2026-06-05T16:35:45Z thread 359 Sample sheet being processed by common lib? Yes
2026-06-05T16:35:45Z thread 359 SampleSheet Settings:
2026-06-05T16:35:45Z thread 359 FastqCompressionFormat = gzip
2026-06-05T16:35:45Z thread 359 OverrideCycles = Y150N1;I8;I8;Y150N1
2026-06-05T16:35:45Z thread 359
2026-06-05T16:35:45Z thread 359 Index Read 2 (i5): The barcode and UMI outputs will be processed and output in Reverse Complement of Sample Sheet inputs. OverrideCycles bases for this read will be interpreted in reverse.
2026-06-05T16:35:45Z thread 359 shared-thread-linux-native-asio output is disabled
2026-06-05T16:35:45Z thread 359 bcl-convert Version 4.4.6
2026-06-05T16:35:45Z thread 359 Copyright (c) 2014-2025 Illumina, Inc.
2026-06-05T16:35:45Z thread 359 Command Line: --tiles s_3 --output-directory output --bcl-input-directory 20260529_LH00995_0049_B23YT2HLT4 --sample-sheet SampleSheet.corrected.csv
2026-06-05T16:35:45Z thread 359 Conversion Begins.
2026-06-05T16:35:45Z thread 359 Input BCL Information:
2026-06-05T16:35:45Z thread 359 Read Structure: 2026-06-05T16:35:45Z thread 359 Y1502026-06-05T16:35:45Z thread 359 ;2026-06-05T16:35:45Z thread 359 I82026-06-05T16:35:45Z thread 359 ;2026-06-05T16:35:45Z thread 359 I82026-06-05T16:35:45Z thread 359 ;2026-06-05T16:35:45Z thread 359 Y1502026-06-05T16:35:45Z thread 359
2026-06-05T16:35:45Z thread 359 RunInfo.xml file lists: 8 lanes, 6272 tiles
2026-06-05T16:35:45Z thread 359 BCL file format: cbcl
2026-06-05T16:35:45Z thread 359 Positions file format: slocs
2026-06-05T16:35:45Z thread 359 Filter file format: filter
2026-06-05T16:35:45Z thread 359 Conversion Information:
2026-06-05T16:35:45Z thread 359 Tile filtering: converting 784/6272 tiles
2026-06-05T16:35:45Z thread 359 Lane 1 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-05T16:35:45Z thread 359 Lane 2 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-05T16:35:45Z thread 359 Lane 4 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-05T16:35:45Z thread 359 Lane 5 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-05T16:35:45Z thread 359 Lane 6 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-05T16:35:45Z thread 359 Lane 7 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-05T16:35:45Z thread 359 Lane 8 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-05T16:35:45Z thread 359 Sample Count: 32
2026-06-05T16:35:45Z thread 359 Expected number of sample FASTQ files to be created: 64
2026-06-05T16:35:45Z thread 359 # CPU hw threads available: 64
2026-06-05T16:35:45Z thread 359 Parallel Tiles: 4. Threads Per Tile: 16
2026-06-05T16:35:45Z thread 359 SW compressors: 64
2026-06-05T16:35:45Z thread 359 SW decompressors: 32
2026-06-05T16:35:45Z thread 359 SW FASTQ compression level: 1
2026-06-05T16:54:37Z thread 359 Lane 3 Post-run Information:
2026-06-05T16:54:37Z thread 359 Total clusters: 4349231288
2026-06-05T16:54:37Z thread 359 Total Genomic Reads: 8698462576
2026-06-05T16:54:37Z thread 359 Total Genomic Input Gigabases 1304.77
2026-06-05T16:54:37Z thread 359 Minimum reads for a sample: 0
2026-06-05T16:54:37Z thread 359 Maximum reads for a sample: 669507064
2026-06-05T16:54:37Z thread 359 Average reads per sample: 256569574.44
2026-06-05T16:54:37Z thread 359 Undetermined reads: 488236194
2026-06-05T16:54:40Z thread 359 Conversion Complete.