.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (RGB_RLP_lowDV_1ststrand_42C_3)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/6dae82870aaa96957744b29f83ff5e/.command.err
Size: 542 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (RGB_RLP_lowDV_1ststrand_42C_3)
Attempt

Content

Processing Kallisto file: RGB_RLP_lowDV_1ststrand_42C_3/abundance.h5
Successfully converted RGB_RLP_lowDV_1ststrand_42C_3/abundance.h5 to RGB_RLP_lowDV_1ststrand_42C_3_kallisto_mqc.tsv
  Sample: RGB_RLP_lowDV_1ststrand_42C_3
  Mean Fragment Length: 125.2 bp
  Median Fragment Length: 117.0 bp
  pct_mito_est_counts: 0.012%
  pct_ribo_est_counts: 0.863%
  pct_hk_est_counts: 0.347%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.024%
  pct_ribo_tpm: 2.755%
  pct_hk_tpm: 0.572%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.013%