.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (RGB_RLP_lowDV_1ststrand_25C_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/e41d00a60345f00134b88a9eeadc36/.command.err
Size: 541 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (RGB_RLP_lowDV_1ststrand_25C_1)
Attempt

Content

Processing Kallisto file: RGB_RLP_lowDV_1ststrand_25C_1/abundance.h5
Successfully converted RGB_RLP_lowDV_1ststrand_25C_1/abundance.h5 to RGB_RLP_lowDV_1ststrand_25C_1_kallisto_mqc.tsv
  Sample: RGB_RLP_lowDV_1ststrand_25C_1
  Mean Fragment Length: 126.1 bp
  Median Fragment Length: 117.0 bp
  pct_mito_est_counts: 0.015%
  pct_ribo_est_counts: 0.854%
  pct_hk_est_counts: 0.349%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.031%
  pct_ribo_tpm: 2.739%
  pct_hk_tpm: 0.55%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.007%