sample_id,mosdepth_mean_coverage,mosdepth_mean_coverage_target,samtools_raw_total_sequences,samtools_reads_mapped,samtools_reads_unmapped,samtools_reads_properly_paired,samtools_reads_duplicated,samtools_reads_mq0,samtools_bases_mapped_cigar,samtools_mismatches,samtools_error_rate,samtools_average_length,samtools_average_quality,samtools_insert_size_average,samtools_insert_size_std_dev,samtools_properly_paired_percent,samtools_duplication_rate,samtools_mapping_rate,sentieon_insert_size,sentieon_prenatal_exome_v1_targets_mean_target_coverage,sentieon_prenatal_exome_v1_targets_pct_selected_bases,sentieon_prenatal_exome_v1_targets_zero_cvg_targets_pct,sentieon_prenatal_exome_v1_targets_pct_target_bases_10x,sentieon_prenatal_exome_v1_targets_pct_target_bases_20x,sentieon_prenatal_exome_v1_targets_pct_target_bases_30x,sentieon_prenatal_exome_v1_targets_at_dropout,sentieon_prenatal_exome_v1_targets_gc_dropout
Filler-D0000335,12.76,471.48,2274315314,2274250107,65207,2200865214,1902149206,102185946,338328836286,1247700275,0.003687833,148.0,39.5,232.7,118.2,96.8,0.8363612531169018,0.9999713289535542,,476.425,0.870337,0.00641433,0.988208,0.986339,0.984823,7.98106,1.02427e-06
Filler-D0000539,12.52,447.61,2650222464,2650131773,90691,2577234564,2292698289,110334720,394100804160,1468288002,0.003725666,148.0,39.5,242.0,123.5,97.2,0.8650965419482611,0.9999657798538681,,450.611,0.868855,0.00629994,0.988517,0.986796,0.9854,6.49097,0.0018564
Filler-D0000637,11.5,400.16,2054423056,2054359329,63727,1996725434,1737110118,89631553,305840361108,1178064716,0.003851895,148.0,39.5,263.4,138.7,97.2,0.8455464481508428,0.9999689805856619,,397.763,0.867629,0.0069651,0.987782,0.98618,0.984855,7.63691,0.00242733
Filler-D0000789,14.23,525.89,2154829846,2154764994,64852,2098063810,1751097044,94930378,320877380922,1143350401,0.0035632,148.0,39.5,257.1,135.4,97.4,0.8126381984408434,0.9999699038881792,,523.616,0.868355,0.00708796,0.988276,0.986639,0.985523,8.83036,0.000146218
Filler-D0000861,7.97,300.96,1030978682,1030944931,33751,1006922140,804344985,43375084,153740133411,573465837,0.003730099,148.0,39.5,253.2,130.4,97.7,0.7801761559605167,0.9999672631446321,,299.817,0.869037,0.00738453,0.986957,0.984868,0.982599,8.54652,0.000411437
Filler-D0000890,7.88,252.9,1586343792,1586283113,60679,1537566382,1371175961,66701736,236352034862,916244358,0.003876609,148.0,39.5,262.1,141.5,96.9,0.8643624212575479,0.9999617491490143,,254.119,0.863361,0.00716846,0.986812,0.98481,0.983179,4.73011,0.106682
Filler-D0001009,10.86,340.75,1819420872,1819367210,53662,1760429940,1544077423,74757239,271479236977,1033491971,0.003806891,149.0,39.4,325.6,166.9,96.8,0.8486642352864027,0.9999705059995596,,332.042,0.853853,0.00639315,0.988876,0.987202,0.985762,6.8525,0.0184511
Filler-D0001089,12.66,468.77,2089819592,2089745610,73982,1858443126,1711707356,98793814,311417383933,1192512997,0.003829308,148.0,39.5,217.8,101.3,88.9,0.8190694366884852,0.9999645988580625,,468.152,0.868773,0.00865977,0.985939,0.984349,0.983235,5.69218,0.190302
Filler-D0001104,9.5,318.11,1602435854,1602370488,65366,1562056734,1341953930,61770041,239109910872,932593052,0.003900269,148.0,39.5,266.3,141.6,97.5,0.8374462707198013,0.9999592083515625,,319.569,0.864455,0.00715575,0.987498,0.985727,0.9843,4.67075,0.0534986
Filler-D0001215,10.4,355.74,2255317486,2255246364,71122,2189264246,1966387396,95461495,335287312110,1283027519,0.003826651,148.0,39.5,254.5,135.4,97.1,0.8718893939352005,0.9999684647503327,,356.868,0.864968,0.00713033,0.987379,0.985721,0.984336,5.30919,0.0836006
Filler-D0001322,11.86,407.63,2028626926,2028561891,65035,1972003164,1706065443,85528408,302409146010,1067184476,0.003528942,149.0,39.4,283.1,150.2,97.2,0.8409951682757069,0.9999679413700141,,401.536,0.862574,0.00694815,0.988098,0.986503,0.985265,6.74996,0.00745315
Filler-D0001361,7.96,294.61,986124500,986094990,29510,958973626,761295395,43177288,146813653099,568670024,0.003873414,148.0,39.5,269.0,145.9,97.2,0.7720073834490473,0.9999700747725059,,296.31,0.864086,0.00609658,0.98834,0.986417,0.984371,8.17952,0.00185597
Filler-D0001515,11.1,358.54,2260675068,2260604798,70270,2187606300,1966718673,94721628,336430185541,1282418361,0.003811841,148.0,39.4,286.6,158.7,96.8,0.8699696390865845,0.9999689163644105,,354.35,0.856721,0.00569409,0.989061,0.986935,0.985269,5.01851,0.0542701
Filler-D0002474,10.8,364.37,2185859312,2185771707,87605,2129881670,1890207972,86940120,325313275679,1109595451,0.003410852,149.0,39.5,276.1,142.9,97.4,0.8647436555605734,0.999959921940301,,361.546,0.865447,0.00686342,0.987746,0.986047,0.984752,5.26286,0.0506882
Filler-D0002530,12.39,465.7,2302179608,2302115806,63802,2218357092,1931971899,104487351,341355040766,1121381872,0.00328509,148.0,39.5,232.6,121.5,96.4,0.8391925166422549,0.9999722862630794,,471.601,0.872902,0.00746926,0.987332,0.985786,0.984552,8.67198,1.15462e-06
Filler-D0002564,9.41,287.81,1741135634,1741067597,68037,1684956942,1499622554,72651859,259675225619,1038250597,0.003998266,148.0,39.4,305.9,166.0,96.8,0.8612899102839222,0.9999609237794739,,282.961,0.853264,0.00674479,0.987959,0.986059,0.984548,5.09453,0.109347
Filler-D0002693,10.73,331.1,2481013808,2480938943,74865,2406147028,2205925237,96709903,369924345530,1373798557,0.003713728,149.0,39.4,303.1,162.9,97.0,0.8891225151133862,0.9999698248354126,,326.65,0.85809,0.00649059,0.988299,0.986656,0.985315,4.73705,0.199777
Filler-D0002805,8.9,268.61,1795242486,1795186404,56082,1742234506,1566073951,74228111,268100857590,1036251614,0.003865156,149.0,39.4,301.8,164.6,97.0,0.8723467516020006,0.9999687607660596,,263.053,0.855658,0.00663887,0.98813,0.986113,0.984559,3.73916,0.385359
Filler-D0002881,10.58,390.7,1651852606,1651774444,78162,1607522834,1338212906,72339706,245144483569,863842380,0.003523809,148.0,39.5,240.2,123.4,97.3,0.8101285194206971,0.9999526822189122,,397.648,0.867267,0.00649906,0.988072,0.986306,0.984898,5.9659,0.0156773
Filler-D0002923,10.72,373.7,1602374868,1602326117,48751,1556844680,1303958140,67130721,239207453994,912872799,0.003816239,149.0,39.5,264.3,142.3,97.2,0.8137659707728266,0.9999695757834365,,373.863,0.862562,0.00696086,0.987795,0.986116,0.984767,6.94261,0.00149929
Filler-D0002999,12.68,465.05,2880860410,2880754734,105676,2692440798,2505400102,135164772,425246956515,1516665650,0.003566553,147.0,39.5,221.5,112.6,93.5,0.8696707738088566,0.9999633179033481,,479.529,0.871495,0.00702441,0.987671,0.986014,0.984513,8.62482,1.11388e-06
Filler-D0003090,12.1,437.69,1907043952,1906968343,75609,1859083960,1559574431,84337809,282897428668,1044997071,0.003693908,148.0,39.5,251.4,136.0,97.5,0.8177967945439362,0.9999603527753408,,446.613,0.869072,0.00707102,0.987907,0.986374,0.985148,10.934,0.0348899
Filler-D0003105,10.01,346.59,1858536558,1858463875,72683,1808756394,1575012287,79207680,276324313629,998312018,0.003612827,148.0,39.5,253.3,133.1,97.3,0.8474475684755403,0.9999608923485055,,349.893,0.867434,0.00715999,0.98722,0.98544,0.984014,8.10629,0.00111929
Filler-D0003157,13.57,493.72,1777947352,1777863812,83540,1728328648,1401154144,77646287,265707421561,1008113527,0.003794074,149.0,39.5,262.1,134.4,97.2,0.7880740351641189,0.9999530132318564,,487.683,0.86599,0.0060415,0.988691,0.986676,0.985355,9.52535,0.00302727
Filler-D0003224,10.96,383.0,1877314350,1877257840,56510,1823595156,1568746710,82061316,278619189700,982474191,0.003526226,148.0,39.5,260.5,140.8,97.1,0.8356334728917403,0.9999698984882314,,387.101,0.869361,0.0062025,0.988037,0.985923,0.984361,10.0537,1.12019e-06
Filler-D0003241,11.2,403.62,1810138046,1810079842,58204,1760846886,1487285758,78071787,268862263457,1012770428,0.003766875,148.0,39.5,248.1,132.8,97.3,0.8216421732511333,0.9999678455462949,,412.276,0.868118,0.00611776,0.988104,0.985988,0.984479,10.1908,0.00210699
Filler-D0003441,10.17,334.46,2437529414,2437454113,75301,2361129534,2159169468,101263728,362337615835,1332691345,0.003678038,148.0,39.5,255.2,135.6,96.9,0.8858024258492087,0.9999691076548379,,334.46,0.866527,0.00725743,0.987194,0.985361,0.983991,6.01472,0.00253228
T13-D0003360,9.76,319.48,2627461958,2627370573,91385,2565070170,2358239231,112794563,389426670916,1326394690,0.003406019,148.0,39.5,260.1,140.6,97.6,0.8975350618568309,0.9999652192871065,,323.215,0.872865,0.00625757,0.987638,0.985471,0.983967,9.40724,8.85054e-07
T18-D0001467,13.07,399.15,1909377204,1909302840,74364,1821891984,1589480151,77116861,286037151181,1185713340,0.004145312,149.0,39.3,366.3,192.3,95.4,0.8324600019682649,0.999961053269179,,381.791,0.835012,0.00542718,0.989402,0.987679,0.986406,4.52901,0.2891
T18-D0003255,12.06,400.97,2767991064,2767912784,78280,2683869670,2444262302,114350119,412230598842,1461695481,0.00354582,149.0,39.4,277.7,150.8,97.0,0.8830455899188553,0.9999717195618808,,395.523,0.867555,0.00668971,0.988188,0.986433,0.985112,9.18884,0.00118552
T21-D0003322,10.78,367.2,2026396374,2026334623,61751,1966230240,1729818243,84044044,301501012958,1114888016,0.003697792,148.0,39.5,264.0,142.7,97.0,0.8536425870055372,0.999969526692412,,370.435,0.868432,0.00613895,0.988302,0.986142,0.984479,9.19276,8.76974e-07
T21-D0003376,11.57,425.8,2165234856,2165166728,68128,2104997596,1826057304,94610822,320844244063,1109561880,0.003458257,148.0,39.5,240.3,127.9,97.2,0.8433529965305528,0.9999685355148374,,437.142,0.873023,0.00728709,0.987586,0.986033,0.984885,9.93141,1.06218e-06