.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (RGB_RLP_lowDV_1ststrand_40C_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/e16b5d73564328a49fe8daa111711a/.command.log
Size: 937 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (RGB_RLP_lowDV_1ststrand_40C_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/c443b831960b7564fe9a8c12dfed7e/RGB_RLP_lowDV_1ststrand_40C_2.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/1b307d1a9f5c108dab846d0b2a58eb/RGB_RLP_lowDV_1ststrand_40C_2.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/96bed949f14f43d57e4f4706d1fa6a/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/e16b5d73564328a49fe8daa111711a/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/e16b5d73564328a49fe8daa111711a/.command.run
==> STAGING COMPLETE (5 inputs)

processing ref_annot.bed ... Done
[W::hts_idx_load3] The index file is older than the data file: RGB_RLP_lowDV_1ststrand_40C_2.Aligned.sortedByCoord.out.bam.bai
processing RGB_RLP_lowDV_1ststrand_40C_2.Aligned.sortedByCoord.out.bam ... Finished