Error executing process > 'PICARD_COLLECTHSMETRICS (659_91-T1-TDNA-1_A23FG3YLT4_1)'

Caused by:
  K8s Job nf-899613f6d5aba5c5bf6840667561741b-15327 execution failed: Job has reached the specified backoff limit


Command executed:

  picard -Xmx13107M BedToIntervalList --INPUT baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38.bed --OUTPUT baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38.interval_list --SEQUENCE_DICTIONARY Homo_sapiens_assembly38.dict --TMP_DIR .
  picard -Xmx13107M BedToIntervalList --INPUT targets/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_footprint.bed --OUTPUT targets/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_footprint.interval_list --SEQUENCE_DICTIONARY Homo_sapiens_assembly38.dict --TMP_DIR .
  
  picard \
      -Xmx13107M \
      CollectHsMetrics \
       \
      --REFERENCE_SEQUENCE Homo_sapiens_assembly38.fasta \
      --BAIT_INTERVALS baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38.interval_list \
      --TARGET_INTERVALS targets/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_footprint.interval_list \
      --INPUT 659_91-T1-TDNA-1_A23FG3YLT4_1.md.bam \
      --OUTPUT 659_91-T1-TDNA-1_A23FG3YLT4_1_xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_footprint.CollectHsMetrics.coverage_metrics
  
  cat <<-END_VERSIONS > versions.yml
  "PICARD_COLLECTHSMETRICS":
      picard: $(echo $(picard CollectHsMetrics --version 2>&1) | grep -o 'Version:.*' | cut -f2- -d:)
  END_VERSIONS

Command exit status:
  -

Command output:
  (empty)

Work dir:
  s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/9613f6d5aba5c5bf6840667561741b

Container:
  292967571998.dkr.ecr.us-west-2.amazonaws.com/daq/picard_collecthsmetrics:3.3.0

Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`