Processes


BCL_TO_FASTQ:BCLCONVERT	8
BCL_TO_FASTQ:SAMPLESHEET_CHECK	1
DAQ:FLOWCELL_QC	1
DAQ:CAT_FASTQ	32
FASTQ_NGSCHECKMATE:NGSCHECKMATE_FASTQ	32	9
FASTQ_NGSCHECKMATE:NGSCHECKMATE_VAFNCM	1
DAQ:ESTIMATEGENDER	32
DAQ:MERGE_GENDER	1
DAQ:FASTP	256
DAQ:SENTIEON_BWAMEM	640	33
DAQ:SAMTOOLS_MERGE	32	8
DAQ:MARKDUPLICATES_SENTIEON	32
BAM_POSTDEDUP_QC:SAMTOOLS_STATS	32
BAM_POSTDEDUP_QC:MOSDEPTH	32
BAM_POSTDEDUP_QC:SENTIEON_HSMETRICS	32
DAQ:AGGREGATE_POSTDEDUP_QC	1
DAQ:QC_JSON_TO_CSV	1
DAQ:MULTIQC	1
DAQ:WRITE_TRACKER_YML	1
GERMLINE_CNV:ClusterPanelRegions
GERMLINE_CNV:CalcPanelCoverage
GERMLINE_CNV:ProcessBatch
GERMLINE_CNV:ModelSingle
GERMLINE_CNV:AggregateBatchPerSampleData