cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o SH032_HG514.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1920.288 CPU sec, 73.372 real sec [M::process] read 728272 sequences (100000208 bp) in 1.360 CPU sec, 1.366 real sec... [M::process] read 727218 sequences (100000225 bp) in 1.715 CPU sec, 1.798 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 307039, 1, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 148, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (2, 362) [M::mem_pestat] mean and std.dev: (152.22, 26.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 434) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 252, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 776) [M::mem_pestat] mean and std.dev: (276.81, 142.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 980) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 205, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (251.12, 140.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 883) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726688 sequences (100000027 bp) in 1.594 CPU sec, 1.602 real sec... [M::process] read 726640 sequences (100000078 bp) in 1.892 CPU sec, 1.934 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 306508, 2, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 184, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 469) [M::mem_pestat] mean and std.dev: (176.15, 55.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 581) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (281.54, 144.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (132, 147, 190) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (16, 306) [M::mem_pestat] mean and std.dev: (152.00, 50.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 364) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728272 reads in 175.731 CPU sec, 5.740 real sec [M::mem_process_seqs] Processed 727218 reads in 94.384 CPU sec, 3.179 real sec sorting block 0, #reads = 1104436 mem = 536880204 peak = 601862144 [M::process] read 726864 sequences (100000275 bp) in 1.673 CPU sec, 1.766 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 306284, 0, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 237, 292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 566) [M::mem_pestat] mean and std.dev: (213.57, 77.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 703) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (282.90, 144.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 221, 288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 546) [M::mem_pestat] mean and std.dev: (210.33, 63.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 675) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727328 sequences (100000277 bp) in 1.415 CPU sec, 1.835 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 306092, 3, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 216, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 465) [M::mem_pestat] mean and std.dev: (208.08, 62.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 567) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (281.78, 144.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 175, 197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (32, 307) [M::mem_pestat] mean and std.dev: (166.00, 32.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 362) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 306306, 5, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (118, 197, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (203.42, 105.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (282.24, 144.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 216, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 694) [M::mem_pestat] mean and std.dev: (230.05, 110.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 869) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726688 reads in 230.987 CPU sec, 7.836 real sec [M::mem_process_seqs] Processed 726640 reads in 160.342 CPU sec, 5.466 real sec [M::mem_process_seqs] Processed 726864 reads in 167.683 CPU sec, 5.734 real sec sorting block 1, #reads = 1103347 mem = 536876767 peak = 760197120 [M::process] read 728324 sequences (100000011 bp) in 1.807 CPU sec, 1.919 real sec... sorting block 2, #reads = 1103178 mem = 536879345 peak = 914321408 [M::process] read 727692 sequences (100000274 bp) in 1.891 CPU sec, 1.972 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 307000, 6, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 165, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 458) [M::mem_pestat] mean and std.dev: (189.36, 56.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 560) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 252, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 770) [M::mem_pestat] mean and std.dev: (276.16, 142.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 972) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 220, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (262.30, 167.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728324 reads in 85.967 CPU sec, 2.716 real sec [M::process] read 724894 sequences (100000225 bp) in 1.539 CPU sec, 1.572 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 306777, 7, 7) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 223, 2969) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8605) [M::mem_pestat] mean and std.dev: (1038.62, 1562.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11423) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (280.03, 143.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 994) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306781, 8, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (129, 183, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 537) [M::mem_pestat] mean and std.dev: (173.47, 72.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 673) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 253, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 774) [M::mem_pestat] mean and std.dev: (277.30, 142.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 977) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 198, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 709) [M::mem_pestat] mean and std.dev: (207.41, 84.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 894) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727328 reads in 242.531 CPU sec, 7.792 real sec [M::process] read 724286 sequences (100000149 bp) in 1.443 CPU sec, 1.463 real sec... sorting block 3, #reads = 1104501 mem = 536881186 peak = 914321408 [M::mem_process_seqs] Processed 727692 reads in 98.084 CPU sec, 3.149 real sec sorting block 4, #reads = 1103696 mem = 536879662 peak = 995700736 [M::process] read 724062 sequences (100000126 bp) in 1.561 CPU sec, 1.634 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (25, 305655, 6, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (124, 198, 278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 586) [M::mem_pestat] mean and std.dev: (206.64, 89.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 740) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 265, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (288.10, 146.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 208, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 931) [M::mem_pestat] mean and std.dev: (255.63, 169.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1194) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723492 sequences (100000005 bp) in 1.432 CPU sec, 1.467 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305250, 3, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 216, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 503) [M::mem_pestat] mean and std.dev: (197.13, 59.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 618) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 267, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (289.10, 145.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1010) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 173, 236) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 422) [M::mem_pestat] mean and std.dev: (179.50, 57.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 515) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724894 reads in 158.489 CPU sec, 5.126 real sec [M::mem_process_seqs] Processed 724286 reads in 89.932 CPU sec, 2.895 real sec sorting block 5, #reads = 1103005 mem = 536877920 peak = 995700736 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305419, 3, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (148, 160, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 523) [M::mem_pestat] mean and std.dev: (178.08, 61.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (292.26, 148.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1034) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 206, 278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (197.73, 67.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 638) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723282 sequences (100000131 bp) in 1.844 CPU sec, 1.942 real sec... [M::process] read 723164 sequences (100000009 bp) in 1.501 CPU sec, 1.509 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 304787, 6, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 190, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 544) [M::mem_pestat] mean and std.dev: (208.38, 99.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 682) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 271, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (292.74, 147.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 219, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (246.56, 103.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1035) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724062 reads in 157.223 CPU sec, 5.056 real sec [M::mem_process_seqs] Processed 723492 reads in 89.392 CPU sec, 2.868 real sec sorting block 6, #reads = 1101378 mem = 536880065 peak = 1021784064 [M::process] read 722870 sequences (100000009 bp) in 1.811 CPU sec, 1.972 real sec... [M::process] read 722486 sequences (100000045 bp) in 1.482 CPU sec, 1.485 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 304030, 6, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 188, 308) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 612) [M::mem_pestat] mean and std.dev: (204.57, 86.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 764) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (296.45, 150.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1045) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 191, 207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (93, 283) [M::mem_pestat] mean and std.dev: (182.92, 31.78) [M::mem_pestat] low and high boundaries for proper pairs: (55, 321) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723164 reads in 84.886 CPU sec, 2.695 real sec sorting block 7, #reads = 1100940 mem = 536879318 peak = 1021784064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304875, 6, 28) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 217, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 508) [M::mem_pestat] mean and std.dev: (223.53, 71.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 614) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (294.51, 148.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 212, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 721) [M::mem_pestat] mean and std.dev: (214.85, 102.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722352 sequences (100000004 bp) in 1.522 CPU sec, 1.531 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304484, 1, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 159, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 416) [M::mem_pestat] mean and std.dev: (161.47, 48.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 514) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 828) [M::mem_pestat] mean and std.dev: (296.80, 149.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1045) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (114, 141, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (187.50, 98.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 910) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723282 reads in 241.505 CPU sec, 7.757 real sec [M::mem_process_seqs] Processed 722870 reads in 97.723 CPU sec, 3.159 real sec sorting block 8, #reads = 1100385 mem = 536879817 peak = 1021784064 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 304355, 6, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 315, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (281.37, 84.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 802) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 276, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (297.87, 149.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1046) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (141, 208, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (207.20, 78.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 649) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725566 sequences (100000286 bp) in 1.793 CPU sec, 1.968 real sec... [M::process] read 727452 sequences (100000225 bp) in 1.452 CPU sec, 1.462 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304309, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 161, 182) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (32, 282) [M::mem_pestat] mean and std.dev: (147.09, 30.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 332) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 835) [M::mem_pestat] mean and std.dev: (298.56, 150.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1054) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 194, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 461) [M::mem_pestat] mean and std.dev: (179.15, 56.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 567) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722486 reads in 158.938 CPU sec, 5.148 real sec sorting block 9, #reads = 1100354 mem = 536881200 peak = 1027809280 [M::mem_process_seqs] Processed 722352 reads in 89.723 CPU sec, 2.903 real sec sorting block 10, #reads = 1099822 mem = 536878045 peak = 1046982656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 305473, 4, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 174, 237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 429) [M::mem_pestat] mean and std.dev: (183.74, 61.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 525) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (287.67, 147.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 267, 898) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2316) [M::mem_pestat] mean and std.dev: (331.31, 252.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3025) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726726 sequences (100000222 bp) in 1.625 CPU sec, 1.869 real sec... [M::process] read 726614 sequences (100000120 bp) in 1.322 CPU sec, 1.330 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306453, 3, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (116, 177, 216) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 416) [M::mem_pestat] mean and std.dev: (176.39, 63.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 516) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (280.17, 143.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 191, 223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (46, 341) [M::mem_pestat] mean and std.dev: (191.00, 43.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 400) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725566 reads in 158.066 CPU sec, 5.137 real sec [M::mem_process_seqs] Processed 727452 reads in 89.931 CPU sec, 2.892 real sec sorting block 11, #reads = 1101451 mem = 536880966 peak = 1046982656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306498, 2, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (116, 140, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (165.57, 70.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (282.94, 145.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 174, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 482) [M::mem_pestat] mean and std.dev: (178.24, 61.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 594) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726282 sequences (100000277 bp) in 1.808 CPU sec, 2.017 real sec... [M::process] read 725874 sequences (100000081 bp) in 1.417 CPU sec, 1.450 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 306927, 2, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 279, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (254.64, 143.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (282.97, 144.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 186, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 452) [M::mem_pestat] mean and std.dev: (190.38, 60.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 552) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726726 reads in 160.208 CPU sec, 5.195 real sec [M::mem_process_seqs] Processed 726614 reads in 90.799 CPU sec, 2.933 real sec sorting block 12, #reads = 1104051 mem = 536879250 peak = 1046982656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305762, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 172, 207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 357) [M::mem_pestat] mean and std.dev: (170.69, 56.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 432) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (284.11, 145.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (113, 227, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 548) [M::mem_pestat] mean and std.dev: (218.93, 110.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 693) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727066 sequences (100000158 bp) in 1.758 CPU sec, 1.980 real sec... [M::process] read 727246 sequences (100000018 bp) in 1.431 CPU sec, 1.449 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 306202, 9, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (233, 418, 882) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2180) [M::mem_pestat] mean and std.dev: (470.50, 284.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2829) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 261, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (285.16, 145.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1009) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (147, 185, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 885) [M::mem_pestat] mean and std.dev: (215.38, 107.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1131) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726282 reads in 159.545 CPU sec, 5.193 real sec [M::mem_process_seqs] Processed 725874 reads in 89.428 CPU sec, 2.945 real sec sorting block 13, #reads = 1103538 mem = 536877554 peak = 1046982656 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306280, 6, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 173, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 440) [M::mem_pestat] mean and std.dev: (181.75, 68.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 537) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (280.94, 143.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 991) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (127, 156, 223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 415) [M::mem_pestat] mean and std.dev: (148.82, 33.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 511) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 14, #reads = 1102809 mem = 536879144 peak = 1069490176 [M::process] read 725904 sequences (100000024 bp) in 1.850 CPU sec, 2.095 real sec... [M::process] read 724382 sequences (100000076 bp) in 1.477 CPU sec, 1.529 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 306559, 4, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 195, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (21, 391) [M::mem_pestat] mean and std.dev: (196.31, 47.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 465) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 781) [M::mem_pestat] mean and std.dev: (279.52, 143.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 986) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 227, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (55, 375) [M::mem_pestat] mean and std.dev: (207.50, 54.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 439) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727066 reads in 160.898 CPU sec, 5.233 real sec [M::mem_process_seqs] Processed 727246 reads in 91.098 CPU sec, 2.927 real sec sorting block 15, #reads = 1103461 mem = 536877408 peak = 1069490176 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305849, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (127, 200, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 520) [M::mem_pestat] mean and std.dev: (211.33, 95.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 260, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (283.33, 143.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 239, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 503) [M::mem_pestat] mean and std.dev: (209.35, 61.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 619) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724244 sequences (100000082 bp) in 1.815 CPU sec, 1.960 real sec... [M::process] read 723920 sequences (100000118 bp) in 1.529 CPU sec, 1.551 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305575, 5, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 220, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (257.36, 112.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (290.51, 147.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1025) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (123, 173, 235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 459) [M::mem_pestat] mean and std.dev: (176.75, 57.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 571) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725904 reads in 156.594 CPU sec, 5.080 real sec [M::mem_process_seqs] Processed 724382 reads in 88.212 CPU sec, 2.916 real sec sorting block 16, #reads = 1103514 mem = 536878559 peak = 1069490176 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305342, 4, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (105, 149, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 570) [M::mem_pestat] mean and std.dev: (181.58, 100.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 725) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (290.71, 146.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1022) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 723822 sequences (100000201 bp) in 1.644 CPU sec, 1.893 real sec... [M::process] read 723430 sequences (100000063 bp) in 1.525 CPU sec, 1.529 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 304705, 5, 15) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (291.69, 147.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1030) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 308, 1144) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3106) [M::mem_pestat] mean and std.dev: (284.50, 277.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4087) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724244 reads in 157.123 CPU sec, 5.113 real sec [M::mem_process_seqs] Processed 723920 reads in 90.090 CPU sec, 2.922 real sec sorting block 17, #reads = 1101322 mem = 536879863 peak = 1069490176 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305143, 3, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 171, 272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 484) [M::mem_pestat] mean and std.dev: (209.79, 63.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 590) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 272, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (293.70, 148.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1035) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 184, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (187.70, 88.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 908) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 18, #reads = 1101475 mem = 536881271 peak = 1092177920 [M::process] read 723594 sequences (100000046 bp) in 1.771 CPU sec, 2.023 real sec... [M::process] read 723212 sequences (100000031 bp) in 1.555 CPU sec, 1.558 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304991, 2, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 201, 304) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (185.20, 72.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (295.22, 149.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 262, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 977) [M::mem_pestat] mean and std.dev: (327.06, 249.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1327) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723822 reads in 156.526 CPU sec, 5.096 real sec [M::mem_process_seqs] Processed 723430 reads in 89.207 CPU sec, 2.875 real sec sorting block 19, #reads = 1101168 mem = 536879942 peak = 1092177920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 305246, 3, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 225, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 686) [M::mem_pestat] mean and std.dev: (239.50, 95.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 865) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 273, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (295.20, 149.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (124, 150, 185) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (2, 307) [M::mem_pestat] mean and std.dev: (138.00, 29.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 368) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722594 sequences (100000201 bp) in 1.769 CPU sec, 1.951 real sec... [M::process] read 722358 sequences (100000276 bp) in 1.491 CPU sec, 1.512 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304648, 9, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 236, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 438) [M::mem_pestat] mean and std.dev: (206.38, 68.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 532) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 831) [M::mem_pestat] mean and std.dev: (297.09, 150.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (129, 149, 220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 402) [M::mem_pestat] mean and std.dev: (154.50, 47.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 493) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723594 reads in 158.010 CPU sec, 5.149 real sec [M::mem_process_seqs] Processed 723212 reads in 89.079 CPU sec, 2.885 real sec sorting block 20, #reads = 1101218 mem = 536877822 peak = 1092177920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 304405, 0, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 171, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 461) [M::mem_pestat] mean and std.dev: (187.07, 67.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 565) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 838) [M::mem_pestat] mean and std.dev: (299.23, 151.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1058) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (117, 153, 239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 483) [M::mem_pestat] mean and std.dev: (179.50, 82.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 605) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727772 sequences (100000147 bp) in 1.710 CPU sec, 2.123 real sec... [M::process] read 727226 sequences (100000183 bp) in 1.564 CPU sec, 1.569 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 304460, 5, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 185, 299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 599) [M::mem_pestat] mean and std.dev: (219.53, 80.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 749) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 399) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 841) [M::mem_pestat] mean and std.dev: (299.45, 151.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1062) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 195, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 461) [M::mem_pestat] mean and std.dev: (199.53, 71.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 561) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722594 reads in 156.288 CPU sec, 5.094 real sec [M::mem_process_seqs] Processed 722358 reads in 89.057 CPU sec, 2.840 real sec sorting block 21, #reads = 1100410 mem = 536878449 peak = 1092177920 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 307007, 2, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (111, 145, 235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 483) [M::mem_pestat] mean and std.dev: (164.92, 53.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 607) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (279.23, 144.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 989) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 302, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (245.31, 90.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 798) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 22, #reads = 1099787 mem = 536875168 peak = 1092177920 [M::process] read 726496 sequences (100000034 bp) in 1.748 CPU sec, 2.123 real sec... [M::process] read 726634 sequences (100000116 bp) in 1.484 CPU sec, 1.573 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306684, 6, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 180, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (231.31, 142.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 901) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (281.47, 144.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (105, 109, 145) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (25, 225) [M::mem_pestat] mean and std.dev: (119.20, 39.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 276) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727772 reads in 156.316 CPU sec, 5.083 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (6, 306479, 1, 21) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (282.88, 145.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 204, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 416) [M::mem_pestat] mean and std.dev: (200.24, 57.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 500) [M::mem_pestat] skip orientation RR [M::process] read 725740 sequences (100000134 bp) in 1.484 CPU sec, 1.532 real sec... [M::mem_process_seqs] Processed 726496 reads in 83.148 CPU sec, 2.713 real sec sorting block 23, #reads = 1103525 mem = 536878289 peak = 1092177920 [M::mem_process_seqs] Processed 727226 reads in 210.174 CPU sec, 6.814 real sec sorting block 24, #reads = 1103346 mem = 536879065 peak = 1103724544 [M::process] read 725620 sequences (100000251 bp) in 1.924 CPU sec, 2.136 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306108, 2, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 288, 1782) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4974) [M::mem_pestat] mean and std.dev: (1030.06, 1266.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (286.82, 147.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 212, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 498) [M::mem_pestat] mean and std.dev: (218.28, 59.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 605) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726162 sequences (100000046 bp) in 1.636 CPU sec, 1.692 real sec... [M::mem_process_seqs] Processed 725740 reads in 84.452 CPU sec, 2.760 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306288, 2, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 219, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 449) [M::mem_pestat] mean and std.dev: (214.11, 65.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 545) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (283.36, 145.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1004) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 233, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (221.38, 92.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 306144, 6, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 175, 256) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 454) [M::mem_pestat] mean and std.dev: (191.87, 70.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 553) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (286.36, 146.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1010) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (132, 239, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 480) [M::mem_pestat] mean and std.dev: (188.60, 66.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 596) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726634 reads in 245.056 CPU sec, 7.979 real sec [M::process] read 725908 sequences (100000229 bp) in 1.548 CPU sec, 1.608 real sec... [M::mem_process_seqs] Processed 725620 reads in 96.445 CPU sec, 3.156 real sec sorting block 25, #reads = 1103277 mem = 536879114 peak = 1103724544 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306643, 7, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 182, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 705) [M::mem_pestat] mean and std.dev: (188.80, 90.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 895) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (283.72, 144.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 291, 485) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1111) [M::mem_pestat] mean and std.dev: (294.40, 136.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1424) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 26, #reads = 1102788 mem = 536879765 peak = 1106960384 [M::process] read 724684 sequences (100000211 bp) in 1.873 CPU sec, 2.341 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 306010, 4, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 194, 231) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 433) [M::mem_pestat] mean and std.dev: (170.30, 44.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 534) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (284.14, 145.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 196, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1180) [M::mem_pestat] mean and std.dev: (195.40, 109.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1519) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724296 sequences (100000111 bp) in 1.442 CPU sec, 1.488 real sec... [M::mem_process_seqs] Processed 726162 reads in 156.656 CPU sec, 5.098 real sec [M::mem_process_seqs] Processed 725908 reads in 90.146 CPU sec, 2.902 real sec sorting block 27, #reads = 1103383 mem = 536878401 peak = 1106960384 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 305602, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 192, 228) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 406) [M::mem_pestat] mean and std.dev: (196.00, 79.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 515) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (289.76, 147.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 251, 734) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1854) [M::mem_pestat] mean and std.dev: (293.77, 205.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2414) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724056 sequences (100000204 bp) in 2.036 CPU sec, 2.324 real sec... [M::process] read 723644 sequences (100000152 bp) in 1.401 CPU sec, 1.411 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 305207, 2, 13) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (289.62, 146.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 276, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 697) [M::mem_pestat] mean and std.dev: (296.00, 114.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 850) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724684 reads in 156.986 CPU sec, 5.151 real sec [M::mem_process_seqs] Processed 724296 reads in 89.669 CPU sec, 2.917 real sec sorting block 28, #reads = 1102132 mem = 536878619 peak = 1106960384 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 305094, 5, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 221, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 543) [M::mem_pestat] mean and std.dev: (222.44, 67.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 666) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 270, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (292.20, 148.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1030) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 218, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 417) [M::mem_pestat] mean and std.dev: (195.71, 59.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 501) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723662 sequences (100000156 bp) in 1.881 CPU sec, 2.294 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305257, 8, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 258, 277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 465) [M::mem_pestat] mean and std.dev: (220.73, 58.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 559) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (175, 272, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 817) [M::mem_pestat] mean and std.dev: (293.13, 147.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1031) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (140, 153, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 524) [M::mem_pestat] mean and std.dev: (173.08, 51.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723186 sequences (100000027 bp) in 1.374 CPU sec, 1.383 real sec... [M::mem_process_seqs] Processed 724056 reads in 156.506 CPU sec, 5.136 real sec [M::mem_process_seqs] Processed 723644 reads in 89.756 CPU sec, 2.895 real sec sorting block 29, #reads = 1101112 mem = 536878681 peak = 1106960384 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305525, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 193, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 500) [M::mem_pestat] mean and std.dev: (186.41, 63.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 619) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (294.56, 149.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 220, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (232.71, 121.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 30, #reads = 1101585 mem = 536879537 peak = 1120763904 [M::process] read 723324 sequences (100000263 bp) in 2.052 CPU sec, 2.341 real sec... [M::process] read 722920 sequences (100000285 bp) in 1.560 CPU sec, 1.567 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 304572, 12, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 205, 281) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 535) [M::mem_pestat] mean and std.dev: (205.62, 95.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 662) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 274, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (295.74, 149.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (50, 88, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 941) [M::mem_pestat] mean and std.dev: (144.42, 128.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1238) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 212, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1045) [M::mem_pestat] mean and std.dev: (278.75, 149.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1336) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723662 reads in 158.892 CPU sec, 5.202 real sec [M::mem_process_seqs] Processed 723186 reads in 90.862 CPU sec, 2.915 real sec sorting block 31, #reads = 1101327 mem = 536875464 peak = 1120763904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 304971, 4, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 220, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 479) [M::mem_pestat] mean and std.dev: (200.30, 67.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 586) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 275, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 834) [M::mem_pestat] mean and std.dev: (296.99, 150.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1053) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 204, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 670) [M::mem_pestat] mean and std.dev: (227.29, 86.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 839) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722684 sequences (100000156 bp) in 1.797 CPU sec, 2.104 real sec... [M::process] read 724638 sequences (100000209 bp) in 1.593 CPU sec, 1.636 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305058, 4, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 229, 1922) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5488) [M::mem_pestat] mean and std.dev: (962.93, 1564.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7271) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 276, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 837) [M::mem_pestat] mean and std.dev: (298.16, 151.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1057) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (138, 243, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 714) [M::mem_pestat] mean and std.dev: (220.45, 94.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723324 reads in 156.380 CPU sec, 5.105 real sec [M::mem_process_seqs] Processed 722920 reads in 88.767 CPU sec, 2.897 real sec sorting block 32, #reads = 1100983 mem = 536879461 peak = 1120763904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305018, 3, 11) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 196, 286) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 512) [M::mem_pestat] mean and std.dev: (215.95, 52.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 277, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 832) [M::mem_pestat] mean and std.dev: (298.46, 150.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1050) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (122, 227, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (167.78, 69.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 618) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728180 sequences (100000213 bp) in 2.017 CPU sec, 2.270 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 305133, 4, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 179, 217) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 381) [M::mem_pestat] mean and std.dev: (173.06, 60.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 463) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 815) [M::mem_pestat] mean and std.dev: (291.04, 148.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1029) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 176, 211) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (16, 341) [M::mem_pestat] mean and std.dev: (155.38, 36.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 406) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727326 sequences (100000081 bp) in 1.591 CPU sec, 1.598 real sec... [M::mem_process_seqs] Processed 722684 reads in 157.359 CPU sec, 5.154 real sec [M::mem_process_seqs] Processed 724638 reads in 90.636 CPU sec, 2.964 real sec sorting block 33, #reads = 1100345 mem = 536879101 peak = 1120763904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 307339, 7, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 227, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (34, 399) [M::mem_pestat] mean and std.dev: (189.64, 58.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 472) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 782) [M::mem_pestat] mean and std.dev: (278.13, 144.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 988) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 186, 213) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (39, 329) [M::mem_pestat] mean and std.dev: (192.00, 41.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 387) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 34, #reads = 1100505 mem = 536878671 peak = 1141325824 [M::process] read 726448 sequences (100000118 bp) in 1.986 CPU sec, 2.249 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306898, 3, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 226, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (48, 483) [M::mem_pestat] mean and std.dev: (234.78, 42.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (280.66, 144.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 994) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 382, 456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 872) [M::mem_pestat] mean and std.dev: (324.71, 136.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1080) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726920 sequences (100000127 bp) in 1.587 CPU sec, 1.619 real sec... [M::mem_process_seqs] Processed 728180 reads in 155.913 CPU sec, 5.037 real sec [M::mem_process_seqs] Processed 727326 reads in 88.460 CPU sec, 2.812 real sec sorting block 35, #reads = 1105234 mem = 536878538 peak = 1141325824 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 306256, 4, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (130, 160, 716) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1888) [M::mem_pestat] mean and std.dev: (342.25, 316.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2474) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (284.47, 146.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (129, 134, 185) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (17, 297) [M::mem_pestat] mean and std.dev: (152.53, 50.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 354) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725964 sequences (100000097 bp) in 2.326 CPU sec, 2.562 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306199, 2, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 193, 291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 551) [M::mem_pestat] mean and std.dev: (200.80, 70.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 681) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 794) [M::mem_pestat] mean and std.dev: (282.96, 146.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 200, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (224.37, 103.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 827) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726448 reads in 156.721 CPU sec, 5.063 real sec [M::process] read 725310 sequences (100000017 bp) in 1.716 CPU sec, 1.768 real sec... [M::mem_process_seqs] Processed 726920 reads in 89.491 CPU sec, 2.877 real sec sorting block 36, #reads = 1103512 mem = 536879699 peak = 1141325824 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306161, 1, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 171, 431) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1003) [M::mem_pestat] mean and std.dev: (231.82, 124.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1289) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 261, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (286.26, 147.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1017) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 315, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 842) [M::mem_pestat] mean and std.dev: (255.50, 93.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1063) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725652 sequences (100000250 bp) in 2.055 CPU sec, 2.369 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 305732, 5, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 212, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 532) [M::mem_pestat] mean and std.dev: (208.11, 94.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 656) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 263, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (287.39, 147.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1015) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 725192 sequences (100000072 bp) in 1.563 CPU sec, 1.602 real sec... [M::mem_process_seqs] Processed 725964 reads in 157.509 CPU sec, 5.120 real sec [M::mem_process_seqs] Processed 725310 reads in 89.480 CPU sec, 2.900 real sec sorting block 37, #reads = 1103600 mem = 536879102 peak = 1141325824 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306019, 5, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 281, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 563) [M::mem_pestat] mean and std.dev: (241.21, 67.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 680) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 800) [M::mem_pestat] mean and std.dev: (285.92, 146.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1010) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 253, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 614) [M::mem_pestat] mean and std.dev: (232.25, 73.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 765) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 38, #reads = 1102123 mem = 536877470 peak = 1141325824 [M::process] read 724530 sequences (100000117 bp) in 2.345 CPU sec, 2.709 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305381, 5, 25) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 186, 227) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (56, 341) [M::mem_pestat] mean and std.dev: (183.39, 27.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 398) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 262, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (285.94, 145.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (126, 206, 295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 633) [M::mem_pestat] mean and std.dev: (198.65, 93.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 802) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725652 reads in 156.104 CPU sec, 5.104 real sec [M::process] read 724262 sequences (100000092 bp) in 1.741 CPU sec, 1.816 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305930, 8, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 175, 217) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (25, 345) [M::mem_pestat] mean and std.dev: (169.00, 33.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 409) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (290.36, 148.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1028) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 165, 208) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (49, 314) [M::mem_pestat] mean and std.dev: (168.58, 33.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 367) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724530 reads in 82.337 CPU sec, 2.648 real sec [M::process] read 725092 sequences (100000170 bp) in 1.633 CPU sec, 1.691 real sec... sorting block 39, #reads = 1101914 mem = 536881164 peak = 1141325824 [M::mem_process_seqs] Processed 725192 reads in 208.598 CPU sec, 6.786 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 305406, 7, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (122, 176, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 548) [M::mem_pestat] mean and std.dev: (190.74, 99.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 690) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 809) [M::mem_pestat] mean and std.dev: (289.95, 146.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 195, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (192.26, 69.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 40, #reads = 1102070 mem = 536879057 peak = 1161302016 [M::process] read 723956 sequences (100000256 bp) in 2.156 CPU sec, 2.488 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (27, 305788, 7, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 194, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 528) [M::mem_pestat] mean and std.dev: (190.80, 80.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 658) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 265, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (289.27, 148.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (125, 192, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 515) [M::mem_pestat] mean and std.dev: (184.46, 63.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 645) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724262 reads in 163.913 CPU sec, 5.305 real sec [M::mem_process_seqs] Processed 725092 reads in 89.257 CPU sec, 2.901 real sec [M::process] read 723496 sequences (100000264 bp) in 1.789 CPU sec, 1.856 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305200, 7, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 214, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 415) [M::mem_pestat] mean and std.dev: (194.69, 66.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 501) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (174, 269, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (292.54, 148.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1034) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 231, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 682) [M::mem_pestat] mean and std.dev: (213.68, 79.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 861) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 41, #reads = 1101713 mem = 536877784 peak = 1161302016 [M::process] read 723280 sequences (100000149 bp) in 1.957 CPU sec, 2.266 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 304973, 2, 21) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (294.31, 149.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 235, 297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 595) [M::mem_pestat] mean and std.dev: (214.11, 70.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 744) [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723956 reads in 155.341 CPU sec, 5.023 real sec [M::process] read 723078 sequences (100000151 bp) in 1.543 CPU sec, 1.616 real sec... [M::mem_process_seqs] Processed 723496 reads in 89.689 CPU sec, 2.865 real sec sorting block 42, #reads = 1101172 mem = 536882067 peak = 1161302016 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305249, 7, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 188, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 635) [M::mem_pestat] mean and std.dev: (205.30, 81.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 791) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (295.50, 150.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 218, 945) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2479) [M::mem_pestat] mean and std.dev: (540.86, 629.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3246) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 722912 sequences (100000233 bp) in 2.050 CPU sec, 2.360 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 304472, 2, 22) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 179, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 452) [M::mem_pestat] mean and std.dev: (193.31, 64.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 553) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (176, 272, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (295.47, 150.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1044) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 199, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 459) [M::mem_pestat] mean and std.dev: (181.24, 50.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 561) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723280 reads in 155.400 CPU sec, 5.059 real sec [M::mem_process_seqs] Processed 723078 reads in 89.033 CPU sec, 2.849 real sec [M::process] read 722664 sequences (100000228 bp) in 1.628 CPU sec, 1.757 real sec... sorting block 43, #reads = 1101153 mem = 536881702 peak = 1161302016 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304659, 2, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (98, 144, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 596) [M::mem_pestat] mean and std.dev: (166.06, 75.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 762) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (177, 273, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (295.78, 149.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (105, 183, 238) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (188.69, 84.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 637) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 44, #reads = 1100521 mem = 536878874 peak = 1161302016 [M::process] read 728164 sequences (100000122 bp) in 1.937 CPU sec, 2.296 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 304814, 2, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (112, 182, 237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (170.93, 59.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (178, 275, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (297.35, 150.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1046) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 161, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 483) [M::mem_pestat] mean and std.dev: (204.40, 80.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 594) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722912 reads in 155.300 CPU sec, 5.115 real sec [M::process] read 728144 sequences (100000074 bp) in 1.611 CPU sec, 1.630 real sec... [M::mem_process_seqs] Processed 722664 reads in 88.556 CPU sec, 2.918 real sec sorting block 45, #reads = 1100138 mem = 536880706 peak = 1161302016 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 306659, 2, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 239, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 818) [M::mem_pestat] mean and std.dev: (260.48, 119.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (280.18, 145.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (127, 145, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 448) [M::mem_pestat] mean and std.dev: (181.43, 80.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 555) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727120 sequences (100000030 bp) in 2.263 CPU sec, 2.570 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306375, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 155, 236) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 442) [M::mem_pestat] mean and std.dev: (178.47, 58.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 545) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 254, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (279.11, 144.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 996) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 205, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (232.40, 91.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 805) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727252 sequences (100000042 bp) in 1.677 CPU sec, 1.696 real sec... [M::mem_process_seqs] Processed 728164 reads in 162.981 CPU sec, 5.273 real sec [M::mem_process_seqs] Processed 728144 reads in 92.824 CPU sec, 3.014 real sec sorting block 46, #reads = 1102939 mem = 536878351 peak = 1161302016 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306204, 9, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 210, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 608) [M::mem_pestat] mean and std.dev: (222.12, 72.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 755) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (280.58, 144.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 994) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 248, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 678) [M::mem_pestat] mean and std.dev: (244.05, 96.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 845) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727576 sequences (100000085 bp) in 1.984 CPU sec, 2.219 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 306004, 5, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 178, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 458) [M::mem_pestat] mean and std.dev: (199.23, 51.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 554) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (281.05, 144.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 998) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (124, 152, 275) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 577) [M::mem_pestat] mean and std.dev: (179.83, 70.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 728) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728070 sequences (100000206 bp) in 1.652 CPU sec, 1.773 real sec... [M::mem_process_seqs] Processed 727120 reads in 163.210 CPU sec, 5.306 real sec [M::mem_process_seqs] Processed 727252 reads in 93.523 CPU sec, 3.031 real sec sorting block 47, #reads = 1103989 mem = 536878837 peak = 1161302016 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305849, 3, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 231, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 869) [M::mem_pestat] mean and std.dev: (238.07, 119.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1113) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 255, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 787) [M::mem_pestat] mean and std.dev: (280.25, 144.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 994) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (136, 196, 290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 598) [M::mem_pestat] mean and std.dev: (211.75, 116.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 752) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 729114 sequences (100000176 bp) in 2.428 CPU sec, 2.708 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306592, 4, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (117, 148, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 513) [M::mem_pestat] mean and std.dev: (143.79, 47.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 645) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 253, 369) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 777) [M::mem_pestat] mean and std.dev: (277.76, 143.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 981) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (115, 183, 298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (182.06, 92.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728800 sequences (100000052 bp) in 1.647 CPU sec, 1.658 real sec... [M::mem_process_seqs] Processed 727576 reads in 164.636 CPU sec, 5.385 real sec sorting block 48, #reads = 1103886 mem = 536880089 peak = 1161302016 [M::mem_process_seqs] Processed 728070 reads in 93.038 CPU sec, 3.044 real sec sorting block 49, #reads = 1104082 mem = 536878407 peak = 1161302016 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 307307, 3, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 192, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 593) [M::mem_pestat] mean and std.dev: (217.50, 77.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 736) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 248, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 768) [M::mem_pestat] mean and std.dev: (273.80, 141.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 970) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 190, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 460) [M::mem_pestat] mean and std.dev: (207.33, 75.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 558) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726162 sequences (100000153 bp) in 2.115 CPU sec, 2.340 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 307362, 3, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 208, 240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (48, 368) [M::mem_pestat] mean and std.dev: (195.31, 35.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 432) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 248, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (272.96, 140.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 959) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (190.33, 71.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 624) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725098 sequences (100000094 bp) in 1.644 CPU sec, 1.674 real sec... [M::mem_process_seqs] Processed 729114 reads in 165.673 CPU sec, 5.421 real sec [M::mem_process_seqs] Processed 728800 reads in 94.911 CPU sec, 3.114 real sec sorting block 50, #reads = 1103988 mem = 536878442 peak = 1161302016 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 306315, 2, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 228, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 486) [M::mem_pestat] mean and std.dev: (221.62, 70.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 594) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (283.23, 144.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 210, 966) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2598) [M::mem_pestat] mean and std.dev: (258.64, 234.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3414) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725150 sequences (100000096 bp) in 2.264 CPU sec, 2.527 real sec... [M::process] read 724402 sequences (100000287 bp) in 1.638 CPU sec, 1.662 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305271, 2, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 203, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 489) [M::mem_pestat] mean and std.dev: (227.53, 73.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 589) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (288.10, 147.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (131, 236, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (208.92, 92.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1067) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726162 reads in 163.822 CPU sec, 5.307 real sec [M::mem_process_seqs] Processed 725098 reads in 93.231 CPU sec, 2.994 real sec sorting block 51, #reads = 1103848 mem = 536877885 peak = 1162174464 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (8, 305409, 5, 22) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 810) [M::mem_pestat] mean and std.dev: (288.38, 147.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1023) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (132, 199, 295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 621) [M::mem_pestat] mean and std.dev: (200.05, 81.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 784) [M::mem_pestat] skip orientation RR [M::process] read 724516 sequences (100000216 bp) in 2.082 CPU sec, 2.509 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 304516, 7, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (124, 152, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 496) [M::mem_pestat] mean and std.dev: (174.39, 63.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 620) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 265, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 811) [M::mem_pestat] mean and std.dev: (289.67, 147.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1024) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 176, 228) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (33, 358) [M::mem_pestat] mean and std.dev: (173.93, 45.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 423) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724640 sequences (100000048 bp) in 1.652 CPU sec, 1.688 real sec... [M::mem_process_seqs] Processed 725150 reads in 163.571 CPU sec, 5.267 real sec sorting block 52, #reads = 1102306 mem = 536882096 peak = 1162174464 [M::mem_process_seqs] Processed 724402 reads in 93.069 CPU sec, 2.951 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 304886, 7, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 223, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (247.17, 120.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1052) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (290.94, 149.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 248, 275) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (207.92, 72.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 641) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 53, #reads = 1101584 mem = 536879590 peak = 1171861504 [M::process] read 724086 sequences (100000092 bp) in 2.434 CPU sec, 2.706 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 305450, 0, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 171, 206) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (83, 288) [M::mem_pestat] mean and std.dev: (168.75, 45.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 351) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (291.67, 149.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (152, 225, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 992) [M::mem_pestat] mean and std.dev: (221.41, 98.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1272) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724336 sequences (100000114 bp) in 1.676 CPU sec, 1.682 real sec... [M::mem_process_seqs] Processed 724516 reads in 163.648 CPU sec, 5.320 real sec [M::mem_process_seqs] Processed 724640 reads in 94.081 CPU sec, 3.033 real sec sorting block 54, #reads = 1101624 mem = 536879314 peak = 1171861504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304327, 11, 21) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 240, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 513) [M::mem_pestat] mean and std.dev: (232.26, 60.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 618) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 827) [M::mem_pestat] mean and std.dev: (293.40, 150.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1045) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (38, 67, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 680) [M::mem_pestat] mean and std.dev: (129.27, 129.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 894) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 240, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 690) [M::mem_pestat] mean and std.dev: (254.25, 103.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 860) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724280 sequences (100000000 bp) in 2.096 CPU sec, 2.377 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 304421, 6, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (110, 171, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 569) [M::mem_pestat] mean and std.dev: (178.67, 77.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 722) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 270, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (294.80, 151.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1057) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 215, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 722) [M::mem_pestat] mean and std.dev: (210.77, 89.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 910) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728768 sequences (100000139 bp) in 1.697 CPU sec, 1.711 real sec... [M::mem_process_seqs] Processed 724086 reads in 163.164 CPU sec, 5.289 real sec [M::mem_process_seqs] Processed 724336 reads in 92.565 CPU sec, 2.976 real sec sorting block 55, #reads = 1101381 mem = 536879225 peak = 1171861504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 304668, 9, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 195, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (38, 338) [M::mem_pestat] mean and std.dev: (178.00, 39.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 398) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 270, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 845) [M::mem_pestat] mean and std.dev: (296.10, 153.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1069) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 728376 sequences (100000044 bp) in 2.257 CPU sec, 2.450 real sec... [M::process] read 727674 sequences (100000067 bp) in 1.539 CPU sec, 1.548 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 307249, 10, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 191, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 637) [M::mem_pestat] mean and std.dev: (193.36, 68.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 795) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 251, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (279.84, 147.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (37, 76, 89) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 193) [M::mem_pestat] mean and std.dev: (56.00, 27.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 245) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (165, 206, 274) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 492) [M::mem_pestat] mean and std.dev: (212.79, 88.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 601) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724280 reads in 163.266 CPU sec, 5.271 real sec sorting block 56, #reads = 1101070 mem = 536880916 peak = 1171861504 [M::mem_process_seqs] Processed 728768 reads in 93.269 CPU sec, 2.969 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306783, 10, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 188, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (6, 386) [M::mem_pestat] mean and std.dev: (191.56, 60.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 462) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (279.26, 145.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (41, 136, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1457) [M::mem_pestat] mean and std.dev: (237.40, 251.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1929) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 264, 758) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1850) [M::mem_pestat] mean and std.dev: (337.14, 234.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2396) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 57, #reads = 1102866 mem = 536879019 peak = 1189359616 [M::process] read 727614 sequences (100000092 bp) in 2.073 CPU sec, 2.421 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 306719, 2, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 153, 200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 350) [M::mem_pestat] mean and std.dev: (164.10, 47.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 425) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (279.50, 144.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 993) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 280, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 566) [M::mem_pestat] mean and std.dev: (250.50, 86.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 682) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727284 sequences (100000038 bp) in 1.638 CPU sec, 1.640 real sec... [M::mem_process_seqs] Processed 728376 reads in 163.779 CPU sec, 5.305 real sec [M::mem_process_seqs] Processed 727674 reads in 93.471 CPU sec, 3.037 real sec sorting block 58, #reads = 1104879 mem = 536878678 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306285, 2, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 176, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (213.73, 86.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 790) [M::mem_pestat] mean and std.dev: (281.00, 145.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 998) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 213, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 586) [M::mem_pestat] mean and std.dev: (235.62, 111.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 726) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727644 sequences (100000137 bp) in 2.382 CPU sec, 2.838 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 306579, 1, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 235, 271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (216.62, 89.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 658) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (282.53, 146.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 213, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (27, 417) [M::mem_pestat] mean and std.dev: (186.44, 59.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 495) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727614 reads in 162.192 CPU sec, 5.290 real sec [M::mem_process_seqs] Processed 727284 reads in 93.776 CPU sec, 3.039 real sec [M::process] read 728796 sequences (100000239 bp) in 1.749 CPU sec, 1.856 real sec... sorting block 59, #reads = 1104271 mem = 536875359 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306301, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 238, 276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 566) [M::mem_pestat] mean and std.dev: (205.44, 72.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 711) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 254, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 786) [M::mem_pestat] mean and std.dev: (279.77, 144.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 993) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (119, 222, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (196.07, 80.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 847) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728692 sequences (100000070 bp) in 2.056 CPU sec, 2.297 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306996, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 225, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (260.50, 152.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 249, 366) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (275.30, 142.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 975) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (118, 169, 240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 484) [M::mem_pestat] mean and std.dev: (172.92, 66.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 606) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 726306 sequences (100000170 bp) in 1.619 CPU sec, 1.627 real sec... [M::mem_process_seqs] Processed 727644 reads in 163.159 CPU sec, 5.272 real sec [M::mem_process_seqs] Processed 728796 reads in 92.640 CPU sec, 2.948 real sec sorting block 60, #reads = 1103799 mem = 536879961 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 307512, 4, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 275, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 618) [M::mem_pestat] mean and std.dev: (242.65, 69.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 759) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 250, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 769) [M::mem_pestat] mean and std.dev: (275.10, 141.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 971) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 193, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 486) [M::mem_pestat] mean and std.dev: (187.93, 45.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 589) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 61, #reads = 1104799 mem = 536879283 peak = 1189359616 [M::process] read 725420 sequences (100000036 bp) in 2.376 CPU sec, 2.667 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305858, 7, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 235, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 713) [M::mem_pestat] mean and std.dev: (222.94, 106.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 900) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (284.59, 146.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 185, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 454) [M::mem_pestat] mean and std.dev: (198.87, 62.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 547) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725366 sequences (100000137 bp) in 1.659 CPU sec, 1.675 real sec... [M::mem_process_seqs] Processed 728692 reads in 164.664 CPU sec, 5.348 real sec [M::mem_process_seqs] Processed 726306 reads in 94.166 CPU sec, 3.041 real sec sorting block 62, #reads = 1105057 mem = 536878470 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305481, 4, 23) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 217, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 651) [M::mem_pestat] mean and std.dev: (203.57, 73.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (287.74, 147.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (133, 196, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (199.20, 91.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 969) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724734 sequences (100000068 bp) in 2.209 CPU sec, 2.336 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (23, 305860, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 202, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 605) [M::mem_pestat] mean and std.dev: (205.70, 85.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 753) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (287.85, 147.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 215, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (197.27, 62.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 618) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724962 sequences (100000113 bp) in 1.660 CPU sec, 1.659 real sec... [M::mem_process_seqs] Processed 725420 reads in 155.966 CPU sec, 4.976 real sec [M::mem_process_seqs] Processed 725366 reads in 87.931 CPU sec, 2.782 real sec sorting block 63, #reads = 1102501 mem = 536876889 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304601, 5, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 257, 640) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1564) [M::mem_pestat] mean and std.dev: (368.95, 311.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2026) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (289.62, 147.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1028) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 322, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 938) [M::mem_pestat] mean and std.dev: (309.71, 161.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724596 sequences (100000063 bp) in 2.545 CPU sec, 2.694 real sec... [M::process] read 724488 sequences (100000084 bp) in 1.622 CPU sec, 1.629 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (26, 305680, 6, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (125, 191, 285) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 605) [M::mem_pestat] mean and std.dev: (216.25, 126.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 765) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 266, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (290.24, 148.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1035) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 195, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 550) [M::mem_pestat] mean and std.dev: (206.57, 85.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 678) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724734 reads in 160.490 CPU sec, 5.141 real sec [M::mem_process_seqs] Processed 724962 reads in 92.351 CPU sec, 2.957 real sec sorting block 64, #reads = 1102630 mem = 536880333 peak = 1189359616 sorting block 65, #reads = 1101591 mem = 536878445 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304699, 4, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (114, 122, 223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 441) [M::mem_pestat] mean and std.dev: (174.59, 104.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 592) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 268, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 829) [M::mem_pestat] mean and std.dev: (292.77, 150.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1048) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (112, 191, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 772) [M::mem_pestat] mean and std.dev: (207.00, 107.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724360 sequences (100000193 bp) in 1.875 CPU sec, 2.001 real sec... [M::process] read 725068 sequences (100000136 bp) in 1.703 CPU sec, 1.712 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 304720, 3, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 212, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 550) [M::mem_pestat] mean and std.dev: (223.22, 118.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 699) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 832) [M::mem_pestat] mean and std.dev: (293.10, 151.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1052) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 285, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 783) [M::mem_pestat] mean and std.dev: (261.94, 91.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 968) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724596 reads in 163.205 CPU sec, 5.225 real sec [M::mem_process_seqs] Processed 724488 reads in 92.971 CPU sec, 2.952 real sec sorting block 66, #reads = 1101828 mem = 536880628 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304707, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 235, 957) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2485) [M::mem_pestat] mean and std.dev: (393.07, 427.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3249) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 270, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 839) [M::mem_pestat] mean and std.dev: (295.10, 152.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1061) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 180, 211) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (4, 349) [M::mem_pestat] mean and std.dev: (183.83, 52.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 418) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 729040 sequences (100000049 bp) in 2.447 CPU sec, 2.591 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305284, 2, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 209, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (224.19, 74.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 817) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 266, 395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 843) [M::mem_pestat] mean and std.dev: (294.21, 154.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1067) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 242, 275) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (86, 401) [M::mem_pestat] mean and std.dev: (214.17, 47.93) [M::mem_pestat] low and high boundaries for proper pairs: (22, 464) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728188 sequences (100000069 bp) in 1.681 CPU sec, 1.691 real sec... [M::mem_process_seqs] Processed 724360 reads in 159.567 CPU sec, 5.086 real sec [M::mem_process_seqs] Processed 725068 reads in 91.120 CPU sec, 2.885 real sec sorting block 67, #reads = 1101535 mem = 536879392 peak = 1189359616 [M::process] read 727400 sequences (100000109 bp) in 2.160 CPU sec, 2.288 real sec... [M::process] read 727288 sequences (100000033 bp) in 1.668 CPU sec, 1.676 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 306383, 0, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 218, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1044) [M::mem_pestat] mean and std.dev: (235.67, 117.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1340) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 793) [M::mem_pestat] mean and std.dev: (281.68, 146.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1002) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (133, 252, 417) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 985) [M::mem_pestat] mean and std.dev: (199.60, 97.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1269) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727400 reads in 82.266 CPU sec, 2.706 real sec sorting block 68, #reads = 1101685 mem = 536880776 peak = 1189359616 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 307629, 1, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 188, 234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (30, 370) [M::mem_pestat] mean and std.dev: (199.62, 66.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 788) [M::mem_pestat] mean and std.dev: (279.52, 145.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 996) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 186, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 497) [M::mem_pestat] mean and std.dev: (189.93, 63.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 617) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728188 reads in 167.278 CPU sec, 6.247 real sec sorting block 69, #reads = 1104895 mem = 536877724 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (9, 306826, 8, 16) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 250, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (277.74, 146.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 998) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (137, 175, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 698) [M::mem_pestat] mean and std.dev: (186.79, 75.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] skip orientation RR [M::process] read 726868 sequences (100000162 bp) in 2.306 CPU sec, 2.477 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306333, 8, 29) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 147, 238) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 452) [M::mem_pestat] mean and std.dev: (181.80, 89.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 559) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 258, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 799) [M::mem_pestat] mean and std.dev: (283.04, 146.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1010) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 244, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (242.15, 123.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 995) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 729040 reads in 328.326 CPU sec, 11.399 real sec [M::mem_process_seqs] Processed 727288 reads in 101.640 CPU sec, 3.285 real sec [M::process] read 726620 sequences (100000126 bp) in 2.389 CPU sec, 2.549 real sec... sorting block 70, #reads = 1104662 mem = 536879968 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 306300, 4, 12) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 175, 218) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 392) [M::mem_pestat] mean and std.dev: (171.00, 50.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 479) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 258, 377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (283.54, 146.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1007) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 203, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1311) [M::mem_pestat] mean and std.dev: (210.00, 120.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1694) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727954 sequences (100000268 bp) in 2.261 CPU sec, 2.415 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306137, 7, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (115, 149, 207) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 391) [M::mem_pestat] mean and std.dev: (160.42, 56.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 483) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (284.66, 147.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 243, 256) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 482) [M::mem_pestat] mean and std.dev: (204.62, 68.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 595) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726868 reads in 163.159 CPU sec, 5.217 real sec [M::mem_process_seqs] Processed 726620 reads in 93.195 CPU sec, 2.948 real sec [M::process] read 727044 sequences (100000038 bp) in 1.836 CPU sec, 1.893 real sec... sorting block 71, #reads = 1103730 mem = 536879635 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306743, 2, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 218, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 458) [M::mem_pestat] mean and std.dev: (187.33, 55.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 558) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 255, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (280.13, 145.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 202, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 536) [M::mem_pestat] mean and std.dev: (209.29, 78.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 662) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725828 sequences (100000109 bp) in 2.053 CPU sec, 2.212 real sec... [M::process] read 724976 sequences (100000040 bp) in 1.310 CPU sec, 1.313 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305938, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (131, 173, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 485) [M::mem_pestat] mean and std.dev: (182.55, 66.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 603) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 256, 372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 784) [M::mem_pestat] mean and std.dev: (280.17, 144.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 990) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (110, 186, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 563) [M::mem_pestat] mean and std.dev: (191.00, 95.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 714) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727954 reads in 157.808 CPU sec, 5.042 real sec [M::mem_process_seqs] Processed 727044 reads in 89.110 CPU sec, 2.827 real sec sorting block 72, #reads = 1103395 mem = 536878688 peak = 1197187072 sorting block 73, #reads = 1103961 mem = 536876696 peak = 1197187072 [M::process] read 725326 sequences (100000123 bp) in 2.200 CPU sec, 2.352 real sec... [M::process] read 724838 sequences (100000071 bp) in 1.332 CPU sec, 1.335 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 304951, 3, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 171, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 535) [M::mem_pestat] mean and std.dev: (184.29, 69.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 669) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 265, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 816) [M::mem_pestat] mean and std.dev: (289.41, 148.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1031) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 203, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 547) [M::mem_pestat] mean and std.dev: (212.80, 58.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 664) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724976 reads in 86.362 CPU sec, 2.738 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305961, 6, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 204, 288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 550) [M::mem_pestat] mean and std.dev: (201.53, 66.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 681) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 262, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (286.63, 147.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (134, 227, 272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 548) [M::mem_pestat] mean and std.dev: (211.06, 67.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 686) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724588 sequences (100000010 bp) in 1.587 CPU sec, 1.593 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305373, 2, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 203, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 484) [M::mem_pestat] mean and std.dev: (195.44, 52.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 594) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 265, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 812) [M::mem_pestat] mean and std.dev: (288.58, 148.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1026) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 290, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 559) [M::mem_pestat] mean and std.dev: (248.33, 82.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 676) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725828 reads in 239.437 CPU sec, 7.636 real sec [M::mem_process_seqs] Processed 725326 reads in 98.639 CPU sec, 3.166 real sec sorting block 74, #reads = 1100678 mem = 536878112 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (16, 305285, 4, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 147, 184) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (49, 274) [M::mem_pestat] mean and std.dev: (153.13, 26.52) [M::mem_pestat] low and high boundaries for proper pairs: (4, 319) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 814) [M::mem_pestat] mean and std.dev: (289.93, 148.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1028) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (145, 182, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (199.22, 95.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 909) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR sorting block 75, #reads = 1102321 mem = 536877633 peak = 1197187072 [M::process] read 724616 sequences (100000083 bp) in 2.180 CPU sec, 2.331 real sec... [M::process] read 724518 sequences (100000070 bp) in 1.380 CPU sec, 1.380 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 305487, 2, 19) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 200, 298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 572) [M::mem_pestat] mean and std.dev: (220.19, 81.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 709) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 390) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 824) [M::mem_pestat] mean and std.dev: (292.35, 150.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 184, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (6, 401) [M::mem_pestat] mean and std.dev: (200.68, 61.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 480) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724838 reads in 152.525 CPU sec, 4.875 real sec [M::mem_process_seqs] Processed 724588 reads in 89.928 CPU sec, 2.856 real sec sorting block 76, #reads = 1100981 mem = 536881230 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 304857, 2, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 246, 304) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 594) [M::mem_pestat] mean and std.dev: (232.40, 98.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 739) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 830) [M::mem_pestat] mean and std.dev: (293.28, 151.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1049) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 210, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (17, 397) [M::mem_pestat] mean and std.dev: (208.47, 69.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 486) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724508 sequences (100000077 bp) in 2.120 CPU sec, 2.241 real sec... [M::process] read 725266 sequences (100000115 bp) in 1.760 CPU sec, 1.760 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 304799, 3, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 172, 235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 413) [M::mem_pestat] mean and std.dev: (194.73, 84.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 531) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (294.07, 152.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1053) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 224, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 460) [M::mem_pestat] mean and std.dev: (209.06, 83.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 558) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724616 reads in 156.187 CPU sec, 4.973 real sec [M::mem_process_seqs] Processed 724518 reads in 89.827 CPU sec, 2.851 real sec sorting block 77, #reads = 1101668 mem = 536878640 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 305508, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 162, 184) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (61, 266) [M::mem_pestat] mean and std.dev: (151.22, 31.67) [M::mem_pestat] low and high boundaries for proper pairs: (20, 307) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 269, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 844) [M::mem_pestat] mean and std.dev: (295.28, 153.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1068) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (150, 165, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (190.92, 59.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 729830 sequences (100000067 bp) in 2.199 CPU sec, 2.310 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 305731, 7, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 185, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 490) [M::mem_pestat] mean and std.dev: (190.79, 68.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 606) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 265, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 848) [M::mem_pestat] mean and std.dev: (294.29, 155.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1074) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (143, 161, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 533) [M::mem_pestat] mean and std.dev: (162.77, 62.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 663) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 728390 sequences (100000093 bp) in 1.710 CPU sec, 1.711 real sec... [M::mem_process_seqs] Processed 724508 reads in 152.416 CPU sec, 4.851 real sec [M::mem_process_seqs] Processed 725266 reads in 88.475 CPU sec, 2.806 real sec sorting block 78, #reads = 1101326 mem = 536878576 peak = 1197187072 sorting block 79, #reads = 1101595 mem = 536877617 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 307866, 8, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (127, 180, 243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 475) [M::mem_pestat] mean and std.dev: (183.75, 69.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 591) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 247, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 782) [M::mem_pestat] mean and std.dev: (275.84, 145.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 989) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 237, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 499) [M::mem_pestat] mean and std.dev: (213.73, 56.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727636 sequences (100000146 bp) in 1.878 CPU sec, 2.000 real sec... [M::process] read 727132 sequences (100000053 bp) in 1.660 CPU sec, 1.659 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (19, 306869, 8, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 173, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 496) [M::mem_pestat] mean and std.dev: (198.11, 77.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 613) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 253, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 785) [M::mem_pestat] mean and std.dev: (278.35, 144.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 992) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 179, 269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 515) [M::mem_pestat] mean and std.dev: (196.47, 67.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 638) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 729830 reads in 143.706 CPU sec, 4.574 real sec [M::mem_process_seqs] Processed 728390 reads in 77.271 CPU sec, 2.458 real sec sorting block 80, #reads = 1105273 mem = 536878565 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (15, 306850, 8, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 160, 222) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 376) [M::mem_pestat] mean and std.dev: (161.23, 43.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 453) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 255, 374) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (280.74, 145.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1001) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 197, 242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (32, 382) [M::mem_pestat] mean and std.dev: (197.18, 48.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 452) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 727120 sequences (100000081 bp) in 1.799 CPU sec, 1.887 real sec... [M::process] read 726304 sequences (100000184 bp) in 1.300 CPU sec, 1.301 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (21, 306862, 3, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 220, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (207.67, 85.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 256, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (282.03, 146.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 199, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (243.25, 112.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 882) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727636 reads in 133.162 CPU sec, 4.258 real sec [M::mem_process_seqs] Processed 727132 reads in 76.860 CPU sec, 2.457 real sec sorting block 81, #reads = 1104672 mem = 536876485 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 306867, 1, 9) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 221, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 543) [M::mem_pestat] mean and std.dev: (208.17, 75.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 673) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 257, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (282.16, 145.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_pestat] skip orientation FF [M::process] read 726324 sequences (100000201 bp) in 1.978 CPU sec, 2.096 real sec... [M::process] read 726282 sequences (100000143 bp) in 1.500 CPU sec, 1.497 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (22, 306079, 7, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 206, 280) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 538) [M::mem_pestat] mean and std.dev: (209.40, 69.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 667) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (285.36, 147.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 186, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (257.10, 128.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727120 reads in 147.079 CPU sec, 4.689 real sec [M::mem_process_seqs] Processed 726304 reads in 84.753 CPU sec, 2.696 real sec sorting block 82, #reads = 1104110 mem = 536878721 peak = 1197187072 sorting block 83, #reads = 1103842 mem = 536880630 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 306459, 5, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (246, 287, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 789) [M::mem_pestat] mean and std.dev: (280.90, 93.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 970) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 258, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (283.47, 145.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 244, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1126) [M::mem_pestat] mean and std.dev: (298.38, 154.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1443) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725530 sequences (100000000 bp) in 2.218 CPU sec, 2.327 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (18, 306369, 1, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 240, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 634) [M::mem_pestat] mean and std.dev: (236.50, 100.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 794) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 259, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 792) [M::mem_pestat] mean and std.dev: (283.24, 145.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1000) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 262, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (213.33, 76.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725074 sequences (100000233 bp) in 1.780 CPU sec, 1.784 real sec... [M::mem_process_seqs] Processed 726324 reads in 151.326 CPU sec, 4.812 real sec [M::mem_process_seqs] Processed 726282 reads in 87.388 CPU sec, 2.775 real sec sorting block 84, #reads = 1103002 mem = 536879306 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (17, 305495, 3, 16) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 265, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 694) [M::mem_pestat] mean and std.dev: (236.00, 102.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 874) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (287.12, 147.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 230, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (216.21, 76.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725732 sequences (100000218 bp) in 2.220 CPU sec, 2.346 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (11, 305668, 3, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 179, 282) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 540) [M::mem_pestat] mean and std.dev: (205.09, 76.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 669) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 264, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 807) [M::mem_pestat] mean and std.dev: (288.25, 147.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1019) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (121, 178, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (177.55, 65.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 725108 sequences (100000246 bp) in 1.710 CPU sec, 1.703 real sec... [M::mem_process_seqs] Processed 725530 reads in 147.782 CPU sec, 4.698 real sec [M::mem_process_seqs] Processed 725074 reads in 84.823 CPU sec, 2.684 real sec sorting block 85, #reads = 1102450 mem = 536876052 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (20, 306085, 6, 18) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 219, 282) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 534) [M::mem_pestat] mean and std.dev: (219.80, 68.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 660) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (170, 263, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 806) [M::mem_pestat] mean and std.dev: (287.22, 147.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1018) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (122, 203, 225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 431) [M::mem_pestat] mean and std.dev: (180.53, 68.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 534) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724978 sequences (100000017 bp) in 2.206 CPU sec, 2.309 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305099, 5, 14) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 219, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 599) [M::mem_pestat] mean and std.dev: (225.62, 71.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 744) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (171, 265, 385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 813) [M::mem_pestat] mean and std.dev: (289.14, 148.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (142, 209, 223) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 385) [M::mem_pestat] mean and std.dev: (164.25, 50.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 466) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724580 sequences (100000210 bp) in 1.580 CPU sec, 1.584 real sec... [M::mem_process_seqs] Processed 725732 reads in 146.779 CPU sec, 4.673 real sec [M::mem_process_seqs] Processed 725108 reads in 85.748 CPU sec, 2.718 real sec sorting block 86, #reads = 1102712 mem = 536879928 peak = 1197187072 sorting block 87, #reads = 1100610 mem = 536880270 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (10, 305936, 2, 17) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (103, 156, 167) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 295) [M::mem_pestat] mean and std.dev: (132.67, 32.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 359) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 266, 388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (291.41, 150.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 183, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (185.47, 75.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 723918 sequences (100000056 bp) in 1.674 CPU sec, 1.795 real sec... [M::process] read 724260 sequences (100000260 bp) in 1.310 CPU sec, 1.306 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 305412, 5, 24) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (129, 194, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 546) [M::mem_pestat] mean and std.dev: (194.24, 75.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 685) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (172, 267, 389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 823) [M::mem_pestat] mean and std.dev: (292.11, 150.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1040) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (129, 169, 199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 339) [M::mem_pestat] mean and std.dev: (160.59, 54.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 409) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724978 reads in 140.957 CPU sec, 4.515 real sec [M::mem_process_seqs] Processed 724580 reads in 80.893 CPU sec, 2.587 real sec sorting block 88, #reads = 1101781 mem = 536879959 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (14, 305008, 3, 15) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (129, 232, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 540) [M::mem_pestat] mean and std.dev: (190.50, 69.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 677) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 268, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (294.35, 152.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1053) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 189, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (228.85, 110.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1249) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 724430 sequences (100000011 bp) in 1.937 CPU sec, 2.044 real sec... [M::process] read 17624 sequences (2428098 bp) in 0.280 CPU sec, 0.288 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (13, 305033, 2, 20) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 130, 167) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (50, 245) [M::mem_pestat] mean and std.dev: (142.92, 31.80) [M::mem_pestat] low and high boundaries for proper pairs: (11, 284) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 269, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 836) [M::mem_pestat] mean and std.dev: (294.88, 153.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1057) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 188, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (216.12, 127.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 822) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723918 reads in 146.060 CPU sec, 4.706 real sec [M::mem_process_seqs] Processed 724260 reads in 83.983 CPU sec, 2.724 real sec sorting block 89, #reads = 1101378 mem = 536878945 peak = 1197187072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (0, 7449, 0, 0) [M::mem_pestat] skip orientation FF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (169, 266, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 844) [M::mem_pestat] mean and std.dev: (293.89, 155.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1069) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] skip orientation RR as there are not enough pairs [M::mem_process_seqs] Processed 17624 reads in 1.837 CPU sec, 0.060 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (12, 305266, 9, 10) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 153, 224) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 390) [M::mem_pestat] mean and std.dev: (171.08, 47.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 473) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (173, 267, 396) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 842) [M::mem_pestat] mean and std.dev: (295.48, 154.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1065) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (122, 202, 242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 482) [M::mem_pestat] mean and std.dev: (208.70, 106.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 635) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724430 reads in 70.203 CPU sec, 2.356 real sec sorting block 90, #reads = 1100281 mem = 536879897 peak = 1239457792 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 100155290 overall: 69810331648 mem 12841.600 user 455.156 sys 452.122 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:20260529_LH00995_0049_B23YT2HLT4.SH032_HG514.L005\tPU:L005\tSM:SH032_HG514\tLB:SH032_HG514\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 0004.SH032_HG514_R1.fastq.gz 0004.SH032_HG514_R2.fastq.gz [main] Real time: 452.161 sec; CPU: 13296.760 sec sorting block 91, #reads = 414122 mem = 201959799 peak = 1239457792 uniq header count 1 merging 92 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 128 algo: util-sort license: sentieon:util=1 output file size: 4444882982 output reads: 100738287 bam_mem_sort: 92 calls 54.202 user 0.829 sys 56.371 real bam_write: 92 calls 44.722 user 2.624 sys 86.604 real execute: 1 calls 17.954 user 0.568 sys 473.030 real merge_files: 1 calls 17.925 user 0.548 sys 20.561 real parse_chunk: 1463 calls 63.727 user 16.252 sys 93.595 real read_chunk: 3960 calls 27.427 user 18.509 sys 380.664 real sort_block: 1 calls 21.073 user 18.107 sys 371.944 real write_chunk: 2495 calls 17.607 user 0.371 sys 19.863 real overall: 2698981376 mem 897.710 user 50.633 sys 473.050 real ls: cannot access '*.cram': No such file or directory