ARRIBA FILTERING SUMMARY
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Input file: rna_s1221_S42.arriba.fusions.tsv
Filter config: arriba_filter_config.yaml
AIH blacklist breakpoints (staged path): blacklist_breakpoint_database_2026-04-27.tsv
Output TSV (all rows): rna_s1221_S42.arriba.fusions.filtered.tsv
Output TSV (PASS only): rna_s1221_S42.arriba.fusions.filtered_pass_only.tsv

Total fusions: 25
Pass (FILTER=PASS): 13 (52.0%)
Fail (FILTER=FAIL): 12 (48.0%)

AIH curated blacklist:
  Total blacklisted: 2
  All blacklisted rows have FILTER=FAIL

Failure reasons:
  confidence_below_min(medium<high);aih_curated_blacklist: 2
  confidence_below_min(medium<high): 2
  confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
  confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 2
  confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 1
  confidence_below_min(low<high): 1
  confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 1

Breakdown by confidence:
  high: 13 pass, 0 fail (total: 13)
  low: 0 pass, 5 fail (total: 5)
  medium: 0 pass, 7 fail (total: 7)