Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/a74ce71ace7b5ecf8326e80b83099d/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/da50992058b0720daf34eab3a308f3/Filler-D0000335.bam
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Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/df045df372aa59d262c15c3d42a545/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/f4ab261597db89e2038fb6c4e311f2/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/0a5537365bb70f64805d8dd9580848/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/5d7a49e68c5e0c3d26d035039d19ca/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/6c3a907da8dac3d6fcb2aff678d40f/Filler-D0000335.bam
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Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/0d930da209038265beaaf97126404f/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/95fdbf05a0870d8b9017d73bf08159/Filler-D0000335.bam
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Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/f4ce085796b5db9070e4796c6bf5d3/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/6b661ff00f9b5f57d39ef8a0731ff3/Filler-D0000335.bam
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/f4ab261597db89e2038fb6c4e311f2/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/ad48f8026bf634d3d9f6595016aabe/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/e8af39c98eae088d8bd79eb7344a37/Filler-D0000335.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/6e9c65bf8378c7297a4d9f7e06e613/Filler-D0000335.bam
==> STAGING COMPLETE (36 inputs)
ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory