [M::mem_pestat] mean and std.dev: (173.21, 73.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 520) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726760 sequences (100000170 bp) in 1.170 CPU sec, 1.170 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 306770, 5, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 173, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (202.77, 77.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 649) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 256, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (280.51, 143.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (109, 177, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (189.54, 88.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 921) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306536, 2, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 255, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (197.77, 101.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1030) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 794) [M::mem_pestat] mean and std.dev: (282.77, 145.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 223, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 461) [M::mem_pestat] mean and std.dev: (203.50, 82.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 565) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725490 reads in 254.038 CPU sec, 8.151 real sec [M::mem_process_seqs] Processed 726994 reads in 175.020 CPU sec, 5.647 real sec [M::mem_process_seqs] Processed 726872 reads in 182.325 CPU sec, 5.913 real sec sorting block 11, #reads = 1101527 mem = 536878194 peak = 910299136 [M::process] read 725992 sequences (100000197 bp) in 1.905 CPU sec, 2.066 real sec... sorting block 12, #reads = 1103413 mem = 536879690 peak = 910299136 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306619, 6, 8) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (123, 139, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 555) [M::mem_pestat] mean and std.dev: (175.06, 84.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 699) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (282.25, 144.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 996) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 725922 sequences (100000231 bp) in 1.991 CPU sec, 2.096 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306261, 4, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 187, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (193.05, 70.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 649) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 262, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (285.29, 145.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 190, 213) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (42, 327) [M::mem_pestat] mean and std.dev: (176.12, 47.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 384) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726760 reads in 173.845 CPU sec, 5.518 real sec [M::process] read 726834 sequences (100000015 bp) in 1.370 CPU sec, 1.363 real sec... [M::mem_process_seqs] Processed 725992 reads in 96.564 CPU sec, 3.045 real sec sorting block 13, #reads = 1103109 mem = 536877597 peak = 910299136 [M::process] read 727298 sequences (100000264 bp) in 2.254 CPU sec, 2.357 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 305864, 8, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 202, 232) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (76, 336) [M::mem_pestat] mean and std.dev: (199.87, 56.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 425) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 262, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (285.65, 146.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 186, 238) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 446) [M::mem_pestat] mean and std.dev: (174.93, 55.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 550) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726094 sequences (100000147 bp) in 1.560 CPU sec, 1.559 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 306371, 5, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 195, 210) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 370) [M::mem_pestat] mean and std.dev: (185.00, 72.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 475) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (280.94, 143.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 298, 433) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 953) [M::mem_pestat] mean and std.dev: (305.21, 156.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1213) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725922 reads in 189.482 CPU sec, 6.042 real sec [M::mem_process_seqs] Processed 726834 reads in 107.776 CPU sec, 3.447 real sec sorting block 14, #reads = 1102649 mem = 536880800 peak = 910299136 [M::process] read 724426 sequences (100000138 bp) in 1.702 CPU sec, 1.789 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306966, 3, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 172, 231) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 441) [M::mem_pestat] mean and std.dev: (169.69, 50.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 546) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (279.29, 143.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (117, 186, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 540) [M::mem_pestat] mean and std.dev: (182.84, 69.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 681) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723978 sequences (100000215 bp) in 1.580 CPU sec, 1.584 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305700, 5, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 208, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (24, 434) [M::mem_pestat] mean and std.dev: (222.38, 75.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 524) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 268, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (290.58, 147.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 219, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (3, 443) [M::mem_pestat] mean and std.dev: (203.00, 62.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 531) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 306331, 2, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 173, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (34, 324) [M::mem_pestat] mean and std.dev: (183.72, 58.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 418) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (283.15, 144.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 237, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 498) [M::mem_pestat] mean and std.dev: (205.37, 74.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 614) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727298 reads in 277.993 CPU sec, 8.920 real sec sorting block 15, #reads = 1103598 mem = 536879593 peak = 910299136 [M::mem_process_seqs] Processed 724426 reads in 194.147 CPU sec, 6.236 real sec [M::mem_process_seqs] Processed 726094 reads in 201.878 CPU sec, 6.514 real sec sorting block 16, #reads = 1102878 mem = 536879964 peak = 910299136 [M::process] read 724148 sequences (100000126 bp) in 2.327 CPU sec, 2.527 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 305628, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 141, 181) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (37, 277) [M::mem_pestat] mean and std.dev: (147.44, 37.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 325) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (291.12, 146.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 187, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (231.43, 101.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1032) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723644 sequences (100000126 bp) in 1.403 CPU sec, 1.436 real sec... [M::process] read 723498 sequences (100000000 bp) in 1.680 CPU sec, 1.684 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304959, 2, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (113, 145, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 563) [M::mem_pestat] mean and std.dev: (153.45, 61.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 713) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (291.40, 147.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1026) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 220, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 688) [M::mem_pestat] mean and std.dev: (216.36, 81.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 867) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723978 reads in 194.904 CPU sec, 6.229 real sec sorting block 17, #reads = 1102653 mem = 536878463 peak = 910299136 [M::process] read 723506 sequences (100000005 bp) in 1.886 CPU sec, 1.896 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305199, 3, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (118, 124, 228) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 448) [M::mem_pestat] mean and std.dev: (162.17, 62.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 558) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 272, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (293.66, 148.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1035) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (127, 150, 226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 424) [M::mem_pestat] mean and std.dev: (154.67, 62.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 523) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723644 reads in 107.185 CPU sec, 3.522 real sec sorting block 18, #reads = 1100819 mem = 536879616 peak = 910299136 [M::mem_process_seqs] Processed 724148 reads in 242.216 CPU sec, 7.820 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304931, 4, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (127, 257, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (223.88, 92.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 911) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (295.12, 149.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 177, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (199.25, 75.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 610) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723198 sequences (100000188 bp) in 2.448 CPU sec, 2.587 real sec... [M::process] read 722860 sequences (100000005 bp) in 1.865 CPU sec, 1.867 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304955, 5, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 161, 242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 464) [M::mem_pestat] mean and std.dev: (173.55, 72.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 575) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (294.99, 148.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 167, 185) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (65, 265) [M::mem_pestat] mean and std.dev: (167.88, 35.95) [M::mem_pestat] low and high boundaries for proper pairs: (24, 312) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723498 reads in 204.552 CPU sec, 6.511 real sec sorting block 19, #reads = 1101022 mem = 536879981 peak = 910299136 [M::mem_process_seqs] Processed 723506 reads in 110.227 CPU sec, 3.498 real sec sorting block 20, #reads = 1100885 mem = 536881310 peak = 910299136 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304682, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 181, 291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 587) [M::mem_pestat] mean and std.dev: (193.42, 66.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 735) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (296.61, 149.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 256, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 637) [M::mem_pestat] mean and std.dev: (271.22, 96.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 785) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722732 sequences (100000154 bp) in 2.456 CPU sec, 2.573 real sec... [M::process] read 728082 sequences (100000155 bp) in 1.789 CPU sec, 1.788 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304526, 10, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 235, 2837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8143) [M::mem_pestat] mean and std.dev: (860.08, 1191.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10796) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (298.89, 151.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1058) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (18, 357, 1212) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3600) [M::mem_pestat] mean and std.dev: (491.33, 526.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4794) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 252, 290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 586) [M::mem_pestat] mean and std.dev: (208.84, 63.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 734) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723198 reads in 195.844 CPU sec, 6.242 real sec [M::mem_process_seqs] Processed 722860 reads in 110.216 CPU sec, 3.509 real sec sorting block 21, #reads = 1100448 mem = 536879351 peak = 910299136 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304204, 1, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 159, 219) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 405) [M::mem_pestat] mean and std.dev: (172.47, 60.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 498) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 278, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 841) [M::mem_pestat] mean and std.dev: (299.42, 151.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1062) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 249, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1030) [M::mem_pestat] mean and std.dev: (312.40, 221.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1314) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727150 sequences (100000029 bp) in 1.937 CPU sec, 2.015 real sec... [M::process] read 726610 sequences (100000033 bp) in 1.739 CPU sec, 1.742 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 306873, 4, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 162, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 477) [M::mem_pestat] mean and std.dev: (186.53, 78.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 594) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (279.00, 144.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 989) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (111, 151, 203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (161.69, 72.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722732 reads in 193.868 CPU sec, 6.211 real sec [M::mem_process_seqs] Processed 728082 reads in 107.829 CPU sec, 3.439 real sec sorting block 22, #reads = 1099625 mem = 536878198 peak = 910299136 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 307013, 8, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 171, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (177.93, 78.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 870) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 726428 sequences (100000088 bp) in 2.043 CPU sec, 2.137 real sec... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (280.83, 144.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 176, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 483) [M::mem_pestat] mean and std.dev: (179.86, 69.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 602) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725860 sequences (100000149 bp) in 1.680 CPU sec, 1.677 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306562, 7, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 209, 290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 550) [M::mem_pestat] mean and std.dev: (221.90, 82.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 680) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (282.82, 145.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (140, 166, 222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 386) [M::mem_pestat] mean and std.dev: (175.94, 46.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 468) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727150 reads in 193.540 CPU sec, 6.190 real sec [M::mem_process_seqs] Processed 726610 reads in 108.934 CPU sec, 3.484 real sec sorting block 23, #reads = 1103441 mem = 536877796 peak = 910299136 sorting block 24, #reads = 1103908 mem = 536877646 peak = 910299136 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306499, 6, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 187, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 419) [M::mem_pestat] mean and std.dev: (186.82, 55.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 507) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (284.12, 146.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 149, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 580) [M::mem_pestat] mean and std.dev: (155.00, 39.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 728) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725820 sequences (100000134 bp) in 2.105 CPU sec, 2.231 real sec... [M::process] read 726060 sequences (100000044 bp) in 1.620 CPU sec, 1.617 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305922, 4, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (114, 149, 215) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 417) [M::mem_pestat] mean and std.dev: (159.62, 61.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 518) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (286.45, 147.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 174, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 432) [M::mem_pestat] mean and std.dev: (189.53, 55.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 525) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726428 reads in 193.683 CPU sec, 6.186 real sec [M::mem_process_seqs] Processed 725860 reads in 109.433 CPU sec, 3.501 real sec sorting block 25, #reads = 1103592 mem = 536877656 peak = 910299136 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305974, 5, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 172, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 540) [M::mem_pestat] mean and std.dev: (165.93, 52.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 672) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (286.27, 146.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 239, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 485) [M::mem_pestat] mean and std.dev: (212.36, 82.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 595) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725952 sequences (100000257 bp) in 2.922 CPU sec, 3.159 real sec... [M::process] read 724404 sequences (100000032 bp) in 1.720 CPU sec, 1.714 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 307014, 3, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 176, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 458) [M::mem_pestat] mean and std.dev: (184.85, 69.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (284.07, 145.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (114, 179, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (177.95, 65.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725820 reads in 195.082 CPU sec, 6.214 real sec [M::mem_process_seqs] Processed 726060 reads in 107.454 CPU sec, 3.416 real sec sorting block 26, #reads = 1102594 mem = 536879367 peak = 910299136 [M::process] read 724360 sequences (100000049 bp) in 2.039 CPU sec, 2.190 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 306205, 7, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 206, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 629) [M::mem_pestat] mean and std.dev: (216.59, 95.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 787) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (283.28, 144.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (128, 205, 295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 629) [M::mem_pestat] mean and std.dev: (195.37, 75.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 796) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723786 sequences (100000213 bp) in 1.800 CPU sec, 1.791 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305163, 5, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 257, 295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (247.65, 83.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 604) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (290.16, 147.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 199, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 454) [M::mem_pestat] mean and std.dev: (209.12, 66.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 552) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305478, 5, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 223, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 443) [M::mem_pestat] mean and std.dev: (197.00, 52.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 538) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (289.84, 146.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 227, 865) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2271) [M::mem_pestat] mean and std.dev: (547.41, 673.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3240) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725952 reads in 285.471 CPU sec, 9.159 real sec [M::mem_process_seqs] Processed 724404 reads in 200.043 CPU sec, 6.433 real sec sorting block 27, #reads = 1103160 mem = 536879375 peak = 910299136 [M::mem_process_seqs] Processed 724360 reads in 208.984 CPU sec, 6.749 real sec sorting block 28, #reads = 1101896 mem = 536880203 peak = 915722240 [M::process] read 724028 sequences (100000235 bp) in 2.526 CPU sec, 2.732 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305488, 3, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 173, 219) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (174.74, 50.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 471) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 270, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 817) [M::mem_pestat] mean and std.dev: (292.64, 148.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1031) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 202, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 449) [M::mem_pestat] mean and std.dev: (194.83, 41.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 543) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723390 sequences (100000064 bp) in 2.240 CPU sec, 2.311 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305090, 6, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 174, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 609) [M::mem_pestat] mean and std.dev: (202.20, 81.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 760) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 270, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (292.24, 147.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 220, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 623) [M::mem_pestat] mean and std.dev: (238.33, 94.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 775) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723786 reads in 198.327 CPU sec, 6.327 real sec [M::mem_process_seqs] Processed 724028 reads in 112.636 CPU sec, 3.558 real sec sorting block 29, #reads = 1101077 mem = 536879131 peak = 915722240 [M::process] read 723624 sequences (100000128 bp) in 1.931 CPU sec, 1.988 real sec... sorting block 30, #reads = 1101301 mem = 536879046 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305030, 4, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 177, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 463) [M::mem_pestat] mean and std.dev: (179.06, 65.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 572) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (295.24, 149.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 210, 229) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (76, 331) [M::mem_pestat] mean and std.dev: (200.47, 50.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 403) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722874 sequences (100000088 bp) in 2.531 CPU sec, 2.719 real sec... [M::process] read 723170 sequences (100000165 bp) in 1.789 CPU sec, 1.789 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305251, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 207, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (220.00, 97.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 274, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (295.11, 149.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 185, 219) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (27, 347) [M::mem_pestat] mean and std.dev: (179.88, 42.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 411) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723390 reads in 194.255 CPU sec, 6.189 real sec [M::mem_process_seqs] Processed 723624 reads in 108.870 CPU sec, 3.460 real sec sorting block 31, #reads = 1101341 mem = 536880277 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 304999, 5, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 183, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 648) [M::mem_pestat] mean and std.dev: (245.35, 155.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 869) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (296.95, 150.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 207, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 469) [M::mem_pestat] mean and std.dev: (189.43, 51.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 570) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722842 sequences (100000083 bp) in 2.638 CPU sec, 2.780 real sec... [M::process] read 724706 sequences (100000076 bp) in 1.840 CPU sec, 1.837 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304833, 5, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 139, 642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1664) [M::mem_pestat] mean and std.dev: (215.53, 173.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2175) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 276, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 834) [M::mem_pestat] mean and std.dev: (297.66, 151.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1053) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 233, 721) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1697) [M::mem_pestat] mean and std.dev: (403.55, 259.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2185) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722874 reads in 196.308 CPU sec, 6.257 real sec [M::mem_process_seqs] Processed 723170 reads in 111.110 CPU sec, 3.556 real sec sorting block 32, #reads = 1101147 mem = 536879896 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 304634, 2, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 213, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 459) [M::mem_pestat] mean and std.dev: (210.61, 72.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 555) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 835) [M::mem_pestat] mean and std.dev: (298.51, 150.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1054) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (116, 179, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 617) [M::mem_pestat] mean and std.dev: (200.82, 106.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 784) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728184 sequences (100000079 bp) in 2.571 CPU sec, 2.697 real sec... [M::process] read 727322 sequences (100000203 bp) in 1.547 CPU sec, 1.551 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305552, 3, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 197, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (209.16, 61.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 598) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 815) [M::mem_pestat] mean and std.dev: (291.07, 148.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1029) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 244, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 621) [M::mem_pestat] mean and std.dev: (235.44, 90.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 779) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722842 reads in 196.435 CPU sec, 6.283 real sec [M::mem_process_seqs] Processed 724706 reads in 109.741 CPU sec, 3.496 real sec sorting block 33, #reads = 1100778 mem = 536877108 peak = 915722240 sorting block 34, #reads = 1100775 mem = 536876349 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 307040, 7, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (120, 202, 231) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 453) [M::mem_pestat] mean and std.dev: (189.48, 71.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 564) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 782) [M::mem_pestat] mean and std.dev: (278.26, 144.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 162, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 466) [M::mem_pestat] mean and std.dev: (188.91, 66.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 573) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726534 sequences (100000193 bp) in 2.424 CPU sec, 2.604 real sec... [M::process] read 726616 sequences (100000197 bp) in 1.489 CPU sec, 1.491 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306877, 0, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 298, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (325.84, 186.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1070) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (279.99, 144.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 192, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 951) [M::mem_pestat] mean and std.dev: (289.00, 151.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728184 reads in 193.750 CPU sec, 6.211 real sec [M::mem_process_seqs] Processed 727322 reads in 105.933 CPU sec, 3.402 real sec sorting block 35, #reads = 1104666 mem = 536877791 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306371, 3, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 209, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 780) [M::mem_pestat] mean and std.dev: (216.06, 93.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 994) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 798) [M::mem_pestat] mean and std.dev: (284.17, 146.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1008) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 214, 239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 449) [M::mem_pestat] mean and std.dev: (182.58, 54.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 554) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725800 sequences (100000225 bp) in 2.717 CPU sec, 2.882 real sec... [M::process] read 725314 sequences (100000156 bp) in 1.790 CPU sec, 1.784 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 306836, 3, 10) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (283.68, 146.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (298, 371, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 844) [M::mem_pestat] mean and std.dev: (374.20, 144.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1026) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726534 reads in 199.733 CPU sec, 6.401 real sec [M::mem_process_seqs] Processed 726616 reads in 112.455 CPU sec, 3.600 real sec sorting block 36, #reads = 1103462 mem = 536879886 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306109, 6, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 195, 240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 442) [M::mem_pestat] mean and std.dev: (182.00, 54.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 543) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (285.59, 147.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 206, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 710) [M::mem_pestat] mean and std.dev: (258.59, 124.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 890) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725566 sequences (100000224 bp) in 2.606 CPU sec, 2.757 real sec... [M::process] read 725458 sequences (100000088 bp) in 1.794 CPU sec, 1.797 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 305784, 7, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 233, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 691) [M::mem_pestat] mean and std.dev: (217.00, 88.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 866) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (287.34, 146.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (125, 162, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 587) [M::mem_pestat] mean and std.dev: (170.07, 64.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 741) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725800 reads in 184.655 CPU sec, 5.898 real sec [M::mem_process_seqs] Processed 725314 reads in 102.692 CPU sec, 3.263 real sec sorting block 37, #reads = 1103473 mem = 536878133 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306314, 5, 6) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 203, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 488) [M::mem_pestat] mean and std.dev: (213.84, 64.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 590) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (285.89, 146.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1010) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF sorting block 38, #reads = 1102499 mem = 536881014 peak = 915722240 [M::process] read 724758 sequences (100000158 bp) in 2.546 CPU sec, 2.747 real sec... [M::process] read 724414 sequences (100000070 bp) in 1.841 CPU sec, 1.842 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305198, 4, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 201, 227) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (8, 373) [M::mem_pestat] mean and std.dev: (183.00, 53.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 446) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (286.64, 146.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (129, 155, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 402) [M::mem_pestat] mean and std.dev: (177.56, 67.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 493) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725566 reads in 180.220 CPU sec, 5.749 real sec [M::mem_process_seqs] Processed 725458 reads in 101.337 CPU sec, 3.216 real sec sorting block 39, #reads = 1103188 mem = 536879217 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305741, 5, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 183, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 558) [M::mem_pestat] mean and std.dev: (216.06, 86.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 697) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (289.75, 148.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 195, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (184.35, 71.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 650) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725168 sequences (100000221 bp) in 3.173 CPU sec, 3.393 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 305535, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 208, 298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 650) [M::mem_pestat] mean and std.dev: (188.43, 74.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (289.58, 146.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 163, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 705) [M::mem_pestat] mean and std.dev: (194.55, 77.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 889) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724758 reads in 176.295 CPU sec, 5.640 real sec [M::mem_process_seqs] Processed 724414 reads in 101.350 CPU sec, 3.208 real sec [M::process] read 723868 sequences (100000212 bp) in 2.210 CPU sec, 2.289 real sec... sorting block 40, #reads = 1101887 mem = 536879284 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305629, 3, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 180, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 360) [M::mem_pestat] mean and std.dev: (159.17, 47.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 436) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (289.33, 149.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 238, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1037) [M::mem_pestat] mean and std.dev: (327.94, 253.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1341) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723644 sequences (100000174 bp) in 2.264 CPU sec, 2.429 real sec... [M::process] read 723372 sequences (100000222 bp) in 1.240 CPU sec, 1.243 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 305644, 1, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 218, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (14, 434) [M::mem_pestat] mean and std.dev: (225.00, 82.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 555) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (292.61, 149.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1034) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 165, 487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1175) [M::mem_pestat] mean and std.dev: (188.29, 98.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1519) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725168 reads in 172.687 CPU sec, 5.527 real sec [M::mem_process_seqs] Processed 723868 reads in 98.121 CPU sec, 3.115 real sec sorting block 41, #reads = 1102130 mem = 536880036 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305267, 2, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (129, 168, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 555) [M::mem_pestat] mean and std.dev: (186.00, 88.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 697) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 271, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (294.24, 149.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1039) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 220, 1595) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4473) [M::mem_pestat] mean and std.dev: (510.54, 595.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5912) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 42, #reads = 1101158 mem = 536877663 peak = 915722240 [M::process] read 723170 sequences (100000046 bp) in 2.726 CPU sec, 2.882 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305298, 11, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 179, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 472) [M::mem_pestat] mean and std.dev: (191.33, 84.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 584) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (296.03, 150.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (20, 75, 75) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 185) [M::mem_pestat] mean and std.dev: (53.55, 31.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 240) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (102, 174, 782) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2142) [M::mem_pestat] mean and std.dev: (358.79, 431.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2822) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722946 sequences (100000082 bp) in 1.840 CPU sec, 1.834 real sec... [M::mem_process_seqs] Processed 723644 reads in 175.125 CPU sec, 5.572 real sec [M::mem_process_seqs] Processed 723372 reads in 99.301 CPU sec, 3.139 real sec sorting block 43, #reads = 1101450 mem = 536880407 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304737, 5, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 167, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (47, 302) [M::mem_pestat] mean and std.dev: (169.83, 35.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 353) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (296.13, 150.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 191, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 466) [M::mem_pestat] mean and std.dev: (186.90, 54.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 573) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722786 sequences (100000161 bp) in 2.545 CPU sec, 2.726 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 304414, 8, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 194, 269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 509) [M::mem_pestat] mean and std.dev: (196.90, 60.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 728042 sequences (100000205 bp) in 1.900 CPU sec, 1.900 real sec... [M::mem_pestat] (25, 50, 75) percentile: (177, 274, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (295.74, 149.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 260, 290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 512) [M::mem_pestat] mean and std.dev: (236.00, 105.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723170 reads in 176.629 CPU sec, 5.615 real sec [M::mem_process_seqs] Processed 722946 reads in 100.699 CPU sec, 3.185 real sec sorting block 44, #reads = 1100145 mem = 536877408 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304777, 3, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 183, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 480) [M::mem_pestat] mean and std.dev: (177.41, 70.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 591) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (297.58, 150.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 244, 511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1243) [M::mem_pestat] mean and std.dev: (235.21, 122.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1609) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728276 sequences (100000112 bp) in 2.827 CPU sec, 2.990 real sec... [M::process] read 727418 sequences (100000191 bp) in 1.883 CPU sec, 1.892 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 307611, 3, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 198, 298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 624) [M::mem_pestat] mean and std.dev: (203.15, 86.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 787) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (280.77, 146.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 182, 213) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (18, 343) [M::mem_pestat] mean and std.dev: (176.25, 39.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 408) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722786 reads in 181.784 CPU sec, 5.779 real sec [M::mem_process_seqs] Processed 728042 reads in 104.256 CPU sec, 3.305 real sec sorting block 45, #reads = 1100435 mem = 536879046 peak = 915722240 [M::process] read 727208 sequences (100000169 bp) in 2.521 CPU sec, 2.719 real sec... [M::process] read 727424 sequences (100000003 bp) in 1.830 CPU sec, 1.825 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305930, 4, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 204, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 443) [M::mem_pestat] mean and std.dev: (208.89, 74.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 532) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 256, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (280.88, 144.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 179, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (3, 428) [M::mem_pestat] mean and std.dev: (210.27, 100.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727418 reads in 98.353 CPU sec, 3.123 real sec sorting block 46, #reads = 1103240 mem = 536878304 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305985, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 185, 242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 406) [M::mem_pestat] mean and std.dev: (186.00, 51.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 488) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (279.01, 144.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 993) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (135, 155, 233) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 429) [M::mem_pestat] mean and std.dev: (183.14, 72.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 527) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728052 sequences (100000000 bp) in 1.829 CPU sec, 1.836 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305798, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 160, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 416) [M::mem_pestat] mean and std.dev: (185.43, 85.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 526) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (281.35, 144.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 220, 292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 554) [M::mem_pestat] mean and std.dev: (223.50, 74.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 685) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728276 reads in 281.383 CPU sec, 8.967 real sec sorting block 47, #reads = 1103678 mem = 536879326 peak = 915722240 [M::process] read 728994 sequences (100000133 bp) in 1.917 CPU sec, 1.923 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306286, 3, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 247, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (207.30, 64.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 643) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (280.71, 144.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 994) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 261, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (268.47, 145.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1032) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727424 reads in 94.942 CPU sec, 3.132 real sec [M::mem_process_seqs] Processed 727208 reads in 233.123 CPU sec, 7.566 real sec sorting block 48, #reads = 1103942 mem = 536880135 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 307023, 3, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 152, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (17, 332) [M::mem_pestat] mean and std.dev: (160.70, 32.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 395) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 253, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 780) [M::mem_pestat] mean and std.dev: (278.00, 142.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 985) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (141, 249, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 891) [M::mem_pestat] mean and std.dev: (248.71, 166.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1141) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728796 sequences (100000266 bp) in 2.438 CPU sec, 2.587 real sec... [M::process] read 726260 sequences (100000193 bp) in 1.809 CPU sec, 1.806 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 307320, 5, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 187, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 615) [M::mem_pestat] mean and std.dev: (172.58, 53.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 769) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 249, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 763) [M::mem_pestat] mean and std.dev: (273.84, 140.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 963) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 182, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (25, 350) [M::mem_pestat] mean and std.dev: (177.83, 35.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 415) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728052 reads in 186.635 CPU sec, 5.921 real sec [M::mem_process_seqs] Processed 728994 reads in 102.179 CPU sec, 3.232 real sec sorting block 49, #reads = 1104156 mem = 536879361 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 307163, 10, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 163, 222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 400) [M::mem_pestat] mean and std.dev: (174.78, 59.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 489) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 249, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (273.20, 140.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (33, 49, 56) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 102) [M::mem_pestat] mean and std.dev: (40.00, 16.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 125) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 173, 282) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 572) [M::mem_pestat] mean and std.dev: (189.89, 83.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 717) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 725060 sequences (100000218 bp) in 2.449 CPU sec, 2.581 real sec... [M::process] read 725056 sequences (100000185 bp) in 1.890 CPU sec, 1.886 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305996, 4, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 224, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 426) [M::mem_pestat] mean and std.dev: (197.68, 50.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 516) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (283.24, 144.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 193, 238) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (7, 392) [M::mem_pestat] mean and std.dev: (185.56, 50.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 469) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728796 reads in 178.326 CPU sec, 5.673 real sec sorting block 50, #reads = 1103575 mem = 536877434 peak = 915722240 [M::mem_process_seqs] Processed 726260 reads in 98.338 CPU sec, 3.111 real sec sorting block 51, #reads = 1103797 mem = 536878297 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305314, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 169, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 483) [M::mem_pestat] mean and std.dev: (199.68, 81.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 597) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (288.62, 147.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1023) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 191, 282) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 554) [M::mem_pestat] mean and std.dev: (202.93, 85.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 690) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724616 sequences (100000199 bp) in 2.547 CPU sec, 2.722 real sec... [M::process] read 724810 sequences (100000191 bp) in 1.890 CPU sec, 1.896 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305004, 4, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 225, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (282.62, 163.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (287.92, 147.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 295, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (255.35, 99.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725060 reads in 181.205 CPU sec, 5.762 real sec [M::mem_process_seqs] Processed 725056 reads in 99.523 CPU sec, 3.137 real sec sorting block 52, #reads = 1102225 mem = 536877478 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 304988, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 208, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 466) [M::mem_pestat] mean and std.dev: (204.55, 55.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 564) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (290.18, 147.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1028) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 208, 278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 476) [M::mem_pestat] mean and std.dev: (211.17, 56.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 575) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724546 sequences (100000101 bp) in 2.369 CPU sec, 2.499 real sec... [M::process] read 723884 sequences (100000136 bp) in 1.844 CPU sec, 1.850 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305112, 3, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1364) [M::mem_pestat] mean and std.dev: (281.14, 160.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1768) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (291.21, 149.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (141, 209, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 462) [M::mem_pestat] mean and std.dev: (209.27, 90.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 570) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724616 reads in 170.651 CPU sec, 5.425 real sec [M::mem_process_seqs] Processed 724810 reads in 95.025 CPU sec, 3.002 real sec sorting block 53, #reads = 1101829 mem = 536881605 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 304930, 6, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 216, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 561) [M::mem_pestat] mean and std.dev: (226.53, 85.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 693) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (292.22, 149.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 249, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (71, 426) [M::mem_pestat] mean and std.dev: (227.33, 44.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 497) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723860 sequences (100000243 bp) in 2.328 CPU sec, 2.433 real sec... [M::process] read 724154 sequences (100000156 bp) in 1.810 CPU sec, 1.810 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 304473, 6, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 209, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 453) [M::mem_pestat] mean and std.dev: (199.19, 62.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 554) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (293.99, 150.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1046) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 237, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 458) [M::mem_pestat] mean and std.dev: (212.06, 49.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 557) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724546 reads in 179.284 CPU sec, 5.713 real sec sorting block 54, #reads = 1101838 mem = 536880840 peak = 915722240 [M::mem_process_seqs] Processed 723884 reads in 101.629 CPU sec, 3.230 real sec sorting block 55, #reads = 1101242 mem = 536879339 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304627, 3, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 169, 225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 387) [M::mem_pestat] mean and std.dev: (182.31, 60.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 468) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 270, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (295.02, 152.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1057) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (141, 194, 293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 597) [M::mem_pestat] mean and std.dev: (215.29, 118.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 749) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728766 sequences (100000115 bp) in 2.306 CPU sec, 2.422 real sec... [M::process] read 728688 sequences (100000042 bp) in 1.890 CPU sec, 1.890 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304967, 6, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 175, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 390) [M::mem_pestat] mean and std.dev: (160.50, 44.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 476) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 843) [M::mem_pestat] mean and std.dev: (295.89, 153.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1066) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 199, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 408) [M::mem_pestat] mean and std.dev: (175.76, 58.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 502) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723860 reads in 182.342 CPU sec, 5.802 real sec [M::mem_process_seqs] Processed 724154 reads in 103.941 CPU sec, 3.296 real sec sorting block 56, #reads = 1101003 mem = 536876976 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 307234, 7, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 147, 298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 606) [M::mem_pestat] mean and std.dev: (184.58, 71.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 760) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 251, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (279.27, 147.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 202, 241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 401) [M::mem_pestat] mean and std.dev: (199.65, 53.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 481) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727740 sequences (100000145 bp) in 2.487 CPU sec, 2.651 real sec... [M::process] read 727568 sequences (100000245 bp) in 1.999 CPU sec, 1.999 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 307498, 4, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 203, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 554) [M::mem_pestat] mean and std.dev: (207.43, 92.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 696) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 252, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (278.78, 145.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 996) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 186, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 503) [M::mem_pestat] mean and std.dev: (199.71, 55.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 615) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728766 reads in 189.512 CPU sec, 6.049 real sec [M::mem_process_seqs] Processed 728688 reads in 107.562 CPU sec, 3.416 real sec sorting block 57, #reads = 1102549 mem = 536879127 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306767, 1, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 210, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (193.76, 76.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 660) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (279.21, 144.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 989) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 235, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 548) [M::mem_pestat] mean and std.dev: (219.56, 83.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 680) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727268 sequences (100000203 bp) in 2.595 CPU sec, 2.812 real sec... [M::process] read 727782 sequences (100000155 bp) in 1.877 CPU sec, 1.876 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306094, 6, 7) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 236, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1158) [M::mem_pestat] mean and std.dev: (221.77, 90.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1489) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (281.19, 145.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 998) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_process_seqs] Processed 727740 reads in 194.707 CPU sec, 6.209 real sec [M::mem_process_seqs] Processed 727568 reads in 109.382 CPU sec, 3.469 real sec sorting block 58, #reads = 1105337 mem = 536879749 peak = 915722240 sorting block 59, #reads = 1103969 mem = 536877677 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306677, 2, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 162, 235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 403) [M::mem_pestat] mean and std.dev: (174.24, 43.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 487) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (281.67, 145.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1002) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (128, 201, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1340) [M::mem_pestat] mean and std.dev: (273.75, 243.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1744) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728842 sequences (100000049 bp) in 2.578 CPU sec, 2.776 real sec... [M::process] read 728726 sequences (100000026 bp) in 1.930 CPU sec, 1.926 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 306289, 6, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 269, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 594) [M::mem_pestat] mean and std.dev: (249.14, 70.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 725) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 255, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (280.47, 145.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 204, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 583) [M::mem_pestat] mean and std.dev: (214.46, 69.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 721) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727268 reads in 190.933 CPU sec, 6.092 real sec [M::mem_process_seqs] Processed 727782 reads in 107.389 CPU sec, 3.397 real sec sorting block 60, #reads = 1104105 mem = 536878032 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 307309, 6, 32) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 181, 216) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (24, 344) [M::mem_pestat] mean and std.dev: (181.20, 35.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 408) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 250, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (275.68, 142.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 975) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 179, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 445) [M::mem_pestat] mean and std.dev: (194.03, 70.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 539) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726230 sequences (100000022 bp) in 2.446 CPU sec, 2.611 real sec... [M::process] read 725254 sequences (100000074 bp) in 1.870 CPU sec, 1.872 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 307371, 9, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (124, 164, 241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 475) [M::mem_pestat] mean and std.dev: (181.88, 73.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 592) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 250, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 769) [M::mem_pestat] mean and std.dev: (275.18, 141.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 971) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (125, 154, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (207.21, 127.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1393) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728842 reads in 186.244 CPU sec, 5.937 real sec [M::mem_process_seqs] Processed 728726 reads in 105.257 CPU sec, 3.334 real sec sorting block 61, #reads = 1104989 mem = 536877951 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305770, 1, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 313, 491) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1159) [M::mem_pestat] mean and std.dev: (263.53, 132.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1493) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (284.48, 146.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 499) [M::mem_pestat] mean and std.dev: (191.67, 72.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 622) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725208 sequences (100000055 bp) in 2.352 CPU sec, 2.470 real sec... [M::process] read 724790 sequences (100000092 bp) in 1.850 CPU sec, 1.850 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305680, 2, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 172, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 509) [M::mem_pestat] mean and std.dev: (183.24, 71.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 638) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 265, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (288.92, 147.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 234, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 551) [M::mem_pestat] mean and std.dev: (233.85, 86.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 675) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726230 reads in 183.618 CPU sec, 5.849 real sec sorting block 62, #reads = 1105099 mem = 536879036 peak = 915722240 [M::mem_process_seqs] Processed 725254 reads in 103.377 CPU sec, 3.278 real sec sorting block 63, #reads = 1102474 mem = 536877755 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305588, 4, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 237, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 835) [M::mem_pestat] mean and std.dev: (246.00, 89.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1055) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 265, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (288.23, 147.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 271, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 992) [M::mem_pestat] mean and std.dev: (296.91, 202.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1253) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724782 sequences (100000039 bp) in 2.722 CPU sec, 2.890 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 304549, 4, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 176, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 596) [M::mem_pestat] mean and std.dev: (197.00, 78.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 747) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (289.67, 147.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 310, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (266.94, 118.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724790 sequences (100000091 bp) in 1.939 CPU sec, 1.940 real sec... [M::mem_process_seqs] Processed 725208 reads in 180.961 CPU sec, 5.770 real sec [M::mem_process_seqs] Processed 724790 reads in 102.660 CPU sec, 3.249 real sec sorting block 64, #reads = 1102219 mem = 536878806 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 305567, 7, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 171, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 416) [M::mem_pestat] mean and std.dev: (185.50, 60.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 507) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 817) [M::mem_pestat] mean and std.dev: (290.39, 148.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1032) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 187, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 579) [M::mem_pestat] mean and std.dev: (206.36, 96.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 717) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724518 sequences (100000104 bp) in 2.390 CPU sec, 2.497 real sec... [M::process] read 724524 sequences (100000126 bp) in 1.870 CPU sec, 1.868 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304741, 3, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 169, 180) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (93, 238) [M::mem_pestat] mean and std.dev: (165.07, 24.31) [M::mem_pestat] low and high boundaries for proper pairs: (64, 267) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 826) [M::mem_pestat] mean and std.dev: (292.37, 150.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 243, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (259.58, 95.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724782 reads in 176.224 CPU sec, 5.608 real sec [M::mem_process_seqs] Processed 724790 reads in 101.297 CPU sec, 3.211 real sec sorting block 65, #reads = 1101518 mem = 536880538 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 304786, 3, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (127, 210, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 475) [M::mem_pestat] mean and std.dev: (185.26, 69.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 591) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 835) [M::mem_pestat] mean and std.dev: (293.49, 151.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1056) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 195, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1319) [M::mem_pestat] mean and std.dev: (314.14, 241.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1710) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725194 sequences (100000074 bp) in 2.566 CPU sec, 2.721 real sec... [M::process] read 729742 sequences (100000187 bp) in 1.350 CPU sec, 1.351 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305279, 7, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 193, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 642) [M::mem_pestat] mean and std.dev: (191.89, 78.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 810) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (294.76, 152.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1057) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 183, 282) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 556) [M::mem_pestat] mean and std.dev: (191.71, 72.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 693) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724518 reads in 174.016 CPU sec, 5.545 real sec [M::mem_process_seqs] Processed 724524 reads in 96.606 CPU sec, 3.074 real sec sorting block 66, #reads = 1101357 mem = 536879031 peak = 915722240 sorting block 67, #reads = 1101518 mem = 536879162 peak = 915722240 [M::process] read 728194 sequences (100000165 bp) in 2.560 CPU sec, 2.692 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 307376, 4, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (109, 188, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 520) [M::mem_pestat] mean and std.dev: (163.27, 65.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 249, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (277.17, 146.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 173, 236) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 406) [M::mem_pestat] mean and std.dev: (195.00, 79.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 513) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727662 sequences (100000154 bp) in 1.810 CPU sec, 1.810 real sec... [M::mem_process_seqs] Processed 729742 reads in 94.338 CPU sec, 2.966 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (30, 305326, 8, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 191, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (209.17, 78.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 643) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 266, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 846) [M::mem_pestat] mean and std.dev: (294.22, 154.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1071) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 183, 201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (90, 275) [M::mem_pestat] mean and std.dev: (186.08, 33.05) [M::mem_pestat] low and high boundaries for proper pairs: (53, 318) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726892 sequences (100000161 bp) in 1.905 CPU sec, 1.907 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 306946, 6, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 222, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 492) [M::mem_pestat] mean and std.dev: (198.46, 81.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 608) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (279.51, 145.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (149, 237, 291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 575) [M::mem_pestat] mean and std.dev: (203.09, 71.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 717) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725194 reads in 269.426 CPU sec, 8.570 real sec sorting block 68, #reads = 1104218 mem = 536878414 peak = 915722240 [M::mem_process_seqs] Processed 728194 reads in 111.417 CPU sec, 3.557 real sec sorting block 69, #reads = 1103105 mem = 536879943 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306597, 8, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 182, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 579) [M::mem_pestat] mean and std.dev: (211.62, 96.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 720) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 256, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (281.31, 145.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 246, 292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 546) [M::mem_pestat] mean and std.dev: (221.05, 79.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 673) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726644 sequences (100000270 bp) in 2.553 CPU sec, 2.738 real sec... [M::process] read 726424 sequences (100000069 bp) in 1.810 CPU sec, 1.809 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306218, 3, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 227, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (66, 366) [M::mem_pestat] mean and std.dev: (213.94, 57.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 446) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (283.13, 146.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 179, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (184.90, 57.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 595) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727662 reads in 174.917 CPU sec, 5.556 real sec [M::mem_process_seqs] Processed 726892 reads in 98.998 CPU sec, 3.133 real sec sorting block 70, #reads = 1103686 mem = 536878037 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 306007, 5, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 166, 204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (21, 326) [M::mem_pestat] mean and std.dev: (177.76, 59.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 415) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (283.61, 146.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1011) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 220, 225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (63, 333) [M::mem_pestat] mean and std.dev: (197.10, 48.65) [M::mem_pestat] low and high boundaries for proper pairs: (3, 392) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727314 sequences (100000118 bp) in 2.297 CPU sec, 2.409 real sec... [M::process] read 727174 sequences (100000115 bp) in 1.790 CPU sec, 1.784 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305962, 5, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 221, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (22, 417) [M::mem_pestat] mean and std.dev: (205.17, 43.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 496) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (285.16, 147.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 200, 225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (9, 369) [M::mem_pestat] mean and std.dev: (187.80, 56.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726644 reads in 173.677 CPU sec, 5.523 real sec [M::mem_process_seqs] Processed 726424 reads in 96.794 CPU sec, 3.080 real sec sorting block 71, #reads = 1103361 mem = 536879662 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 306725, 3, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (110, 138, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 629) [M::mem_pestat] mean and std.dev: (153.92, 64.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 802) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (280.32, 144.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (127, 148, 205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 361) [M::mem_pestat] mean and std.dev: (154.83, 64.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 439) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726072 sequences (100000094 bp) in 1.812 CPU sec, 1.927 real sec... [M::process] read 725236 sequences (100000088 bp) in 1.350 CPU sec, 1.353 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306901, 1, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (126, 165, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 630) [M::mem_pestat] mean and std.dev: (193.85, 95.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 798) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (279.86, 143.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 295, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 892) [M::mem_pestat] mean and std.dev: (286.88, 118.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1133) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727314 reads in 172.819 CPU sec, 5.529 real sec [M::mem_process_seqs] Processed 727174 reads in 98.168 CPU sec, 3.137 real sec sorting block 72, #reads = 1103374 mem = 536877756 peak = 915722240 sorting block 73, #reads = 1103539 mem = 536880378 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305752, 7, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 199, 240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 444) [M::mem_pestat] mean and std.dev: (196.45, 68.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 546) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 261, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (286.16, 147.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (124, 172, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (211.00, 136.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725204 sequences (100000206 bp) in 2.292 CPU sec, 2.389 real sec... [M::process] read 724790 sequences (100000115 bp) in 1.790 CPU sec, 1.787 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305741, 1, 26) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 234, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (77, 392) [M::mem_pestat] mean and std.dev: (228.00, 45.80) [M::mem_pestat] low and high boundaries for proper pairs: (14, 455) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (288.79, 148.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 196, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (223.59, 117.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1066) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726072 reads in 175.080 CPU sec, 5.565 real sec [M::mem_process_seqs] Processed 725236 reads in 103.034 CPU sec, 3.279 real sec sorting block 74, #reads = 1102478 mem = 536878808 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305764, 5, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 156, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 480) [M::mem_pestat] mean and std.dev: (194.50, 86.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 588) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (288.25, 147.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (131, 200, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 707) [M::mem_pestat] mean and std.dev: (222.00, 116.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 899) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724714 sequences (100000139 bp) in 2.310 CPU sec, 2.430 real sec... [M::process] read 724648 sequences (100000030 bp) in 1.740 CPU sec, 1.739 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304909, 6, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 185, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 613) [M::mem_pestat] mean and std.dev: (213.88, 105.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 765) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (289.47, 147.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 197, 239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 403) [M::mem_pestat] mean and std.dev: (207.35, 64.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725204 reads in 171.706 CPU sec, 5.466 real sec [M::mem_process_seqs] Processed 724790 reads in 96.587 CPU sec, 3.063 real sec sorting block 75, #reads = 1101087 mem = 536879630 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305346, 4, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 198, 222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 406) [M::mem_pestat] mean and std.dev: (196.29, 93.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (291.54, 149.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 192, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (6, 446) [M::mem_pestat] mean and std.dev: (213.92, 71.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 534) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724402 sequences (100000253 bp) in 2.636 CPU sec, 2.744 real sec... [M::process] read 724480 sequences (100000143 bp) in 1.880 CPU sec, 1.882 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304928, 1, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 155, 202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 356) [M::mem_pestat] mean and std.dev: (164.18, 58.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 433) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 830) [M::mem_pestat] mean and std.dev: (293.34, 151.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 196, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2205) [M::mem_pestat] mean and std.dev: (226.71, 178.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2889) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724714 reads in 174.365 CPU sec, 5.535 real sec [M::mem_process_seqs] Processed 724648 reads in 97.329 CPU sec, 3.077 real sec sorting block 76, #reads = 1100760 mem = 536878162 peak = 915722240 sorting block 77, #reads = 1101433 mem = 536878035 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305323, 1, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 162, 237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 421) [M::mem_pestat] mean and std.dev: (181.69, 71.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 513) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 839) [M::mem_pestat] mean and std.dev: (294.97, 152.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1061) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (117, 200, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 564) [M::mem_pestat] mean and std.dev: (202.57, 94.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 713) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725228 sequences (100000095 bp) in 2.279 CPU sec, 2.379 real sec... [M::process] read 729610 sequences (100000154 bp) in 1.790 CPU sec, 1.798 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304812, 4, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 173, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 517) [M::mem_pestat] mean and std.dev: (168.08, 66.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 646) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (294.37, 152.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1060) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 176, 195) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (48, 293) [M::mem_pestat] mean and std.dev: (158.18, 49.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 357) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724402 reads in 169.281 CPU sec, 5.385 real sec [M::mem_process_seqs] Processed 724480 reads in 95.115 CPU sec, 3.012 real sec sorting block 78, #reads = 1101533 mem = 536879260 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305657, 2, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 215, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 570) [M::mem_pestat] mean and std.dev: (234.87, 92.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 699) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 266, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 846) [M::mem_pestat] mean and std.dev: (294.52, 155.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1071) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (138, 182, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 459) [M::mem_pestat] mean and std.dev: (189.58, 66.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 566) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728540 sequences (100000100 bp) in 2.478 CPU sec, 2.584 real sec... [M::process] read 727684 sequences (100000199 bp) in 1.870 CPU sec, 1.867 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (2, 307556, 3, 16) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 248, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 779) [M::mem_pestat] mean and std.dev: (275.58, 144.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 985) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 169, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 455) [M::mem_pestat] mean and std.dev: (171.43, 58.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 561) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725228 reads in 172.078 CPU sec, 5.463 real sec [M::mem_process_seqs] Processed 729610 reads in 100.127 CPU sec, 3.171 real sec sorting block 79, #reads = 1101774 mem = 536879845 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 307051, 7, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (201, 230, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (83, 378) [M::mem_pestat] mean and std.dev: (229.88, 67.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 498) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (278.55, 144.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 188, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 524) [M::mem_pestat] mean and std.dev: (206.33, 76.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727004 sequences (100000008 bp) in 2.247 CPU sec, 2.390 real sec... [M::process] read 726872 sequences (100000196 bp) in 1.340 CPU sec, 1.341 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306598, 6, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (127, 178, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 565) [M::mem_pestat] mean and std.dev: (213.18, 106.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 711) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 255, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (280.77, 145.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 225, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (55, 385) [M::mem_pestat] mean and std.dev: (210.15, 58.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 451) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728540 reads in 177.356 CPU sec, 5.663 real sec [M::mem_process_seqs] Processed 727684 reads in 99.260 CPU sec, 3.165 real sec sorting block 80, #reads = 1105208 mem = 536879420 peak = 915722240 sorting block 81, #reads = 1104590 mem = 536878245 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 306640, 5, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 184, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 451) [M::mem_pestat] mean and std.dev: (205.58, 99.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 603) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (282.15, 145.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 175, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (203.07, 87.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726172 sequences (100000242 bp) in 2.402 CPU sec, 2.519 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306690, 4, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 161, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 439) [M::mem_pestat] mean and std.dev: (178.50, 57.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 536) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (282.11, 145.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 199, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 511) [M::mem_pestat] mean and std.dev: (182.12, 73.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 636) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726430 sequences (100000082 bp) in 1.940 CPU sec, 1.932 real sec... [M::mem_process_seqs] Processed 727004 reads in 172.083 CPU sec, 5.469 real sec [M::mem_process_seqs] Processed 726872 reads in 95.778 CPU sec, 3.026 real sec sorting block 82, #reads = 1104313 mem = 536878401 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 306449, 10, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (119, 183, 229) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 449) [M::mem_pestat] mean and std.dev: (176.96, 61.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 559) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 802) [M::mem_pestat] mean and std.dev: (285.33, 147.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1013) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (2, 51, 150) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 446) [M::mem_pestat] mean and std.dev: (74.60, 79.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 594) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 213, 298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 570) [M::mem_pestat] mean and std.dev: (220.50, 78.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 706) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726072 sequences (100000229 bp) in 2.350 CPU sec, 2.444 real sec... [M::process] read 725254 sequences (100000100 bp) in 1.390 CPU sec, 1.383 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305985, 5, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 221, 841) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2145) [M::mem_pestat] mean and std.dev: (368.82, 292.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2797) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (283.68, 146.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 188, 213) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (39, 329) [M::mem_pestat] mean and std.dev: (169.20, 25.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 387) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726172 reads in 164.194 CPU sec, 5.227 real sec [M::mem_process_seqs] Processed 726430 reads in 92.494 CPU sec, 2.942 real sec sorting block 83, #reads = 1103506 mem = 536878509 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 306385, 2, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 227, 240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 418) [M::mem_pestat] mean and std.dev: (197.16, 68.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 507) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (284.13, 145.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1005) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (115, 212, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (200.82, 98.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724936 sequences (100000103 bp) in 2.303 CPU sec, 2.395 real sec... [M::process] read 725686 sequences (100000201 bp) in 1.880 CPU sec, 1.883 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305662, 4, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 203, 219) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (18, 353) [M::mem_pestat] mean and std.dev: (192.38, 52.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 420) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (287.62, 147.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 205, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 502) [M::mem_pestat] mean and std.dev: (196.05, 64.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 615) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726072 reads in 174.229 CPU sec, 5.547 real sec [M::mem_process_seqs] Processed 725254 reads in 98.221 CPU sec, 3.100 real sec sorting block 84, #reads = 1103212 mem = 536878921 peak = 915722240 sorting block 85, #reads = 1102175 mem = 536884357 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305430, 2, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 177, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 463) [M::mem_pestat] mean and std.dev: (185.78, 72.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 573) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (288.07, 147.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 226, 242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 412) [M::mem_pestat] mean and std.dev: (207.94, 63.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 497) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725124 sequences (100000077 bp) in 2.262 CPU sec, 2.359 real sec... [M::process] read 724936 sequences (100000127 bp) in 1.850 CPU sec, 1.849 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306212, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 168, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (188.94, 68.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 821) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 803) [M::mem_pestat] mean and std.dev: (286.88, 147.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1014) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 171, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (181.25, 64.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 807) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724936 reads in 165.159 CPU sec, 5.248 real sec [M::mem_process_seqs] Processed 725686 reads in 93.648 CPU sec, 2.960 real sec sorting block 86, #reads = 1101807 mem = 536880944 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305370, 5, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 184, 244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 438) [M::mem_pestat] mean and std.dev: (197.76, 73.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 535) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 265, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (289.63, 148.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1031) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 218, 241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 439) [M::mem_pestat] mean and std.dev: (198.58, 78.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 538) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724662 sequences (100000269 bp) in 2.203 CPU sec, 2.277 real sec... [M::process] read 724472 sequences (100000145 bp) in 1.800 CPU sec, 1.799 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305604, 2, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 198, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (23, 408) [M::mem_pestat] mean and std.dev: (209.14, 51.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 485) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (291.26, 150.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (130, 168, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 553) [M::mem_pestat] mean and std.dev: (196.06, 90.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 694) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725124 reads in 164.715 CPU sec, 5.236 real sec [M::mem_process_seqs] Processed 724936 reads in 92.526 CPU sec, 2.931 real sec sorting block 87, #reads = 1100965 mem = 536878015 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305404, 5, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 156, 183) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (42, 277) [M::mem_pestat] mean and std.dev: (161.13, 47.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 353) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (291.53, 150.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (131, 144, 279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 575) [M::mem_pestat] mean and std.dev: (178.11, 66.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 723) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724518 sequences (100000044 bp) in 2.258 CPU sec, 2.381 real sec... [M::process] read 724646 sequences (100000287 bp) in 1.829 CPU sec, 1.829 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304843, 7, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 175, 222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (42, 342) [M::mem_pestat] mean and std.dev: (185.35, 51.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 402) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (293.46, 152.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (130, 154, 207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 361) [M::mem_pestat] mean and std.dev: (165.81, 54.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 438) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724662 reads in 166.618 CPU sec, 5.301 real sec [M::mem_process_seqs] Processed 724472 reads in 94.276 CPU sec, 2.979 real sec sorting block 88, #reads = 1101460 mem = 536878316 peak = 915722240 [M::process] read 17056 sequences (2354539 bp) in 0.178 CPU sec, 0.185 real sec... sorting block 89, #reads = 1101726 mem = 536881532 peak = 915722240 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 304853, 6, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (119, 174, 236) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 470) [M::mem_pestat] mean and std.dev: (182.95, 76.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 587) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (294.54, 153.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1060) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 217, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 642) [M::mem_pestat] mean and std.dev: (199.50, 70.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 806) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (1, 7192, 0, 0) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (296.18, 154.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1053) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305229, 6, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 208, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 597) [M::mem_pestat] mean and std.dev: (199.25, 80.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 747) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 841) [M::mem_pestat] mean and std.dev: (294.67, 154.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1064) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 159, 198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (6, 326) [M::mem_pestat] mean and std.dev: (160.15, 54.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 390) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724518 reads in 169.020 CPU sec, 5.492 real sec [M::mem_process_seqs] Processed 17056 reads in 85.723 CPU sec, 2.772 real sec [M::mem_process_seqs] Processed 724646 reads in 93.634 CPU sec, 3.045 real sec sorting block 90, #reads = 1099912 mem = 536880485 peak = 915722240 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 100156172 overall: 69739905024 mem 14952.096 user 837.862 sys 526.716 real sorting block 91, #reads = 414423 mem = 201947831 peak = 915722240 [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:20260529_LH00995_0049_B23YT2HLT4.SH032_HG514.L005\tPU:L005\tSM:SH032_HG514\tLB:SH032_HG514\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 0001.SH032_HG514_R1.fastq.gz 0001.SH032_HG514_R2.fastq.gz [main] Real time: 526.749 sec; CPU: 15789.965 sec uniq header count 1 merging 92 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 384 algo: util-sort license: sentieon:util=1 output file size: 4445144701 output reads: 100737185 bam_mem_sort: 92 calls 65.110 user 1.270 sys 66.480 real bam_write: 92 calls 39.120 user 2.053 sys 42.220 real execute: 1 calls 28.622 user 2.794 sys 560.764 real merge_files: 1 calls 28.601 user 2.763 sys 33.792 real parse_chunk: 1463 calls 66.047 user 15.846 sys 83.118 real read_chunk: 3960 calls 38.781 user 28.415 sys 438.366 real sort_block: 1 calls 28.770 user 27.669 sys 422.842 real write_chunk: 2495 calls 28.160 user 2.504 sys 32.917 real overall: 2333159424 mem 1124.094 user 75.874 sys 560.781 real ls: cannot access '*.cram': No such file or directory