File Info

Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/projects/lcvs/flowcells/20260529_LH00995_0049_B23YT2HLT4/bclconvert/L006/Reports/Quality_Metrics.csv
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5.0 KB
Workflow Run
pgrauman-main-nf-260606t153514
Published
Jun 06, 2026 9:09 AM

Content

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
6 SH032_HG514 GCCTATCA AATGGTCG 1 29933012250 29078254369 1180084095706 39.42 0.97
6 SH032_HG514 GCCTATCA AATGGTCG 2 29933012250 28593837132 1169851978815 39.08 0.96
6 40PercentHG514 CTTGGATG TCGCTATC 1 22921370850 22247488359 903199989261 39.40 0.97
6 40PercentHG514 CTTGGATG TCGCTATC 2 22921370850 21915306882 896168105244 39.10 0.96
6 20PercentHG514 AGTCTCAC CGTCCATT 1 33694722150 32719648735 1328148237307 39.42 0.97
6 20PercentHG514 AGTCTCAC CGTCCATT 2 33694722150 32196385277 1316958457808 39.09 0.96
6 10PercentHG514 CTCATCAG TACTAGCG 1 426474450 414480999 16819179192 39.44 0.97
6 10PercentHG514 CTCATCAG TACTAGCG 2 426474450 404999265 16619820204 38.97 0.95
6 5PercentHG514 TGTACCGT CCTAGAGA 1 15090979200 14673284022 595177984749 39.44 0.97
6 5PercentHG514 TGTACCGT CCTAGAGA 2 15090979200 14458745462 590699212934 39.14 0.96
6 2_5PercentHG514 AAGTCGAG CGCAATGT 1 45013257900 43682630099 1773476147702 39.40 0.97
6 2_5PercentHG514 AAGTCGAG CGCAATGT 2 45013257900 43049983427 1760435741087 39.11 0.96
6 1_25PercentHG514 CACGTTGT ACACCTCA 1 45218181150 43946850202 1783404923296 39.44 0.97
6 1_25PercentHG514 CACGTTGT ACACCTCA 2 45218181150 43308680055 1769578687326 39.13 0.96
6 SH032_HG513 TCACAGCA GAGGCATT 1 7525218900 7312254878 296738354903 39.43 0.97
6 SH032_HG513 TCACAGCA GAGGCATT 2 7525218900 7182663464 294002425598 39.07 0.95
6 3140_NA24385 CTACTTGG TACTCCAG 1 50297440500 48844766646 1983107881989 39.43 0.97
6 3140_NA24385 CTACTTGG TACTCCAG 2 50297440500 47607069970 1956998378311 38.91 0.95
6 40PercentNA24385 CCTCAGTT CAGCATAC 1 7628342400 7412452306 300713743414 39.42 0.97
6 40PercentNA24385 CCTCAGTT CAGCATAC 2 7628342400 7312220692 298663710355 39.15 0.96
6 20PercentNA24385 TCCTACCT ACTCTCCA 1 38340805050 37163107230 1509417971106 39.37 0.97
6 20PercentNA24385 TCCTACCT ACTCTCCA 2 38340805050 36593997737 1497385413551 39.05 0.95
6 10PercentNA24385 ATGGCGAA CTCTATCG 1 44398829550 43071175473 1748938313481 39.39 0.97
6 10PercentNA24385 ATGGCGAA CTCTATCG 2 44398829550 42511588246 1737422058463 39.13 0.96
6 5PercentNA24385 CTTACCTG GCAATGAG 1 44462119200 43174985876 1752415300607 39.41 0.97
6 5PercentNA24385 CTTACCTG GCAATGAG 2 44462119200 42499153111 1738349734396 39.10 0.96
6 2_5PercentNA24385 CTCGATAC AAGCTGGT 1 32675322150 31782371295 1289323381479 39.46 0.97
6 2_5PercentNA24385 CTCGATAC AAGCTGGT 2 32675322150 31244396348 1277589993944 39.10 0.96
6 1_25PercentNA24385 TCCGTGAA CACGATTC 1 15519284850 15072883728 611656224237 39.41 0.97
6 1_25PercentNA24385 TCCGTGAA CACGATTC 2 15519284850 14877570918 607690759989 39.16 0.96
6 3140_NA24143 TAGAGCTC AGAAGCCT 1 31721031900 30801093535 1250099951887 39.41 0.97
6 3140_NA24143 TAGAGCTC AGAAGCCT 2 31721031900 30307645512 1239843553599 39.09 0.96
6 D0000162_22q TGACTGAC CAGAACTG 1 0 0 0 0.00 0.00
6 D0000162_22q TGACTGAC CAGAACTG 2 0 0 0 0.00 0.00
6 D0001483_22q TAGACGTG CTCACCAA 1 38846134950 37767197590 1532393246275 39.45 0.97
6 D0001483_22q TAGACGTG CTCACCAA 2 38846134950 37307797933 1522236565825 39.19 0.96
6 D0001109_22q CCGGAATT ACCGAATG 1 27545387100 26818564581 1087354817256 39.48 0.97
6 D0001109_22q CCGGAATT ACCGAATG 2 27545387100 26459036974 1079290686949 39.18 0.96
6 D0000476_22q CTCCTAGA GCTTCACA 1 30564540450 29731007173 1205915957731 39.45 0.97
6 D0000476_22q CTCCTAGA GCTTCACA 2 30564540450 29344171049 1197185241701 39.17 0.96
6 13432478-cfDNA AGCGGAAT ACTGCACT 1 0 0 0 0.00 0.00
6 13432478-cfDNA AGCGGAAT ACTGCACT 2 0 0 0 0.00 0.00
6 13511611-cfDNA GTGAGCTT CGGATCAA 1 26303256150 25611005216 1038440613845 39.48 0.97
6 13511611-cfDNA GTGAGCTT CGGATCAA 2 26303256150 25356040645 1032848712445 39.27 0.96
6 13739430-cfDNA CGTGATCA GAATGGCA 1 71983800 70105585 2842191409 39.48 0.97
6 13739430-cfDNA CGTGATCA GAATGGCA 2 71983800 69275522 2824195088 39.23 0.96
6 13929215-cfDNA TCGCATTG ACAGCAAG 1 0 0 0 0.00 0.00
6 13929215-cfDNA TCGCATTG ACAGCAAG 2 0 0 0 0.00 0.00
6 14138939-cfDNA TGACGCAT TCAGTAGG 1 0 0 0 0.00 0.00
6 14138939-cfDNA TGACGCAT TCAGTAGG 2 0 0 0 0.00 0.00
6 14389853-cfDNA CCGATGTA CAACTTGG 1 0 0 0 0.00 0.00
6 14389853-cfDNA CCGATGTA CAACTTGG 2 0 0 0 0.00 0.00
6 14558439-cfDNA TTCGCAGT TCCGATCA 1 0 0 0 0.00 0.00
6 14558439-cfDNA TTCGCAGT TCCGATCA 2 0 0 0 0.00 0.00
6 14668865-cfDNA ACGACAGA CGCAACTA 1 0 0 0 0.00 0.00
6 14668865-cfDNA ACGACAGA CGCAACTA 2 0 0 0 0.00 0.00
6 14862332-cfDNA AGCTTGAG GATCAGAC 1 150 1 2116 14.11 0.01
6 14862332-cfDNA AGCTTGAG GATCAGAC 2 150 8 2483 16.55 0.05
6 15451964-cfDNA GAGTGGTT GCATAACG 1 27916245900 27160876148 1101504199466 39.46 0.97
6 15451964-cfDNA GAGTGGTT GCATAACG 2 27916245900 26921852436 1096357642419 39.27 0.96
6 15921737-cfDNA GCTGTAAG TACAGAGC 1 100494750 97906098 3968529969 39.49 0.97
6 15921737-cfDNA GCTGTAAG TACAGAGC 2 100494750 96722235 3943065834 39.24 0.96
6 16098090-cfDNA CCAAGACT CTCGGTAA 1 0 0 0 0.00 0.00
6 16098090-cfDNA CCAAGACT CTCGGTAA 2 0 0 0 0.00 0.00
6 Undetermined 1 37719743550 32493717837 1392582784215 36.92 0.86
6 Undetermined 2 37719743550 31962349774 1372688489872 36.39 0.85
67 rows