File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/e41d00a60345f00134b88a9eeadc36/.command.log
Size
1.0 KB
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (RGB_RLP_lowDV_1ststrand_25C_1)
Attempt

Content

View in new tab 
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/e41d00a60345f00134b88a9eeadc36/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/e41d00a60345f00134b88a9eeadc36/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/7a3da43a14d2dc93fc41834ca97069/RGB_RLP_lowDV_1ststrand_25C_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/59a39d45943eb232f0230d0d4107d0/RGB_RLP_lowDV_1ststrand_25C_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: RGB_RLP_lowDV_1ststrand_25C_1/abundance.h5
Successfully converted RGB_RLP_lowDV_1ststrand_25C_1/abundance.h5 to RGB_RLP_lowDV_1ststrand_25C_1_kallisto_mqc.tsv
  Sample: RGB_RLP_lowDV_1ststrand_25C_1
  Mean Fragment Length: 126.1 bp
  Median Fragment Length: 117.0 bp
  pct_mito_est_counts: 0.015%
  pct_ribo_est_counts: 0.854%
  pct_hk_est_counts: 0.349%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.031%
  pct_ribo_tpm: 2.739%
  pct_hk_tpm: 0.55%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.007%