#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	SpliceType	LeftGene	LeftBreakpoint	RightGene	RightBreakpoint	JunctionReads	SpanningFrags	LargeAnchorSupport	FFPM	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	annots
FGFR3--TACC3	38	1	38.00	1.00	ONLY_REF_SPLICE	FGFR3^ENSG00000068078.20	chr4:1806934:+	TACC3^ENSG00000013810.20	chr4:1739702:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1172:1619:13834,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1239:20019:22518,&rna_s1221_S42@LH00166:156:2373MLLT3:1:2228:45344:9876,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1172:44642:19842,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1175:14185:7537,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1205:37855:29263,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1177:27028:5150,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1219:42108:14010,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1112:29497:22117,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1114:11402:3804,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1127:16016:27341,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1212:44124:19426,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1287:21120:18368,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2146:26334:11959,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2279:36810:6976,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1207:19779:2682,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1296:20029:29455,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2189:3367:11607,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2214:8739:9251,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2101:44133:11591,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2117:32899:4525,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2138:23477:4669,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2236:33112:19025,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2252:17625:29231,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1149:9543:16926,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1152:5974:19361,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1159:18531:3564,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1202:38928:29199,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1271:31975:24360,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2183:24208:2378,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1176:29876:27292,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1218:50337:7120,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2134:13159:6335,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2155:7990:17182,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2164:23357:14074,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2236:27509:5598,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2241:13704:8627,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2267:10385:24825	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2211:8693:12119	YES_LDAS	3.9283	GT	1.8892	AG	1.7819	["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","Klijn_CellLines","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr4:0.05Mb]","LOCAL_REARRANGEMENT:+:[48122]"]
KIF5B--RET	26	1	26.00	1.00	ONLY_REF_SPLICE	KIF5B^ENSG00000170759.11	chr10:32017143:-	RET^ENSG00000165731.20	chr10:43114480:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1123:43911:25081,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1198:5078:13065,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1235:31041:14603,&rna_s1221_S42@LH00166:156:2373MLLT3:1:2263:47526:1737,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1151:25456:6079,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1241:17819:5630,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1242:3903:4076,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1261:2100:19634,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2285:30939:28879,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2288:34009:5230,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1267:9904:24985,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2101:17976:26027,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2269:17097:11783,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2279:4282:19826,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2283:44272:18849,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1291:51132:25258,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2144:30486:10950,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1137:14934:9668,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1190:13159:25979,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2211:30856:24088,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1227:47952:25642,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1258:7112:2298,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2204:21175:1993,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2145:46093:10373,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2211:17662:11863,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2295:19511:20932	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1139:40758:9300	YES_LDAS	2.7196	GT	1.9656	AG	1.9656	["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTRACHROMOSOMAL[chr10:11.02Mb]"]
LMNA--NTRK1	24	0	24.00	0.00	ONLY_REF_SPLICE	LMNA^ENSG00000160789.23	chr1:156130773:+	NTRK1^ENSG00000198400.13	chr1:156874906:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1122:13159:27004,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1166:8434:20675,&rna_s1221_S42@LH00166:156:2373MLLT3:1:2116:43014:11190,&rna_s1221_S42@LH00166:156:2373MLLT3:1:2160:18096:16269,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2219:47943:3099,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1208:11254:7617,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2121:25114:26059,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2141:34628:14827,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2212:6603:28013,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2259:49681:28222,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2278:12484:26283,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1143:26427:18849,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1227:39029:2554,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2145:39492:2458,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2172:36625:11334,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1240:40074:28174,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2138:21656:8018,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1272:42561:11751,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1285:42219:9428,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2252:28923:19073,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2145:49403:2554,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2150:34859:18208,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2170:10819:8306,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2268:40906:25065	.	YES_LDAS	2.4174	GT	1.7465	AG	1.5058	["ChimerKB","ChimerPub","Cosmic","TCGA_StarF2019","INTRACHROMOSOMAL[chr1:0.68Mb]"]
FGFR3--BAIAP2L1	24	0	24.00	0.00	ONLY_REF_SPLICE	FGFR3^ENSG00000068078.20	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	chr7:98362432:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1149:37587:26107,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1225:4356:24921,&rna_s1221_S42@LH00166:156:2373MLLT3:1:2112:51151:9684,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1184:33047:14010,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1210:25659:12616,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2267:41063:20307,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2268:37531:12552,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1222:41332:29680,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1288:25641:9988,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1181:45446:11238,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1209:9146:23703,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1247:47268:15292,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1124:19945:1176,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1228:20925:8482,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2259:17153:27517,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1280:32612:2811,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2230:51049:4957,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2281:28221:21765,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1276:2267:23543,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2257:31226:15885,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1201:21443:28094,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1207:30236:20387,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1236:46999:11911,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2173:31577:28927	.	YES_LDAS	2.4174	GT	1.8892	AG	1.8062	["ChimerKB","Klijn_CellLines","ChimerPub","Cosmic","CCLE_StarF2019","INTERCHROMOSOMAL[chr4--chr7]"]
ETV6--NTRK3	14	0	14.00	0.00	ONLY_REF_SPLICE	ETV6^ENSG00000139083.11	chr12:11869969:+	NTRK3^ENSG00000140538.16	chr15:87940753:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2226:17698:7633,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1229:43680:29520,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1268:25965:21284,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2274:12326:27549,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2101:16469:4925,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1193:25909:4909,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2262:43236:15965,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2288:18022:7938,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2289:32890:6111,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1257:4375:19602,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1158:14869:20259,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1182:47489:3211,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1263:34351:15372,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2109:41147:5422	.	YES_LDAS	1.4102	GT	1.7819	AG	1.9656	["ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr12--chr15]"]
CD74--ROS1	14	1	14.00	1.00	ONLY_REF_SPLICE	CD74^ENSG00000019582.16	chr5:150404680:-	ROS1^ENSG00000047936.11	chr6:117324415:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1242:5956:14298,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1274:39935:16590,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1188:15674:16333,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2163:33824:5102,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1104:22534:14379,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1286:35525:28110,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2146:14102:23415,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2173:24504:10325,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1293:12770:12872,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1123:16644:14106,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2166:2757:24008,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2283:26908:22181,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2290:14102:27228,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1125:3349:24360	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1165:42524:4637	YES_LDAS	1.5109	GT	1.7819	AG	1.7465	["ChimerKB","ChimerSeq","TCGA_StarF2019","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr5--chr6]"]
EGFR--SEPTIN14	13	0	13.00	0.00	ONLY_REF_SPLICE	EGFR^ENSG00000146648.19	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1156:27148:12248,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1251:31438:8370,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1166:5863:7954,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1242:6677:20355,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2184:8628:2170,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1230:40333:8883,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1151:43458:22310,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2224:43393:2202,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2286:7879:28590,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1186:28332:29552,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1251:5484:25722,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2123:24578:7441,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2256:46685:8322	.	YES_LDAS	1.3094	GT	1.8892	AG	1.9899	["INTRACHROMOSOMAL[chr7:0.58Mb]"]
TFG--NTRK1	12	0	12.00	0.00	ONLY_REF_SPLICE	TFG^ENSG00000114354.15	chr3:100732672:+	NTRK1^ENSG00000198400.13	chr1:156874571:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1273:9802:19329,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1204:47721:29343,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1136:30255:10293,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2202:35664:22422,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2249:39482:4044,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2264:36172:11607,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1205:33851:4028,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1218:39260:1705,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1285:20176:2122,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2239:44337:15789,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1155:23644:3644,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2135:15424:27469	.	YES_LDAS	1.2087	GT	1.9329	AG	1.6895	["ChimerKB","ChimerSeq","TCGA_StarF2019","HaasMedCancer","DEEPEST2019","chimerdb_pubmed","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr3--chr1]"]
SLC45A3--BRAF	12	0	12.00	0.00	ONLY_REF_SPLICE	SLC45A3^ENSG00000158715.6	chr1:205680394:-	BRAF^ENSG00000157764.14	chr7:140794467:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1193:28849:22758,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1129:51253:2778,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1166:40703:28142,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2169:37208:4044,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1152:25345:18480,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1284:39094:5486,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2256:34979:8803,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1101:8693:12344,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1191:44817:12552,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1283:51123:12744,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2162:4634:23287,&rna_s1221_S42@LH00166:156:2373MLLT3:8:2170:5152:6592	.	YES_LDAS	1.2087	GT	1.5628	AG	1.7465	["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTERCHROMOSOMAL[chr1--chr7]"]
TPM3--NTRK1	12	1	12.00	1.00	ONLY_REF_SPLICE	TPM3^ENSG00000143549.21	chr1:154170400:-	NTRK1^ENSG00000198400.13	chr1:156874571:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2292:44910:16814,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1107:1740:2506,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2256:27194:19121,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1212:12132:11062,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2113:25826:21749,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1135:39871:24457,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2235:50115:1513,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1248:30319:16558,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2185:4023:2234,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2277:8684:23928,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2298:45964:5054,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1124:49080:9364	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1195:9728:29488	YES_LDAS	1.3094	GT	1.9329	AG	1.6895	["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr1:2.62Mb]"]
PAX8--PPARG	11	0	11.00	0.00	ONLY_REF_SPLICE	PAX8^ENSG00000125618.18	chr2:113235394:-	PPARG^ENSG00000132170.23	chr3:12379704:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1235:18697:19554,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1296:50273:6848,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1291:24328:27132,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1229:19677:28110,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2218:47323:6736,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1281:23671:8947,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2102:15045:18224,&rna_s1221_S42@LH00166:156:2373MLLT3:4:2179:36625:28318,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1130:51234:25947,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1154:42154:19057,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1287:1499:18080	.	YES_LDAS	1.108	GT	1.8295	AG	1.9329	["Mitelman","ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr2--chr3]"]
NCOA4--RET	9	0	9.00	0.00	ONLY_REF_SPLICE	NCOA4^ENSG00000266412.6	chr10:46012883:-	RET^ENSG00000165731.20	chr10:43116584:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1102:17134:27357,&rna_s1221_S42@LH00166:156:2373MLLT3:1:1114:40703:14715,&rna_s1221_S42@LH00166:156:2373MLLT3:2:2244:30708:4381,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1117:38512:11623,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1177:3247:9380,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1256:4763:8803,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2208:3950:25306,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1293:16663:4012,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2130:33722:26812	.	YES_LDAS	0.9065	GT	1.9086	AG	1.8323	["ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:2.87Mb]"]
CCDC6--RET	8	0	8.00	0.00	ONLY_REF_SPLICE	CCDC6^ENSG00000108091.11	chr10:59906122:-	RET^ENSG00000165731.20	chr10:43116584:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1136:51678:13097,&rna_s1221_S42@LH00166:156:2373MLLT3:2:1109:13704:13273,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1242:48960:8899,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2145:11642:19217,&rna_s1221_S42@LH00166:156:2373MLLT3:3:2182:29866:19714,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1187:13898:1945,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2246:10126:25690,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2250:33796:12584	.	YES_LDAS	0.8058	GT	1.8892	AG	1.8323	["Mitelman","ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:16.66Mb]"]
LEPROTL1--SMG1P1	4	0	2.00	0.00	ONLY_REF_SPLICE	LEPROTL1^ENSG00000104660.19	chr8:30104991:+	SMG1P1^ENSG00000237296.9	chr16:22451620:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1260:20777:29151,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2105:48312:13193,&rna_s1221_S42@LH00166:156:2373MLLT3:5:2127:15840:25850,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2117:19631:6464	.	YES_LDAS	0.2015	GC	1.8892	AG	1.9656	["INTERCHROMOSOMAL[chr8--chr16]"]
SLC34A2--ROS1	3	0	3.00	0.00	ONLY_REF_SPLICE	SLC34A2^ENSG00000157765.13	chr4:25664330:+	ROS1^ENSG00000047936.11	chr6:117324415:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1218:12382:4957,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1224:20361:6319,&rna_s1221_S42@LH00166:156:2373MLLT3:8:1168:6575:6976	.	YES_LDAS	0.3022	GT	1.8892	AG	1.7465	["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","Klijn_CellLines","GUO2018CR_TCGA","chimerdb_pubmed","ChimerPub","Cosmic","INTERCHROMOSOMAL[chr4--chr6]"]
EML4--ALK	3	0	3.00	0.00	ONLY_REF_SPLICE	EML4^ENSG00000143924.19	chr2:42295516:+	ALK^ENSG00000171094.18	chr2:29223528:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1212:34526:23399,&rna_s1221_S42@LH00166:156:2373MLLT3:1:2142:30717:8114,&rna_s1221_S42@LH00166:156:2373MLLT3:3:1292:38364:5951	.	YES_LDAS	0.3022	GT	1.6895	AG	1.9086	["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr2:12.25Mb]"]
CCDC32--CBX3	3	0	3.00	0.00	INCL_NON_REF_SPLICE	CCDC32^ENSG00000128891.16	chr15:40562772:-	CBX3^ENSG00000122565.19	chr7:26201769:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2232:22118:23207,&rna_s1221_S42@LH00166:156:2373MLLT3:5:1251:2738:12953,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2225:20371:28126	.	YES_LDAS	0.3022	GT	1.8892	AG	1.3383	["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr15--chr7]"]
WASH5P--WASH6P	3	1	3.00	1.00	ONLY_REF_SPLICE	WASH5P^ENSG00000282458.1	chr19:66346:-	WASH6P^ENSG00000182484.15	chrX:156021999:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2116:4153:22261,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2155:34952:7217,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1288:29173:19185	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1153:25234:18576	YES_LDAS	0.4029	GT	1.9656	AG	1.8256	["GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chrX]"]
RAP1B--RAP1A	2	0	1.00	0.00	ONLY_REF_SPLICE	RAP1B^ENSG00000127314.18	chr12:68657217:+	RAP1A^ENSG00000116473.14	chr1:111703336:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2209:12363:28863,&rna_s1221_S42@LH00166:156:2373MLLT3:6:2125:15368:1160	.	NO_LDAS	0.1007	GT	1.9656	AG	1.9219	["ChimerSeq","CCLE_StarF2019","INTERCHROMOSOMAL[chr12--chr1]"]
NONO--KAT6A	2	0	2.00	0.00	INCL_NON_REF_SPLICE	NONO^ENSG00000147140.17	chrX:71290778:+	KAT6A^ENSG00000083168.11	chr8:41933275:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2153:15895:28895,&rna_s1221_S42@LH00166:156:2373MLLT3:6:1157:14841:1336	.	NO_LDAS	0.2015	GC	1.7819	AG	1.4566	["INTERCHROMOSOMAL[chrX--chr8]"]
CU633906.2--CIAPIN1	2	0	0.67	0.00	ONLY_REF_SPLICE	CU633906.2^ENSG00000278903.3	chr21:6322697:+	CIAPIN1^ENSG00000005194.15	chr16:57429280:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1179:7112:23287,&rna_s1221_S42@LH00166:156:2373MLLT3:7:1256:48137:6736	.	YES_LDAS	0.0675	GT	1.9219	AG	1.9329	["INTERCHROMOSOMAL[chr21--chr16]"]
AC009533.1--MIR4307HG	2	0	2.00	0.00	INCL_NON_REF_SPLICE	AC009533.1^ENSG00000111788.10	chr12:9310083:+	MIR4307HG^ENSG00000257612.2	chr14:26881418:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1112:41868:1513,&rna_s1221_S42@LH00166:156:2373MLLT3:7:2149:43356:1945	.	NO_LDAS	0.2015	GT	1.5656	AG	1.8323	["INTERCHROMOSOMAL[chr12--chr14]"]
ABI3--IGL-@-ext	2	0	1.00	0.00	INCL_NON_REF_SPLICE	ABI3^ENSG00000108798.9	chr17:49222500:+	IGL-@-ext^IGL-.g@-ext	chr22:22906790:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2249:43375:8546,&rna_s1221_S42@LH00166:156:2373MLLT3:4:1148:19871:16974	.	NO_LDAS	0.1007	GG	0.9056	CA	1.4295	["INTERCHROMOSOMAL[chr17--chr22]"]
ZNF91--UBXN6	1	0	1.00	0.00	ONLY_REF_SPLICE	ZNF91^ENSG00000167232.14	chr19:23395325:-	UBXN6^ENSG00000167671.12	chr19:4445623:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1281:47878:18400	.	YES_LDAS	0.1007	GT	1.8323	AG	1.4566	["INTRACHROMOSOMAL[chr19:18.85Mb]"]
ZNF85--CHMP1A	1	0	1.00	0.00	ONLY_REF_SPLICE	ZNF85^ENSG00000105750.15	chr19:20935047:+	CHMP1A^ENSG00000131165.16	chr16:89647331:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1109:11855:16285	.	NO_LDAS	0.1007	GT	1.7819	AG	1.8892	["INTERCHROMOSOMAL[chr19--chr16]"]
ZNF532--KRIT1	1	0	1.00	0.00	ONLY_REF_SPLICE	ZNF532^ENSG00000074657.14	chr18:58977668:+	KRIT1^ENSG00000001631.16	chr7:92242137:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2236:21767:13690	.	NO_LDAS	0.1007	GT	1.9329	AG	1.8892	["INTERCHROMOSOMAL[chr18--chr7]"]
ZNF433-AS1--DNAJC5	1	0	1.00	0.00	ONLY_REF_SPLICE	ZNF433-AS1^ENSG00000219665.8	chr19:12001822:+	DNAJC5^ENSG00000101152.11	chr20:63928335:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1116:8027:13561	.	YES_LDAS	0.1007	GT	1.8295	AG	1.9219	["INTERCHROMOSOMAL[chr19--chr20]"]
ZMYM4--C9orf85	1	0	1.00	0.00	ONLY_REF_SPLICE	ZMYM4^ENSG00000146463.12	chr1:35269085:+	C9orf85^ENSG00000155621.15	chr9:71947006:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2272:49080:1192	.	YES_LDAS	0.1007	GT	1.5656	AG	1.3753	["INTERCHROMOSOMAL[chr1--chr9]"]
ZKSCAN1--PPP2R2D	1	0	1.00	0.00	ONLY_REF_SPLICE	ZKSCAN1^ENSG00000106261.17	chr7:100024307:+	PPP2R2D^ENSG00000175470.20	chr10:131934458:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1139:21517:24569	.	YES_LDAS	0.1007	GT	1.9899	AG	1.9329	["INTERCHROMOSOMAL[chr7--chr10]"]
ZFC3H1--CBWD3	1	0	0.33	0.00	INCL_NON_REF_SPLICE	ZFC3H1^ENSG00000133858.17	chr12:71663013:-	CBWD3^ENSG00000196873.16	chr9:68298918:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1211:4393:22358	.	NO_LDAS	0.0332	GT	1.9329	AG	1.9086	["INTERCHROMOSOMAL[chr12--chr9]"]
ZDHHC13--TSEN2	1	0	1.00	0.00	ONLY_REF_SPLICE	ZDHHC13^ENSG00000177054.14	chr11:19117276:+	TSEN2^ENSG00000154743.19	chr3:12489784:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2226:33556:24216	.	NO_LDAS	0.1007	GT	1.6402	AG	1.8256	["INTERCHROMOSOMAL[chr11--chr3]"]
ZBTB17--PGS1	1	0	1.00	0.00	ONLY_REF_SPLICE	ZBTB17^ENSG00000116809.12	chr1:15973039:-	PGS1^ENSG00000087157.19	chr17:78414879:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2238:49265:8114	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8062	["INTERCHROMOSOMAL[chr1--chr17]"]
WDR70--TTC33	1	0	1.00	0.00	ONLY_REF_SPLICE	WDR70^ENSG00000082068.9	chr5:37516590:+	TTC33^ENSG00000113638.14	chr5:40747019:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2291:13824:28286	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8892	["INTRACHROMOSOMAL[chr5:2.76Mb]"]
WDR26--CAPN2	1	0	1.00	0.00	ONLY_REF_SPLICE	WDR26^ENSG00000162923.17	chr1:224431477:-	CAPN2^ENSG00000162909.18	chr1:223759270:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2230:32409:17134	.	YES_LDAS	0.1007	GT	1.5656	AG	1.9656	["INTRACHROMOSOMAL[chr1:0.61Mb]"]
WASHC3--CABLES1	1	0	1.00	0.00	ONLY_REF_SPLICE	WASHC3^ENSG00000120860.11	chr12:102050189:-	CABLES1^ENSG00000134508.12	chr18:23257227:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1245:5558:3035	.	NO_LDAS	0.1007	GT	1.9656	AG	1.5329	["INTERCHROMOSOMAL[chr12--chr18]"]
VPS37B--CLEC2D	1	0	1.00	0.00	ONLY_REF_SPLICE	VPS37B^ENSG00000139722.7	chr12:122895952:-	CLEC2D^ENSG00000069493.15	chr12:9687902:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1254:23209:5422	.	YES_LDAS	0.1007	GT	1.5628	AG	1.8295	["INTRACHROMOSOMAL[chr12:113.17Mb]"]
USP6NL--CREM	1	0	1.00	0.00	ONLY_REF_SPLICE	USP6NL^ENSG00000148429.14	chr10:11611443:-	CREM^ENSG00000095794.19	chr10:35206895:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1270:14712:25145	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9656	["INTRACHROMOSOMAL[chr10:23.52Mb]"]
USP3--DDX6	1	0	1.00	0.00	INCL_NON_REF_SPLICE	USP3^ENSG00000140455.17	chr15:63504792:+	DDX6^ENSG00000110367.13	chr11:118749784:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2258:18152:24248	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9219	["INTERCHROMOSOMAL[chr15--chr11]"]
USP15--ATF1	1	0	1.00	0.00	ONLY_REF_SPLICE	USP15^ENSG00000135655.16	chr12:62260503:+	ATF1^ENSG00000123268.9	chr12:50780140:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1124:45067:19458	.	YES_LDAS	0.1007	GT	1.7819	AG	1.5656	["INTRACHROMOSOMAL[chr12:11.44Mb]"]
UQCRH--TSPOAP1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	UQCRH^ENSG00000173660.12	chr1:46303820:+	TSPOAP1^ENSG00000005379.17	chr17:58309266:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1142:30911:13738	.	NO_LDAS	0.1007	GT	1.7968	AG	0.9968	["INTERCHROMOSOMAL[chr1--chr17]"]
UQCRH--TRIM22	1	0	1.00	0.00	ONLY_REF_SPLICE	UQCRH^ENSG00000173660.12	chr1:46309127:+	TRIM22^ENSG00000132274.16	chr11:5698315:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1215:10117:3788	.	YES_LDAS	0.1007	GT	1.5058	AG	1.7819	["INTERCHROMOSOMAL[chr1--chr11]"]
UPF2--RSU1	1	0	1.00	0.00	ONLY_REF_SPLICE	UPF2^ENSG00000151461.20	chr10:12014024:-	RSU1^ENSG00000148484.18	chr10:16754989:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1247:14314:5678	.	NO_LDAS	0.1007	GT	1.3996	AG	1.8892	["INTRACHROMOSOMAL[chr10:4.55Mb]"]
UIMC1--SIMC1	1	0	1.00	0.00	ONLY_REF_SPLICE	UIMC1^ENSG00000087206.17	chr5:176951474:-	SIMC1^ENSG00000170085.18	chr5:176322273:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1220:37550:28158	.	YES_LDAS	0.1007	GT	1.7056	AG	1.8256	["INTRACHROMOSOMAL[chr5:0.56Mb]"]
UBR4--IGH-@-ext	1	0	0.04	0.00	INCL_NON_REF_SPLICE	UBR4^ENSG00000127481.15	chr1:19122893:-	IGH-@-ext^IGH-.g@-ext	chr14:106636688:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2247:28831:1449	.	YES_LDAS	0.004	GC	1.9329	CA	1.6402	["INTERCHROMOSOMAL[chr1--chr14]"]
UBR3--PHIP	1	0	1.00	0.00	ONLY_REF_SPLICE	UBR3^ENSG00000144357.18	chr2:169875949:+	PHIP^ENSG00000146247.14	chr6:78990985:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1152:31244:6207	.	YES_LDAS	0.1007	GT	1.9656	AG	1.6895	["INTERCHROMOSOMAL[chr2--chr6]"]
UBQLN1--RPS24	1	0	1.00	0.00	ONLY_REF_SPLICE	UBQLN1^ENSG00000135018.14	chr9:83707500:-	RPS24^ENSG00000138326.21	chr10:78035352:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2137:18475:14074	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8323	["INTERCHROMOSOMAL[chr9--chr10]"]
UBL5--SLC9A8	1	0	1.00	0.00	INCL_NON_REF_SPLICE	UBL5^ENSG00000198258.11	chr19:9828389:+	SLC9A8^ENSG00000197818.12	chr20:49864728:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1130:5050:5390	.	YES_LDAS	0.1007	GC	1.9899	AG	1.8295	["INTERCHROMOSOMAL[chr19--chr20]"]
UBE2H--MED13	1	0	1.00	0.00	INCL_NON_REF_SPLICE	UBE2H^ENSG00000186591.13	chr7:129952503:-	MED13^ENSG00000108510.10	chr17:61946140:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2270:50180:23832	.	NO_LDAS	0.1007	GT	1.9219	AG	1.6895	["INTERCHROMOSOMAL[chr7--chr17]"]
UBE2E2--TTC39A	1	0	1.00	0.00	ONLY_REF_SPLICE	UBE2E2^ENSG00000182247.10	chr3:23217312:+	TTC39A^ENSG00000085831.16	chr1:51321825:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1156:8249:24457	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9329	["INTERCHROMOSOMAL[chr3--chr1]"]
UBE2E2--DEK	1	0	1.00	0.00	ONLY_REF_SPLICE	UBE2E2^ENSG00000182247.10	chr3:23203262:+	DEK^ENSG00000124795.17	chr6:18249839:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2279:40527:18929	.	YES_LDAS	0.1007	GT	1.4716	AG	1.9329	["INTERCHROMOSOMAL[chr3--chr6]"]
U2AF1--CFL1	1	0	0.50	0.00	ONLY_REF_SPLICE	U2AF1^ENSG00000160201.12	chr21:43095438:-	CFL1^ENSG00000172757.13	chr11:65856242:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2169:26029:29728	.	YES_LDAS	0.0504	GT	1.9656	AG	1.5656	["INTERCHROMOSOMAL[chr21--chr11]"]
TYW1--SLC16A1-AS1	1	0	1.00	0.00	ONLY_REF_SPLICE	TYW1^ENSG00000198874.13	chr7:67195337:+	SLC16A1-AS1^ENSG00000226419.8	chr1:112960477:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1111:20519:8963	.	YES_LDAS	0.1007	GT	1.6729	AG	1.8256	["INTERCHROMOSOMAL[chr7--chr1]"]
TUBB1P1--TUBB	1	0	0.50	0.00	ONLY_REF_SPLICE	TUBB1P1^ENSG00000249726.1	chrY:18387030:+	TUBB^ENSG00000196230.14	chr6:30722537:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1139:30393:17519	.	NO_LDAS	0.0504	GT	1.9086	AG	1.8323	["INTERCHROMOSOMAL[chrY--chr6]"]
TTLL11--SMC4	1	0	1.00	0.00	ONLY_REF_SPLICE	TTLL11^ENSG00000175764.15	chr9:122031723:-	SMC4^ENSG00000113810.16	chr3:160411920:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2136:21610:17551	.	YES_LDAS	0.1007	GT	1.7465	AG	1.7819	["INTERCHROMOSOMAL[chr9--chr3]"]
TTC37--ZSCAN18	1	0	1.00	0.00	INCL_NON_REF_SPLICE	TTC37^ENSG00000198677.12	chr5:95543184:-	ZSCAN18^ENSG00000121413.13	chr19:58109093:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1228:38641:23351	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8892	["INTERCHROMOSOMAL[chr5--chr19]"]
TSC22D3--STIL	1	0	1.00	0.00	INCL_NON_REF_SPLICE	TSC22D3^ENSG00000157514.16	chrX:107713362:-	STIL^ENSG00000123473.16	chr1:47263113:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2202:51077:13882	.	YES_LDAS	0.1007	GT	1.9899	AG	1.6402	["INTERCHROMOSOMAL[chrX--chr1]"]
TRIOBP--ADCY6	1	0	1.00	0.00	ONLY_REF_SPLICE	TRIOBP^ENSG00000100106.22	chr22:37751828:+	ADCY6^ENSG00000174233.12	chr12:48778257:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1128:50273:28831	.	YES_LDAS	0.1007	GT	1.7465	AG	1.9329	["INTERCHROMOSOMAL[chr22--chr12]"]
TRAPPC3--THRAP3	1	0	1.00	0.00	ONLY_REF_SPLICE	TRAPPC3^ENSG00000054116.12	chr1:36149337:-	THRAP3^ENSG00000054118.15	chr1:36282533:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1108:51391:3820	.	YES_LDAS	0.1007	GT	1.5329	AG	1.5656	["INTRACHROMOSOMAL[chr1:0.07Mb]","LOCAL_INVERSION:-:+:[68379]"]
TRAK1--VPS13B	1	0	1.00	0.00	ONLY_REF_SPLICE	TRAK1^ENSG00000182606.17	chr3:42125614:+	VPS13B^ENSG00000132549.19	chr8:99776775:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2160:29913:28029	.	YES_LDAS	0.1007	GT	1.8256	AG	1.9899	["INTERCHROMOSOMAL[chr3--chr8]"]
TPTE2--IDS	1	0	0.33	0.00	ONLY_REF_SPLICE	TPTE2^ENSG00000132958.17	chr13:19492850:-	IDS^ENSG00000010404.18	chrX:149483218:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1148:44549:12023	.	NO_LDAS	0.0332	GT	1.8295	AG	1.9329	["INTERCHROMOSOMAL[chr13--chrX]"]
TOP2A--MAST4	1	0	0.50	0.00	INCL_NON_REF_SPLICE	TOP2A^ENSG00000131747.15	chr17:40389977:-	MAST4^ENSG00000069020.18	chr5:67160554:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1160:37041:16285	.	NO_LDAS	0.0504	GT	1.9086	AG	1.7819	["INTERCHROMOSOMAL[chr17--chr5]"]
TNIK--RBM33	1	0	1.00	0.00	ONLY_REF_SPLICE	TNIK^ENSG00000154310.17	chr3:171460007:-	RBM33^ENSG00000184863.11	chr7:155672867:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1222:51567:23223	.	YES_LDAS	0.1007	GT	1.8256	AG	1.8062	["INTERCHROMOSOMAL[chr3--chr7]"]
TNFRSF17--GARRE1	1	0	1.00	0.00	ONLY_REF_SPLICE	TNFRSF17^ENSG00000048462.11	chr16:11965454:+	GARRE1^ENSG00000166398.14	chr19:34333704:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2232:1629:28046	.	YES_LDAS	0.1007	GT	1.7819	AG	1.8892	["INTERCHROMOSOMAL[chr16--chr19]"]
TMPRSS2--ERG	1	0	1.00	0.00	ONLY_REF_SPLICE	TMPRSS2^ENSG00000184012.14	chr21:41508081:-	ERG^ENSG00000157554.19	chr21:38584945:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1156:37494:17968	.	NO_LDAS	0.1007	GT	1.6895	AG	1.9219	["ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr21:2.80Mb]"]
TMED8--SSU72	1	0	1.00	0.00	ONLY_REF_SPLICE	TMED8^ENSG00000100580.8	chr14:77376936:-	SSU72^ENSG00000160075.12	chr1:1564916:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1115:19973:9460	.	YES_LDAS	0.1007	GT	1.7056	AG	1.9086	["INTERCHROMOSOMAL[chr14--chr1]"]
TMED3--MINAR1	1	0	1.00	0.00	ONLY_REF_SPLICE	TMED3^ENSG00000166557.14	chr15:79314005:+	MINAR1^ENSG00000169330.9	chr15:79456098:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1266:30689:11527	.	YES_LDAS	0.1007	GT	1.7968	AG	1.9656	["INTRACHROMOSOMAL[chr15:0.00Mb]","NEIGHBORS[4904]"]
TMC8--AC093766.1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	TMC8^ENSG00000167895.15	chr17:78133930:+	AC093766.1^ENSG00000250501.3	chr4:138801874:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2236:14592:10165	.	NO_LDAS	0.0504	AT	1.8323	AC	1.9086	["INTERCHROMOSOMAL[chr17--chr4]"]
TM2D3--MDM2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	TM2D3^ENSG00000184277.13	chr15:101636649:-	MDM2^ENSG00000135679.25	chr12:68828898:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1241:33204:21845	.	NO_LDAS	0.1007	GT	1.5656	AG	1.9656	["INTERCHROMOSOMAL[chr15--chr12]"]
TELO2--AP000919.3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	TELO2^ENSG00000100726.15	chr16:1494391:+	AP000919.3^ENSG00000272625.1	chr18:2921131:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2146:52103:2939	.	NO_LDAS	0.1007	GT	1.8892	AG	1.8892	["INTERCHROMOSOMAL[chr16--chr18]"]
TBC1D22A--ZADH2	1	0	1.00	0.00	ONLY_REF_SPLICE	TBC1D22A^ENSG00000054611.14	chr22:47111603:+	ZADH2^ENSG00000180011.7	chr18:75202340:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1202:20694:27052	.	YES_LDAS	0.1007	GT	1.6402	AG	1.4566	["INTERCHROMOSOMAL[chr22--chr18]"]
TAX1BP1--GOLPH3	1	0	1.00	0.00	ONLY_REF_SPLICE	TAX1BP1^ENSG00000106052.13	chr7:27800090:+	GOLPH3^ENSG00000113384.14	chr5:32126636:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2124:33898:23976	.	YES_LDAS	0.1007	GT	1.7232	AG	1.9086	["INTERCHROMOSOMAL[chr7--chr5]"]
TANGO2--GTPBP1	1	0	1.00	0.00	ONLY_REF_SPLICE	TANGO2^ENSG00000183597.16	chr22:20043443:+	GTPBP1^ENSG00000100226.16	chr22:38715907:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2144:23875:18176	.	YES_LDAS	0.1007	GT	1.9899	AG	1.8062	["INTRACHROMOSOMAL[chr22:18.64Mb]"]
TACC3--DDB1	1	0	0.33	0.00	INCL_NON_REF_SPLICE	TACC3^ENSG00000013810.20	chr4:1745062:+	DDB1^ENSG00000167986.15	chr11:61301770:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1181:3644:5262	.	NO_LDAS	0.0332	GT	1.5219	AG	1.0530	["INTERCHROMOSOMAL[chr4--chr11]"]
SUCO--AAGAB	1	0	1.00	0.00	ONLY_REF_SPLICE	SUCO^ENSG00000094975.14	chr1:172579267:+	AAGAB^ENSG00000103591.13	chr15:67236820:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1143:42543:23832	.	NO_LDAS	0.1007	GT	1.9219	AG	1.9656	["INTERCHROMOSOMAL[chr1--chr15]"]
SUCLG2-AS1--TAFA1	1	0	1.00	0.00	ONLY_REF_SPLICE	SUCLG2-AS1^ENSG00000241316.8	chr3:67671004:+	TAFA1^ENSG00000183662.11	chr3:68006624:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1285:30024:18448	.	YES_LDAS	0.1007	GT	1.6895	AG	1.9086	["INTRACHROMOSOMAL[chr3:0.06Mb]","NEIGHBORS[56534]"]
STX2--MRPS35	1	0	1.00	0.00	ONLY_REF_SPLICE	STX2^ENSG00000111450.14	chr12:130798525:-	MRPS35^ENSG00000061794.13	chr12:27755181:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1244:1749:21589	.	YES_LDAS	0.1007	GT	1.4295	AG	1.7465	["INTRACHROMOSOMAL[chr12:103.03Mb]"]
STOML2--OSBP	1	0	1.00	0.00	INCL_NON_REF_SPLICE	STOML2^ENSG00000165283.16	chr9:35099906:-	OSBP^ENSG00000110048.12	chr11:59615677:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2230:23875:27565	.	YES_LDAS	0.1007	GT	1.7465	AG	1.6895	["INTERCHROMOSOMAL[chr9--chr11]"]
STAT6--IGH-@-ext	1	0	0.33	0.00	INCL_NON_REF_SPLICE	STAT6^ENSG00000166888.12	chr12:57096955:-	IGH-@-ext^IGH-.g@-ext	chr14:106319563:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2253:26196:29087	.	NO_LDAS	0.0332	GG	1.7968	AT	1.7232	["INTERCHROMOSOMAL[chr12--chr14]"]
ST3GAL2--PLCXD1	1	0	1.00	0.00	ONLY_REF_SPLICE	ST3GAL2^ENSG00000157350.13	chr16:70438949:-	PLCXD1^ENSG00000182378.15	chrX:284167:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1289:35090:13417	.	YES_LDAS	0.1007	GT	1.7968	AG	1.9086	["INTERCHROMOSOMAL[chr16--chrX]"]
SRSF4--GSTCD	1	0	1.00	0.00	ONLY_REF_SPLICE	SRSF4^ENSG00000116350.17	chr1:29181646:-	GSTCD^ENSG00000138780.15	chr4:105717593:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1125:47221:16173	.	YES_LDAS	0.1007	GT	1.8323	AG	1.8892	["INTERCHROMOSOMAL[chr1--chr4]"]
SREBF1--FAM222B	1	0	1.00	0.00	ONLY_REF_SPLICE	SREBF1^ENSG00000072310.17	chr17:17836727:-	FAM222B^ENSG00000173065.13	chr17:28766707:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2205:43856:27933	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8892	["INTRACHROMOSOMAL[chr17:10.92Mb]"]
SPTAN1--HNRNPC	1	0	1.00	0.00	INCL_NON_REF_SPLICE	SPTAN1^ENSG00000197694.18	chr9:128632478:+	HNRNPC^ENSG00000092199.18	chr14:21263579:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1291:45159:2186	.	YES_LDAS	0.1007	GT	1.8892	AG	1.4566	["INTERCHROMOSOMAL[chr9--chr14]"]
SPCS1--LINC01541	1	0	0.50	0.00	INCL_NON_REF_SPLICE	SPCS1^ENSG00000114902.14	chr3:52706675:+	LINC01541^ENSG00000260676.5	chr18:71520998:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1270:34138:15292	.	NO_LDAS	0.0504	GT	1.9656	AG	1.9656	["INTERCHROMOSOMAL[chr3--chr18]"]
SPCS1--AC097375.5	1	0	0.50	0.00	INCL_NON_REF_SPLICE	SPCS1^ENSG00000114902.14	chr3:52706675:+	AC097375.5^ENSG00000286720.1	chr4:152018533:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1270:34138:15292	.	NO_LDAS	0.0504	GT	1.9656	AG	1.9656	["INTERCHROMOSOMAL[chr3--chr4]"]
SP110--AL356273.2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	SP110^ENSG00000135899.19	chr2:230185994:-	AL356273.2^ENSG00000238061.2	chr1:185281798:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1176:35470:6544	.	NO_LDAS	0.1007	GT	1.8892	AG	0.9183	["INTERCHROMOSOMAL[chr2--chr1]"]
SOX5--PAPOLA	1	0	1.00	0.00	ONLY_REF_SPLICE	SOX5^ENSG00000134532.19	chr12:24213343:-	PAPOLA^ENSG00000090060.18	chr14:96562819:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1143:26455:1272	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8295	["INTERCHROMOSOMAL[chr12--chr14]"]
SOS1--TAF15	1	0	1.00	0.00	ONLY_REF_SPLICE	SOS1^ENSG00000115904.14	chr2:39120336:-	TAF15^ENSG00000270647.6	chr17:35834566:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2202:1758:5326	.	NO_LDAS	0.1007	GT	1.9329	AG	1.9329	["INTERCHROMOSOMAL[chr2--chr17]"]
SORD2P--AKR1B15	1	0	0.50	0.00	ONLY_REF_SPLICE	SORD2P^ENSG00000259479.6	chr15:44828450:-	AKR1B15^ENSG00000227471.9	chr7:134564598:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1170:20639:16157	.	YES_LDAS	0.0504	GT	1.9086	AG	1.9329	["INTERCHROMOSOMAL[chr15--chr7]"]
SORD2P--AC007317.1	1	0	0.50	0.00	ONLY_REF_SPLICE	SORD2P^ENSG00000259479.6	chr15:44828450:-	AC007317.1^ENSG00000285898.1	chr2:40677586:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1170:20639:16157	.	YES_LDAS	0.0504	GT	1.9086	AG	1.9329	["INTERCHROMOSOMAL[chr15--chr2]"]
SOCS5--TTC7A	1	0	1.00	0.00	ONLY_REF_SPLICE	SOCS5^ENSG00000171150.9	chr2:46699449:+	TTC7A^ENSG00000068724.17	chr2:46993450:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1246:18226:9380	.	YES_LDAS	0.1007	GT	1.4566	AG	1.8323	["INTRACHROMOSOMAL[chr2:0.14Mb]"]
SNX5--SRPK2	1	0	1.00	0.00	ONLY_REF_SPLICE	SNX5^ENSG00000089006.17	chr20:17968375:-	SRPK2^ENSG00000135250.17	chr7:105203785:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1272:2082:7201	.	YES_LDAS	0.1007	GT	1.5656	AG	1.8062	["INTERCHROMOSOMAL[chr20--chr7]"]
SNU13--LLPH	1	0	1.00	0.00	ONLY_REF_SPLICE	SNU13^ENSG00000100138.15	chr22:41680244:-	LLPH^ENSG00000139233.7	chr12:66129113:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2239:33140:22598	.	YES_LDAS	0.1007	GT	1.7056	AG	1.8295	["INTERCHROMOSOMAL[chr22--chr12]"]
SNRNP200--WIZ	1	0	1.00	0.00	INCL_NON_REF_SPLICE	SNRNP200^ENSG00000144028.15	chr2:96291751:-	WIZ^ENSG00000011451.21	chr19:15422830:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2180:2248:20179	.	YES_LDAS	0.1007	GT	1.8892	AG	1.5656	["INTERCHROMOSOMAL[chr2--chr19]"]
SNRNP200--RARS1	1	0	1.00	0.00	ONLY_REF_SPLICE	SNRNP200^ENSG00000144028.15	chr2:96285180:-	RARS1^ENSG00000113643.9	chr5:168488602:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2244:50920:16782	.	YES_LDAS	0.1007	GT	1.7819	AG	1.3383	["INTERCHROMOSOMAL[chr2--chr5]"]
SNORD3A--RPS3A	1	0	0.13	0.00	INCL_NON_REF_SPLICE	SNORD3A^ENSG00000263934.5	chr17:19188110:+	RPS3A^ENSG00000145425.10	chr4:151102901:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2128:18956:8498	.	YES_LDAS	0.0131	GT	1.5628	AG	1.9899	["INTERCHROMOSOMAL[chr17--chr4]"]
SNHG8--VEZT	1	0	1.00	0.00	ONLY_REF_SPLICE	SNHG8^ENSG00000269893.8	chr4:118279137:+	VEZT^ENSG00000028203.18	chr12:95282313:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2247:42201:19746	.	NO_LDAS	0.1007	GT	1.9329	AG	1.7968	["INTERCHROMOSOMAL[chr4--chr12]"]
SNHG21--ZNF592	1	0	1.00	0.00	ONLY_REF_SPLICE	SNHG21^ENSG00000250988.7	chr15:82754784:+	ZNF592^ENSG00000166716.10	chr15:84782657:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2105:4347:23047	.	YES_LDAS	0.1007	GT	1.6729	AG	1.7232	["INTRACHROMOSOMAL[chr15:1.99Mb]"]
SMIM4--CAPRIN1	1	0	1.00	0.00	ONLY_REF_SPLICE	SMIM4^ENSG00000168273.8	chr3:52536906:+	CAPRIN1^ENSG00000135387.21	chr11:34071726:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1178:42136:27453	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8256	["INTERCHROMOSOMAL[chr3--chr11]"]
SMG1--NPIPB12	1	0	0.50	0.00	INCL_NON_REF_SPLICE	SMG1^ENSG00000157106.17	chr16:18858170:-	NPIPB12^ENSG00000169203.16	chr16:29505872:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1291:38447:5550	.	NO_LDAS	0.0504	GT	1.4566	AG	1.9329	["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:10.56Mb]"]
SMARCA4--SCARF2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	SMARCA4^ENSG00000127616.19	chr19:10989332:+	SCARF2^ENSG00000244486.9	chr22:20425455:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1174:9682:12071	.	NO_LDAS	0.1007	GC	1.8892	AG	1.6895	["INTERCHROMOSOMAL[chr19--chr22]"]
SLC7A5P1--SMG1	1	0	1.00	0.00	ONLY_REF_SPLICE	SLC7A5P1^ENSG00000260727.2	chr16:29613103:-	SMG1^ENSG00000157106.17	chr16:18900044:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1125:2646:2538	.	YES_LDAS	0.1007	GT	1.7465	AG	1.9086	["INTRACHROMOSOMAL[chr16:10.69Mb]"]
SLC52A2--ESRRA	1	0	1.00	0.00	ONLY_REF_SPLICE	SLC52A2^ENSG00000185803.12	chr8:144359423:+	ESRRA^ENSG00000173153.17	chr11:64307168:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2250:9830:17871	.	YES_LDAS	0.1007	GT	1.9086	AG	1.9086	["INTERCHROMOSOMAL[chr8--chr11]"]
SLC3A2--CKAP5	1	0	1.00	0.00	ONLY_REF_SPLICE	SLC3A2^ENSG00000168003.18	chr11:62856381:+	CKAP5^ENSG00000175216.15	chr11:46760784:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2224:25974:6784	.	YES_LDAS	0.1007	GT	1.7465	AG	1.9086	["INTRACHROMOSOMAL[chr11:16.01Mb]"]
SLC35F2--NLGN4Y	1	0	1.00	0.00	ONLY_REF_SPLICE	SLC35F2^ENSG00000110660.15	chr11:107858658:-	NLGN4Y^ENSG00000165246.14	chrY:14719459:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2242:11698:11623	.	YES_LDAS	0.1007	GT	1.8062	AG	1.5546	["INTERCHROMOSOMAL[chr11--chrY]"]
SHOX2--LHX4	1	0	1.00	0.00	ONLY_REF_SPLICE	SHOX2^ENSG00000168779.20	chr3:158102678:-	LHX4^ENSG00000121454.6	chr1:180271835:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1216:50476:5855	.	NO_LDAS	0.1007	GT	1.7465	AG	1.8892	["INTERCHROMOSOMAL[chr3--chr1]"]
SH3GLB2--DISC1	1	0	1.00	0.00	ONLY_REF_SPLICE	SH3GLB2^ENSG00000148341.18	chr9:129021091:-	DISC1^ENSG00000162946.23	chr1:231854739:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1217:50374:11639	.	NO_LDAS	0.1007	GT	1.7232	AG	1.9656	["INTERCHROMOSOMAL[chr9--chr1]"]
SH3GL1--SAFB2	1	0	1.00	0.00	ONLY_REF_SPLICE	SH3GL1^ENSG00000141985.9	chr19:4400324:-	SAFB2^ENSG00000130254.12	chr19:5600260:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1255:29423:19041	.	NO_LDAS	0.1007	GT	1.8256	AG	1.6402	["INTRACHROMOSOMAL[chr19:1.19Mb]"]
SETX--ISCA1	1	0	1.00	0.00	ONLY_REF_SPLICE	SETX^ENSG00000107290.14	chr9:132334608:-	ISCA1^ENSG00000135070.15	chr9:86267805:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1297:39344:12872	.	NO_LDAS	0.1007	GT	1.5628	AG	1.7232	["INTRACHROMOSOMAL[chr9:45.98Mb]"]
SETD1B--UNC119B	1	0	1.00	0.00	ONLY_REF_SPLICE	SETD1B^ENSG00000139718.11	chr12:121817904:+	UNC119B^ENSG00000175970.11	chr12:120719920:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1218:39242:20131	.	YES_LDAS	0.1007	GT	1.7968	AG	1.8295	["INTRACHROMOSOMAL[chr12:1.08Mb]"]
SEPTIN14--AP006222.1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AP006222.1^ENSG00000228463.10	chr1:289370:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1262:43597:1721	.	YES_LDAS	0.1007	GT	1.5546	AG	1.7968	["INTERCHROMOSOMAL[chr7--chr1]"]
SEPTIN14--AL031259.1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AL031259.1^ENSG00000287411.1	chr6:170614324:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2189:39538:9300	.	YES_LDAS	0.1007	GT	1.5546	AG	1.9086	["INTERCHROMOSOMAL[chr7--chr6]"]
SEPSECS--CYP7B1	1	0	1.00	0.00	ONLY_REF_SPLICE	SEPSECS^ENSG00000109618.13	chr4:25160256:-	CYP7B1^ENSG00000172817.4	chr8:64624539:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2263:50171:27212	.	YES_LDAS	0.1007	GT	1.9656	AG	1.7819	["INTERCHROMOSOMAL[chr4--chr8]"]
SENP3--KIF2A	1	0	1.00	0.00	ONLY_REF_SPLICE	SENP3^ENSG00000161956.13	chr17:7570933:+	KIF2A^ENSG00000068796.19	chr5:62347130:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1123:13602:1433	.	YES_LDAS	0.1007	GT	1.6895	AG	1.8892	["INTERCHROMOSOMAL[chr17--chr5]"]
SELENOF--RPL32	1	0	0.50	0.00	INCL_NON_REF_SPLICE	SELENOF^ENSG00000183291.17	chr1:86863490:-	RPL32^ENSG00000144713.13	chr3:12836223:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2294:38604:13962	.	YES_LDAS	0.0504	GT	1.8892	AG	1.9656	["INTERCHROMOSOMAL[chr1--chr3]"]
SEC31A--ARHGAP15	1	0	1.00	0.00	ONLY_REF_SPLICE	SEC31A^ENSG00000138674.17	chr4:82844386:-	ARHGAP15^ENSG00000075884.14	chr2:143519266:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2231:46463:15308	.	YES_LDAS	0.1007	GT	1.6895	AG	1.7968	["INTERCHROMOSOMAL[chr4--chr2]"]
SDHA--CLPTM1L	1	0	0.50	0.00	ONLY_REF_SPLICE	SDHA^ENSG00000073578.17	chr5:236599:+	CLPTM1L^ENSG00000049656.14	chr5:1334383:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1154:40897:17583	.	YES_LDAS	0.0504	GT	1.9656	AG	1.8256	["INTRACHROMOSOMAL[chr5:1.06Mb]"]
SAMD5--SASH1	1	0	1.00	0.00	ONLY_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	SASH1^ENSG00000111961.18	chr6:148390134:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2173:33888:13738	.	NO_LDAS	0.1007	GT	1.8295	AG	1.9219	["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.70Mb]"]
SAMD12--TAF2	1	0	1.00	0.00	ONLY_REF_SPLICE	SAMD12^ENSG00000177570.15	chr8:118580715:-	TAF2^ENSG00000064313.12	chr8:119746934:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1283:20879:9492	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9329	["INTRACHROMOSOMAL[chr8:1.11Mb]"]
RSRP1--MTRF1	1	0	1.00	0.00	ONLY_REF_SPLICE	RSRP1^ENSG00000117616.18	chr1:25245150:-	MTRF1^ENSG00000120662.16	chr13:41260915:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2164:13168:13497	.	YES_LDAS	0.1007	GT	1.9086	AG	1.9329	["INTERCHROMOSOMAL[chr1--chr13]"]
RSF1--USP14	1	0	1.00	0.00	ONLY_REF_SPLICE	RSF1^ENSG00000048649.13	chr11:77820528:-	USP14^ENSG00000101557.15	chr18:196637:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2216:1740:23720	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9219	["INTERCHROMOSOMAL[chr11--chr18]"]
RRAS2--HERC1	1	0	1.00	0.00	ONLY_REF_SPLICE	RRAS2^ENSG00000133818.14	chr11:14358763:-	HERC1^ENSG00000103657.14	chr15:63775649:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1268:35322:12888	.	YES_LDAS	0.1007	GT	1.9329	AG	1.9086	["INTERCHROMOSOMAL[chr11--chr15]"]
RPS6KA1--ARID1A	1	0	1.00	0.00	ONLY_REF_SPLICE	RPS6KA1^ENSG00000117676.14	chr1:26536969:+	ARID1A^ENSG00000117713.20	chr1:26729651:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2297:12400:1881	.	YES_LDAS	0.1007	GT	1.9219	AG	1.8892	["INTRACHROMOSOMAL[chr1:0.12Mb]"]
RPS4X--TBL1XR1	1	0	1.00	0.00	ONLY_REF_SPLICE	RPS4X^ENSG00000198034.11	chrX:72275053:-	TBL1XR1^ENSG00000177565.18	chr3:177046189:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1154:25493:20403	.	YES_LDAS	0.1007	GT	1.8062	AG	1.8323	["INTERCHROMOSOMAL[chrX--chr3]"]
RPRD1A--PIGF	1	0	1.00	0.00	ONLY_REF_SPLICE	RPRD1A^ENSG00000141425.18	chr18:36067254:-	PIGF^ENSG00000151665.13	chr2:46581591:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1124:48433:18785	.	YES_LDAS	0.1007	GT	1.6402	AG	1.8892	["INTERCHROMOSOMAL[chr18--chr2]"]
RPL4--SLC39A7	1	0	1.00	0.00	ONLY_REF_SPLICE	RPL4^ENSG00000174444.15	chr15:66503058:-	SLC39A7^ENSG00000112473.18	chr6:33201745:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1113:45465:11911	.	YES_LDAS	0.1007	GT	1.9086	AG	1.7819	["INTERCHROMOSOMAL[chr15--chr6]"]
RPL29--MAP3K5	1	0	0.50	0.00	INCL_NON_REF_SPLICE	RPL29^ENSG00000162244.12	chr3:51993896:-	MAP3K5^ENSG00000197442.10	chr6:136613172:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2272:51216:28606	.	YES_LDAS	0.0504	AT	1.5656	AC	1.5301	["INTERCHROMOSOMAL[chr3--chr6]"]
RPL27A--RPL12	1	0	1.00	0.00	ONLY_REF_SPLICE	RPL27A^ENSG00000166441.13	chr11:8684892:+	RPL12^ENSG00000197958.13	chr9:127449708:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1234:50975:15724	.	YES_LDAS	0.1007	GT	1.7968	AG	1.7465	["HGNC_GENEFAM","INTERCHROMOSOMAL[chr11--chr9]"]
RPL23AP53--SEPTIN14	1	0	1.00	0.00	ONLY_REF_SPLICE	RPL23AP53^ENSG00000223508.5	chr8:230804:-	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2178:16755:13273	.	NO_LDAS	0.1007	GT	1.9329	AG	1.9899	["INTERCHROMOSOMAL[chr8--chr7]"]
RPL23--ZBTB1	1	0	1.00	0.00	ONLY_REF_SPLICE	RPL23^ENSG00000125691.14	chr17:38853022:-	ZBTB1^ENSG00000126804.13	chr14:64521487:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2254:20223:19826	.	YES_LDAS	0.1007	GT	1.9329	AG	1.9086	["INTERCHROMOSOMAL[chr17--chr14]"]
RPL12--CNTROB	1	0	1.00	0.00	ONLY_REF_SPLICE	RPL12^ENSG00000197958.13	chr9:127449281:-	CNTROB^ENSG00000170037.14	chr17:7945728:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1111:40703:10261	.	NO_LDAS	0.1007	GT	1.1033	AG	1.8062	["INTERCHROMOSOMAL[chr9--chr17]"]
ROCK1--UNC50	1	0	0.50	0.00	ONLY_REF_SPLICE	ROCK1^ENSG00000067900.8	chr18:20953578:-	UNC50^ENSG00000115446.12	chr2:98609756:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1107:32085:1673	.	YES_LDAS	0.0504	GT	1.8295	AG	1.9086	["INTERCHROMOSOMAL[chr18--chr2]"]
RNVU1-27--AGO2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	RNVU1-27^ENSG00000274210.1	chr1:148522796:+	AGO2^ENSG00000123908.12	chr8:140585311:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1157:12918:19313	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7968	["INTERCHROMOSOMAL[chr1--chr8]"]
RILPL2--RAB35	1	0	1.00	0.00	ONLY_REF_SPLICE	RILPL2^ENSG00000150977.11	chr12:123423044:-	RAB35^ENSG00000111737.12	chr12:120108467:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1146:49625:21268	.	YES_LDAS	0.1007	GT	1.5546	AG	1.7968	["INTRACHROMOSOMAL[chr12:3.30Mb]"]
RIC1--PTK2B	1	0	1.00	0.00	ONLY_REF_SPLICE	RIC1^ENSG00000107036.12	chr9:5656690:+	PTK2B^ENSG00000120899.18	chr8:27397548:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1239:29302:24152	.	YES_LDAS	0.1007	GT	1.9086	AG	1.9656	["INTERCHROMOSOMAL[chr9--chr8]"]
RERE--SEPTIN6	1	0	1.00	0.00	ONLY_REF_SPLICE	RERE^ENSG00000142599.19	chr1:8817160:-	SEPTIN6^ENSG00000125354.24	chrX:119675668:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2146:11226:22213	.	YES_LDAS	0.1007	GT	1.8295	AG	1.8295	["INTERCHROMOSOMAL[chr1--chrX]"]
RCC1--ZFAND3	1	0	1.00	0.00	ONLY_REF_SPLICE	RCC1^ENSG00000180198.16	chr1:28508160:+	ZFAND3^ENSG00000156639.12	chr6:37929959:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2263:17430:19153	.	NO_LDAS	0.1007	GT	1.7968	AG	1.9656	["INTERCHROMOSOMAL[chr1--chr6]"]
RCC1--MED23	1	0	1.00	0.00	ONLY_REF_SPLICE	RCC1^ENSG00000180198.16	chr1:28508160:+	MED23^ENSG00000112282.18	chr6:131603204:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1152:46463:29087	.	YES_LDAS	0.1007	GT	1.7968	AG	1.9656	["INTERCHROMOSOMAL[chr1--chr6]"]
RCC1--MAPKAPK5	1	0	1.00	0.00	ONLY_REF_SPLICE	RCC1^ENSG00000180198.16	chr1:28508905:+	MAPKAPK5^ENSG00000089022.14	chr12:111888488:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2256:9248:15740	.	YES_LDAS	0.1007	GT	1.4295	AG	1.8295	["INTERCHROMOSOMAL[chr1--chr12]"]
RCC1--LRRFIP1	1	0	1.00	0.00	ONLY_REF_SPLICE	RCC1^ENSG00000180198.16	chr1:28508160:+	LRRFIP1^ENSG00000124831.19	chr2:237772081:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1243:33741:15596	.	NO_LDAS	0.1007	GT	1.7968	AG	1.5546	["INTERCHROMOSOMAL[chr1--chr2]"]
RCC1--CCDC18	1	0	1.00	0.00	ONLY_REF_SPLICE	RCC1^ENSG00000180198.16	chr1:28508160:+	CCDC18^ENSG00000122483.17	chr1:93246105:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1109:9423:6271	.	YES_LDAS	0.1007	GT	1.7968	AG	1.6895	["INTRACHROMOSOMAL[chr1:64.64Mb]"]
RBM6--NPIPB11	1	0	0.17	0.00	ONLY_REF_SPLICE	RBM6^ENSG00000004534.15	chr3:49962685:+	NPIPB11^ENSG00000254206.5	chr16:29394076:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2220:7241:16686	.	YES_LDAS	0.0171	GT	1.9656	AG	1.8892	["INTERCHROMOSOMAL[chr3--chr16]"]
RAP1GDS1--HMGB1	1	0	0.50	0.00	ONLY_REF_SPLICE	RAP1GDS1^ENSG00000138698.15	chr4:98293515:+	HMGB1^ENSG00000189403.15	chr13:30463694:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1167:35368:12456	.	YES_LDAS	0.0504	GT	1.9086	AG	1.1033	["INTERCHROMOSOMAL[chr4--chr13]"]
RALGDS--AC003077.1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	RALGDS^ENSG00000160271.16	chr9:133105932:-	AC003077.1^ENSG00000287011.1	chr7:111761245:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1167:38243:29007	.	YES_LDAS	0.1007	GT	1.9899	AG	1.9086	["INTERCHROMOSOMAL[chr9--chr7]"]
RABGAP1--GEN1	1	0	1.00	0.00	ONLY_REF_SPLICE	RABGAP1^ENSG00000011454.18	chr9:123020459:+	GEN1^ENSG00000178295.15	chr2:17759929:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1123:50938:17775	.	YES_LDAS	0.1007	GT	1.7819	AG	1.7968	["INTERCHROMOSOMAL[chr9--chr2]"]
RAB3GAP1--SMARCAL1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	RAB3GAP1^ENSG00000115839.18	chr2:135113241:+	SMARCAL1^ENSG00000138375.13	chr2:216450979:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1132:21970:14811	.	NO_LDAS	0.1007	GT	1.6402	AG	1.9329	["INTRACHROMOSOMAL[chr2:81.24Mb]"]
RAB35--BAG2	1	0	1.00	0.00	ONLY_REF_SPLICE	RAB35^ENSG00000111737.12	chr12:120103826:-	BAG2^ENSG00000112208.11	chr6:57182032:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1143:36588:28991	.	YES_LDAS	0.1007	GT	1.3383	AG	1.7819	["INTERCHROMOSOMAL[chr12--chr6]"]
PYGO2--HOXA11	1	0	0.50	0.00	INCL_NON_REF_SPLICE	PYGO2^ENSG00000163348.4	chr1:154959264:-	HOXA11^ENSG00000005073.6	chr7:27182433:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2172:15415:19570	.	NO_LDAS	0.0504	GT	1.8323	AG	1.3753	["INTERCHROMOSOMAL[chr1--chr7]"]
PUM1--SLC30A3	1	0	0.50	0.00	INCL_NON_REF_SPLICE	PUM1^ENSG00000134644.16	chr1:30965982:-	SLC30A3^ENSG00000115194.11	chr2:27255169:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1269:51586:4669	.	NO_LDAS	0.0504	GT	1.8892	AG	1.4256	["INTERCHROMOSOMAL[chr1--chr2]"]
PUM1--CNTNAP1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	PUM1^ENSG00000134644.16	chr1:30965982:-	CNTNAP1^ENSG00000108797.12	chr17:42698816:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1269:51586:4669	.	NO_LDAS	0.0504	GT	1.8892	AG	1.4256	["INTERCHROMOSOMAL[chr1--chr17]"]
PTPN6--PTPRU	1	0	1.00	0.00	ONLY_REF_SPLICE	PTPN6^ENSG00000111679.17	chr12:6956568:+	PTPRU^ENSG00000060656.20	chr1:29315372:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1196:30523:11174	.	NO_LDAS	0.1007	GT	1.6402	AG	1.2867	["INTERCHROMOSOMAL[chr12--chr1]"]
PTBP3--TXN	1	0	1.00	0.00	ONLY_REF_SPLICE	PTBP3^ENSG00000119314.16	chr9:112333470:-	TXN^ENSG00000136810.13	chr9:110244843:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2183:31743:16846	.	NO_LDAS	0.1007	GT	1.8295	AG	1.9086	["INTRACHROMOSOMAL[chr9:1.96Mb]"]
PSME3--PPM1M	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PSME3^ENSG00000131467.11	chr17:42834380:+	PPM1M^ENSG00000164088.18	chr3:52247185:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1219:50559:9492	.	NO_LDAS	0.1007	GT	1.9086	AG	1.9329	["INTERCHROMOSOMAL[chr17--chr3]"]
PRKDC--NAPG	1	0	1.00	0.00	ONLY_REF_SPLICE	PRKDC^ENSG00000253729.8	chr8:47839148:-	NAPG^ENSG00000134265.13	chr18:10534466:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2234:24254:10758	.	YES_LDAS	0.1007	GT	1.9656	AG	1.9656	["INTERCHROMOSOMAL[chr8--chr18]"]
PRKAA1--FTO	1	0	1.00	0.00	ONLY_REF_SPLICE	PRKAA1^ENSG00000132356.11	chr5:40764514:-	FTO^ENSG00000140718.21	chr16:53844155:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2240:34989:5134	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7819	["INTERCHROMOSOMAL[chr5--chr16]"]
PPTC7--TNFAIP3	1	0	1.00	0.00	ONLY_REF_SPLICE	PPTC7^ENSG00000196850.6	chr12:110582809:-	TNFAIP3^ENSG00000118503.15	chr6:137871213:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1233:34730:16477	.	NO_LDAS	0.1007	GT	1.7056	AG	1.8892	["INTERCHROMOSOMAL[chr12--chr6]"]
PPP3CA--NFKB1	1	0	1.00	0.00	ONLY_REF_SPLICE	PPP3CA^ENSG00000138814.17	chr4:101346739:-	NFKB1^ENSG00000109320.13	chr4:102566987:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2135:39603:11046	.	YES_LDAS	0.1007	GT	1.6895	AG	1.9656	["INTRACHROMOSOMAL[chr4:1.15Mb]"]
PPP2R5D--FZR1	1	0	1.00	0.00	ONLY_REF_SPLICE	PPP2R5D^ENSG00000112640.16	chr6:42989688:+	FZR1^ENSG00000105325.15	chr19:3525868:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2128:23505:12344	.	YES_LDAS	0.1007	GT	1.7056	AG	1.8892	["INTERCHROMOSOMAL[chr6--chr19]"]
PPP2R2A--TNKS	1	0	1.00	0.00	ONLY_REF_SPLICE	PPP2R2A^ENSG00000221914.11	chr8:26293740:+	TNKS^ENSG00000173273.16	chr8:9580159:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2278:2405:18753	.	NO_LDAS	0.1007	GT	1.7819	AG	1.5301	["INTRACHROMOSOMAL[chr8:16.51Mb]"]
PPP2CA--AL391730.1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PPP2CA^ENSG00000113575.10	chr5:134199086:-	AL391730.1^ENSG00000228940.1	chr1:40939661:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2210:14925:15420	.	NO_LDAS	0.1007	GT	1.5058	AG	1.9219	["INTERCHROMOSOMAL[chr5--chr1]"]
PPP1R9B--ANAPC16	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PPP1R9B^ENSG00000108819.11	chr17:50143605:-	ANAPC16^ENSG00000166295.9	chr10:72220167:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2193:24383:24569	.	YES_LDAS	0.1007	AT	1.6895	AC	1.4716	["INTERCHROMOSOMAL[chr17--chr10]"]
PPP1R21--ARHGAP5	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PPP1R21^ENSG00000162869.16	chr2:48486758:+	ARHGAP5^ENSG00000100852.13	chr14:32154196:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2101:18660:16253	.	YES_LDAS	0.1007	GT	1.5628	AG	1.8295	["INTERCHROMOSOMAL[chr2--chr14]"]
POU5F1--TYW1	1	0	1.00	0.00	ONLY_REF_SPLICE	POU5F1^ENSG00000204531.20	chr6:31166534:-	TYW1^ENSG00000198874.13	chr7:67067285:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1198:37957:23479	.	YES_LDAS	0.1007	GT	1.9329	AG	1.9086	["INTERCHROMOSOMAL[chr6--chr7]"]
POLR2J2--TCP1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	POLR2J2^ENSG00000228049.7	chr7:102665662:-	TCP1^ENSG00000120438.12	chr6:159788143:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2129:18189:9380	.	YES_LDAS	0.0504	GT	1.9329	AG	1.8892	["INTERCHROMOSOMAL[chr7--chr6]"]
POLE--ADRM1	1	0	1.00	0.00	ONLY_REF_SPLICE	POLE^ENSG00000177084.18	chr12:132687254:-	ADRM1^ENSG00000130706.13	chr20:62304461:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2132:38669:23399	.	YES_LDAS	0.1007	GT	1.7465	AG	1.8892	["INTERCHROMOSOMAL[chr12--chr20]"]
PLCG2--AAK1	1	0	1.00	0.00	ONLY_REF_SPLICE	PLCG2^ENSG00000197943.10	chr16:81786182:+	AAK1^ENSG00000115977.21	chr2:69544544:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2102:50152:10229	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8892	["INTERCHROMOSOMAL[chr16--chr2]"]
PKM--MYBL2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PKM^ENSG00000067225.19	chr15:72208749:-	MYBL2^ENSG00000101057.16	chr20:43686999:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1248:33287:12055	.	YES_LDAS	0.1007	GT	1.7232	AG	1.9219	["INTERCHROMOSOMAL[chr15--chr20]"]
PKIG--BIRC6	1	0	1.00	0.00	ONLY_REF_SPLICE	PKIG^ENSG00000168734.14	chr20:44589866:+	BIRC6^ENSG00000115760.14	chr2:32607455:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1274:7814:3003	.	YES_LDAS	0.1007	GT	1.6049	AG	1.4295	["INTERCHROMOSOMAL[chr20--chr2]"]
PIK3CB--POTEG	1	0	0.20	0.00	INCL_NON_REF_SPLICE	PIK3CB^ENSG00000051382.9	chr3:138684664:-	POTEG^ENSG00000187537.13	chr14:19402587:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2129:50605:28606	.	NO_LDAS	0.0201	GT	1.7968	AG	1.5546	["INTERCHROMOSOMAL[chr3--chr14]"]
PIK3CB--ACTBL2	1	0	0.20	0.00	INCL_NON_REF_SPLICE	PIK3CB^ENSG00000051382.9	chr3:138684664:-	ACTBL2^ENSG00000169067.4	chr5:57482383:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2129:50605:28606	.	NO_LDAS	0.0201	GT	1.7968	AG	1.5546	["INTERCHROMOSOMAL[chr3--chr5]"]
PIK3CB--ACTA2	1	0	0.20	0.00	INCL_NON_REF_SPLICE	PIK3CB^ENSG00000051382.9	chr3:138684664:-	ACTA2^ENSG00000107796.13	chr10:88943838:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2129:50605:28606	.	NO_LDAS	0.0201	GT	1.7968	AG	1.5546	["INTERCHROMOSOMAL[chr3--chr10]"]
PHIP--EZR	1	0	1.00	0.00	ONLY_REF_SPLICE	PHIP^ENSG00000146247.14	chr6:79077448:-	EZR^ENSG00000092820.18	chr6:158789371:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2211:5031:24072	.	NO_LDAS	0.1007	GT	1.9086	AG	1.9656	["INTRACHROMOSOMAL[chr6:79.69Mb]"]
PHB2--KREMEN2	1	0	1.00	0.00	ONLY_REF_SPLICE	PHB2^ENSG00000215021.10	chr12:6970196:-	KREMEN2^ENSG00000131650.14	chr16:2966140:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1292:10274:12328	.	YES_LDAS	0.1007	GT	1.9329	AG	1.9329	["INTERCHROMOSOMAL[chr12--chr16]"]
PHACTR4--SRP9	1	0	0.50	0.00	ONLY_REF_SPLICE	PHACTR4^ENSG00000204138.13	chr1:28369825:+	SRP9^ENSG00000143742.14	chr1:225777935:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2240:45557:21941	.	YES_LDAS	0.0504	GT	1.7232	AG	1.7819	["INTRACHROMOSOMAL[chr1:197.28Mb]"]
PELI1--RGPD5	1	0	0.33	0.00	ONLY_REF_SPLICE	PELI1^ENSG00000197329.12	chr2:64108240:-	RGPD5^ENSG00000015568.13	chr2:109819696:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2278:33001:3419	.	NO_LDAS	0.0332	GT	1.9219	AG	1.8892	["INTRACHROMOSOMAL[chr2:45.65Mb]"]
PEBP1--ABCA17P	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PEBP1^ENSG00000089220.5	chr12:118144709:+	ABCA17P^ENSG00000238098.9	chr16:2361116:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1180:9368:13962	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8892	["INTERCHROMOSOMAL[chr12--chr16]"]
PDZD8--YY1	1	0	1.00	0.00	ONLY_REF_SPLICE	PDZD8^ENSG00000165650.12	chr10:117374356:-	YY1^ENSG00000100811.14	chr14:100262304:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1162:4088:14555	.	YES_LDAS	0.1007	GT	1.8295	AG	1.1033	["INTERCHROMOSOMAL[chr10--chr14]"]
PDSS1--ANKRD26	1	0	1.00	0.00	ONLY_REF_SPLICE	PDSS1^ENSG00000148459.16	chr10:26709768:+	ANKRD26^ENSG00000107890.17	chr10:27093799:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1225:4837:2266	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9656	["INTRACHROMOSOMAL[chr10:0.23Mb]"]
PDE7A--ZFAND3	1	0	1.00	0.00	ONLY_REF_SPLICE	PDE7A^ENSG00000205268.11	chr8:65747652:-	ZFAND3^ENSG00000156639.12	chr6:38061593:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1102:15461:24296	.	NO_LDAS	0.1007	GT	1.7465	AG	1.6402	["INTERCHROMOSOMAL[chr8--chr6]"]
PDCD6--WARS1	1	0	1.00	0.00	ONLY_REF_SPLICE	PDCD6^ENSG00000249915.8	chr5:311402:+	WARS1^ENSG00000140105.18	chr14:100342571:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1287:28563:16429	.	NO_LDAS	0.1007	GT	1.9329	AG	1.8892	["INTERCHROMOSOMAL[chr5--chr14]"]
PDCD1--UBE2I	1	0	1.00	0.00	ONLY_REF_SPLICE	PDCD1^ENSG00000188389.11	chr2:241858763:-	UBE2I^ENSG00000103275.21	chr16:1314020:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1224:13492:17102	.	YES_LDAS	0.1007	GT	1.9086	AG	1.9329	["INTERCHROMOSOMAL[chr2--chr16]"]
PCNT--PHC2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PCNT^ENSG00000160299.17	chr21:46432181:+	PHC2^ENSG00000134686.18	chr1:33430995:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1144:40546:8835	.	NO_LDAS	0.1007	GT	1.7465	AG	1.4566	["INTERCHROMOSOMAL[chr21--chr1]"]
PCDHGC3--DENND1A	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PCDHGC3^ENSG00000240184.7	chr5:141477772:+	DENND1A^ENSG00000119522.16	chr9:123380770:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2115:51012:19121	.	NO_LDAS	0.1007	GT	1.6895	AG	1.4256	["INTERCHROMOSOMAL[chr5--chr9]"]
PBX3--MAPKAP1	1	0	1.00	0.00	ONLY_REF_SPLICE	PBX3^ENSG00000167081.18	chr9:125748623:+	MAPKAP1^ENSG00000119487.17	chr9:125657799:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2292:32465:10245	.	YES_LDAS	0.1007	GT	1.5546	AG	1.9656	["TCGA_StarF2019","INTRACHROMOSOMAL[chr9:0.04Mb]","LOCAL_INVERSION:+:-:[40111]"]
PAX5--ATXN10	1	0	1.00	0.00	ONLY_REF_SPLICE	PAX5^ENSG00000196092.14	chr9:36923355:-	ATXN10^ENSG00000130638.17	chr22:45689712:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1158:26492:29375	.	YES_LDAS	0.1007	GT	1.9656	AG	1.5058	["INTERCHROMOSOMAL[chr9--chr22]"]
PATL2--RECQL5	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PATL2^ENSG00000229474.7	chr15:44665816:-	RECQL5^ENSG00000108469.15	chr17:75666571:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2261:11568:26299	.	YES_LDAS	0.1007	AT	1.2729	AC	1.8892	["INTERCHROMOSOMAL[chr15--chr17]"]
PARP1--POLR3C	1	0	1.00	0.00	INCL_NON_REF_SPLICE	PARP1^ENSG00000143799.14	chr1:226385573:-	POLR3C^ENSG00000186141.9	chr1:145842418:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2257:47453:18881	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8892	["INTRACHROMOSOMAL[chr1:80.52Mb]"]
PANK2--RAD17	1	0	1.00	0.00	ONLY_REF_SPLICE	PANK2^ENSG00000125779.23	chr20:3917050:+	RAD17^ENSG00000152942.19	chr5:69400049:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2203:13602:17743	.	YES_LDAS	0.1007	GT	1.9656	AG	1.9329	["INTERCHROMOSOMAL[chr20--chr5]"]
OTUD7B--CSNK1A1	1	0	1.00	0.00	ONLY_REF_SPLICE	OTUD7B^ENSG00000264522.6	chr1:150010448:-	CSNK1A1^ENSG00000113712.19	chr5:149525171:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2262:6797:9348	.	YES_LDAS	0.1007	GT	1.3996	AG	1.7465	["INTERCHROMOSOMAL[chr1--chr5]"]
OTUD5--FGFR4	1	0	1.00	0.00	ONLY_REF_SPLICE	OTUD5^ENSG00000068308.14	chrX:48925847:-	FGFR4^ENSG00000160867.15	chr5:177088239:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2207:11910:3820	.	NO_LDAS	0.1007	GT	1.5058	AG	1.9656	["INTERCHROMOSOMAL[chrX--chr5]"]
OGT--SNX8	1	0	1.00	0.00	ONLY_REF_SPLICE	OGT^ENSG00000147162.14	chrX:71537110:+	SNX8^ENSG00000106266.11	chr7:2278305:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2166:14925:22758	.	NO_LDAS	0.1007	GC	1.9329	AG	1.7232	["INTERCHROMOSOMAL[chrX--chr7]"]
OAS2--OAS1	1	0	1.00	0.00	ONLY_REF_SPLICE	OAS2^ENSG00000111335.14	chr12:112978785:+	OAS1^ENSG00000089127.15	chr12:112916509:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1297:43014:1897	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8062	["INTRACHROMOSOMAL[chr12:0.05Mb]","LOCAL_REARRANGEMENT:+:[45176]"]
OAS2--FUS	1	0	1.00	0.00	INCL_NON_REF_SPLICE	OAS2^ENSG00000111335.14	chr12:113005037:+	FUS^ENSG00000089280.19	chr16:31190367:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2144:16663:9043	.	YES_LDAS	0.1007	GC	1.4566	AG	1.8892	["INTERCHROMOSOMAL[chr12--chr16]"]
NUP93--WDR37	1	0	1.00	0.00	ONLY_REF_SPLICE	NUP93^ENSG00000102900.13	chr16:56805632:+	WDR37^ENSG00000047056.16	chr10:1084403:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1147:51179:14859	.	YES_LDAS	0.1007	GT	1.7465	AG	1.7968	["INTERCHROMOSOMAL[chr16--chr10]"]
NUP93--RN7SKP9	1	0	0.17	0.00	INCL_NON_REF_SPLICE	NUP93^ENSG00000102900.13	chr16:56805632:+	RN7SKP9^ENSG00000201793.1	chr13:99205906:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174	.	YES_LDAS	0.0171	GT	1.7465	AG	1.7465	["INTERCHROMOSOMAL[chr16--chr13]"]
NUP93--RN7SKP80	1	0	0.17	0.00	INCL_NON_REF_SPLICE	NUP93^ENSG00000102900.13	chr16:56805632:+	RN7SKP80^ENSG00000202058.1	chr22:42565133:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174	.	YES_LDAS	0.0171	GT	1.7465	AG	1.7465	["INTERCHROMOSOMAL[chr16--chr22]"]
NUP93--RN7SKP180	1	0	0.17	0.00	INCL_NON_REF_SPLICE	NUP93^ENSG00000102900.13	chr16:56805632:+	RN7SKP180^ENSG00000200783.1	chr17:72663954:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174	.	YES_LDAS	0.0171	GT	1.7465	AG	1.7465	["INTERCHROMOSOMAL[chr16--chr17]"]
NUP93--RN7SKP173	1	0	0.17	0.00	INCL_NON_REF_SPLICE	NUP93^ENSG00000102900.13	chr16:56805632:+	RN7SKP173^ENSG00000199691.1	chr20:38761724:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174	.	YES_LDAS	0.0171	GT	1.7465	AG	1.7465	["INTERCHROMOSOMAL[chr16--chr20]"]
NUP93--RN7SKP133	1	0	0.17	0.00	INCL_NON_REF_SPLICE	NUP93^ENSG00000102900.13	chr16:56805632:+	RN7SKP133^ENSG00000201715.1	chr5:17345814:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174	.	YES_LDAS	0.0171	GT	1.7465	AG	1.7465	["INTERCHROMOSOMAL[chr16--chr5]"]
NUP93--7SK	1	0	0.17	0.00	INCL_NON_REF_SPLICE	NUP93^ENSG00000102900.13	chr16:56805632:+	7SK^ENSG00000271394.1	chr17:35889672:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174	.	YES_LDAS	0.0171	GT	1.7465	AG	1.7465	["INTERCHROMOSOMAL[chr16--chr3]"]
NUP210--PITPNA	1	0	1.00	0.00	ONLY_REF_SPLICE	NUP210^ENSG00000132182.12	chr3:13351879:-	PITPNA^ENSG00000174238.15	chr17:1538952:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2277:44697:13017	.	NO_LDAS	0.1007	GT	1.8295	AG	1.8892	["INTERCHROMOSOMAL[chr3--chr17]"]
NUP210--NCKAP1L	1	0	1.00	0.00	ONLY_REF_SPLICE	NUP210^ENSG00000132182.12	chr3:13351879:-	NCKAP1L^ENSG00000123338.13	chr12:54511803:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1267:1989:29247	.	YES_LDAS	0.1007	GT	1.8295	AG	1.9086	["INTERCHROMOSOMAL[chr3--chr12]"]
NUP188--TGM1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	NUP188^ENSG00000095319.14	chr9:129005776:+	TGM1^ENSG00000092295.12	chr14:24264404:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1140:27305:19506	.	NO_LDAS	0.1007	GT	1.9086	AG	1.6895	["INTERCHROMOSOMAL[chr9--chr14]"]
NUMA1--FTO	1	0	1.00	0.00	INCL_NON_REF_SPLICE	NUMA1^ENSG00000137497.18	chr11:72014696:-	FTO^ENSG00000140718.21	chr16:54115688:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2118:42154:21749	.	NO_LDAS	0.1007	GT	1.8062	AG	1.4566	["INTERCHROMOSOMAL[chr11--chr16]"]
NTAN1--HNRNPC	1	0	0.50	0.00	ONLY_REF_SPLICE	NTAN1^ENSG00000157045.9	chr16:15055891:-	HNRNPC^ENSG00000092199.18	chr14:21213117:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2235:22765:10581	.	YES_LDAS	0.0504	GT	1.8892	AG	1.9899	["INTERCHROMOSOMAL[chr16--chr14]"]
NPEPPS--NEK9	1	0	0.50	0.00	ONLY_REF_SPLICE	NPEPPS^ENSG00000141279.17	chr17:47531555:+	NEK9^ENSG00000119638.14	chr14:75124223:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2276:47027:28238	.	YES_LDAS	0.0504	GT	1.4295	AG	1.9656	["INTERCHROMOSOMAL[chr17--chr14]"]
NOP53--DHX34	1	0	1.00	0.00	ONLY_REF_SPLICE	NOP53^ENSG00000105373.19	chr19:47745783:+	DHX34^ENSG00000134815.19	chr19:47381980:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2288:32723:7681	.	YES_LDAS	0.1007	GT	1.4566	AG	1.7232	["INTRACHROMOSOMAL[chr19:0.36Mb]"]
NLRC5--PSME3IP1	1	0	1.00	0.00	ONLY_REF_SPLICE	NLRC5^ENSG00000140853.16	chr16:57067828:+	PSME3IP1^ENSG00000172775.17	chr16:57173869:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1284:19612:16558	.	YES_LDAS	0.1007	GT	1.9899	AG	1.5546	["INTRACHROMOSOMAL[chr16:0.07Mb]","LOCAL_INVERSION:+:-:[68935]"]
NEAT1--ZBTB4	1	0	1.00	0.00	INCL_NON_REF_SPLICE	NEAT1^ENSG00000245532.9	chr11:65430674:+	ZBTB4^ENSG00000174282.12	chr17:7463515:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2156:14222:6095	.	YES_LDAS	0.1007	GT	1.9656	AG	1.1033	["INTERCHROMOSOMAL[chr11--chr17]"]
NDUFS4--ARL15	1	0	1.00	0.00	INCL_NON_REF_SPLICE	NDUFS4^ENSG00000164258.12	chr5:53683221:+	ARL15^ENSG00000185305.11	chr5:54171928:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1170:22146:3932	.	YES_LDAS	0.1007	GT	1.8295	AG	1.8295	["INTRACHROMOSOMAL[chr5:0.20Mb]"]
NDUFAF6--AC113385.3	1	0	0.07	0.00	ONLY_REF_SPLICE	NDUFAF6^ENSG00000156170.13	chr8:95025205:+	AC113385.3^ENSG00000275374.1	chr5:100375784:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2212:14065:10149	.	YES_LDAS	0.0071	GT	1.7819	AG	1.9086	["INTERCHROMOSOMAL[chr8--chr5]"]
NCOA7--NRDC	1	0	1.00	0.00	ONLY_REF_SPLICE	NCOA7^ENSG00000111912.20	chr6:125855240:+	NRDC^ENSG00000078618.22	chr1:51834170:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1166:27305:6015	.	YES_LDAS	0.1007	GT	1.5058	AG	1.7819	["INTERCHROMOSOMAL[chr6--chr1]"]
NAP1L1--AHR	1	0	1.00	0.00	ONLY_REF_SPLICE	NAP1L1^ENSG00000187109.15	chr12:76084567:-	AHR^ENSG00000106546.14	chr7:17309936:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1188:25891:16830	.	YES_LDAS	0.1007	GT	1.9219	AG	1.8323	["INTERCHROMOSOMAL[chr12--chr7]"]
MYO5C--MYO5A	1	0	1.00	0.00	ONLY_REF_SPLICE	MYO5C^ENSG00000128833.13	chr15:52269753:-	MYO5A^ENSG00000197535.15	chr15:52340394:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1207:34480:15436	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9219	["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr15:0.01Mb]","LOCAL_REARRANGEMENT:-:[11479]"]
MYO1C--SLC25A39	1	0	1.00	0.00	ONLY_REF_SPLICE	MYO1C^ENSG00000197879.17	chr17:1467242:-	SLC25A39^ENSG00000013306.16	chr17:44321767:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2169:40462:29231	.	NO_LDAS	0.1007	GT	1.7465	AG	1.9656	["INTRACHROMOSOMAL[chr17:42.83Mb]"]
MYCBP2-AS1--SLC7A6	1	0	1.00	0.00	ONLY_REF_SPLICE	MYCBP2-AS1^ENSG00000236051.7	chr13:77092567:+	SLC7A6^ENSG00000103064.15	chr16:68294705:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2155:42330:6896	.	YES_LDAS	0.1007	GT	1.9329	AG	1.4295	["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr13--chr16]"]
MTRF1--SLF1	1	0	1.00	0.00	ONLY_REF_SPLICE	MTRF1^ENSG00000120662.16	chr13:41233890:-	SLF1^ENSG00000133302.13	chr5:94628811:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1169:7990:7441	.	YES_LDAS	0.1007	GT	1.6402	AG	1.9086	["INTERCHROMOSOMAL[chr13--chr5]"]
MSANTD2--SNX25	1	0	1.00	0.00	ONLY_REF_SPLICE	MSANTD2^ENSG00000120458.13	chr11:124799871:-	SNX25^ENSG00000109762.16	chr4:185264438:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1159:34443:7072	.	NO_LDAS	0.1007	GT	1.8062	AG	1.7465	["INTERCHROMOSOMAL[chr11--chr4]"]
MRTFA--CSNK2A2	1	0	1.00	0.00	ONLY_REF_SPLICE	MRTFA^ENSG00000196588.20	chr22:40463221:-	CSNK2A2^ENSG00000070770.10	chr16:58186856:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1214:15969:3227	.	YES_LDAS	0.1007	GT	1.9329	AG	1.6402	["INTERCHROMOSOMAL[chr22--chr16]"]
MR1--PIEZO2	1	0	1.00	0.00	ONLY_REF_SPLICE	MR1^ENSG00000153029.15	chr1:181034074:+	PIEZO2^ENSG00000154864.13	chr18:10979660:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2185:29284:10021	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8892	["INTERCHROMOSOMAL[chr1--chr18]"]
MKRN1--NCOR2	1	0	1.00	0.00	ONLY_REF_SPLICE	MKRN1^ENSG00000133606.11	chr7:140479160:-	NCOR2^ENSG00000196498.13	chr12:124457162:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2156:46149:13385	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8323	["INTERCHROMOSOMAL[chr7--chr12]"]
MICA--TENT5C	1	0	1.00	0.00	ONLY_REF_SPLICE	MICA^ENSG00000204520.14	chr6:31400763:+	TENT5C^ENSG00000183508.5	chr1:117622842:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2283:29275:21348	.	YES_LDAS	0.1007	GT	1.5656	AG	1.8892	["INTERCHROMOSOMAL[chr6--chr1]"]
MIB1--VAPA	1	0	1.00	0.00	ONLY_REF_SPLICE	MIB1^ENSG00000101752.12	chr18:21741812:+	VAPA^ENSG00000101558.14	chr18:9931810:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2162:5447:11142	.	YES_LDAS	0.1007	GT	1.4566	AG	1.9219	["INTRACHROMOSOMAL[chr18:11.74Mb]"]
MED26--AC241585.1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	MED26^ENSG00000105085.11	chr19:16627872:-	AC241585.1^ENSG00000223612.3	chr1:145233055:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1150:11152:12536	.	YES_LDAS	0.0504	GT	1.5058	AG	1.7465	["INTERCHROMOSOMAL[chr19--chr1]"]
MED15--ATXN3	1	0	0.33	0.00	INCL_NON_REF_SPLICE	MED15^ENSG00000099917.17	chr22:20566562:+	ATXN3^ENSG00000066427.24	chr14:92071040:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1148:25817:6127	.	YES_LDAS	0.0332	GC	1.5850	AG	1.5656	["INTERCHROMOSOMAL[chr22--chr14]"]
MED13L--WASHC3	1	0	1.00	0.00	ONLY_REF_SPLICE	MED13L^ENSG00000123066.9	chr12:116237468:-	WASHC3^ENSG00000120860.11	chr12:102046119:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2172:34702:4477	.	YES_LDAS	0.1007	GT	1.9656	AG	1.9656	["INTRACHROMOSOMAL[chr12:13.90Mb]"]
MBP--ZNF516	1	0	1.00	0.00	ONLY_REF_SPLICE	MBP^ENSG00000197971.16	chr18:77132580:-	ZNF516^ENSG00000101493.11	chr18:76380303:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1284:4782:15789	.	YES_LDAS	0.1007	GT	1.5219	AG	1.4295	["ChimerSeq","INTRACHROMOSOMAL[chr18:0.48Mb]"]
MBOAT7--AC012313.8	1	0	1.00	0.00	INCL_NON_REF_SPLICE	MBOAT7^ENSG00000125505.17	chr19:54183647:-	AC012313.8^ENSG00000269473.1	chr19:58443483:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2174:32317:6047	.	NO_LDAS	0.1007	AT	1.9329	AC	1.4256	["INTRACHROMOSOMAL[chr19:4.25Mb]"]
MAVS--RPS9	1	0	1.00	0.00	ONLY_REF_SPLICE	MAVS^ENSG00000088888.18	chr20:3846903:+	RPS9^ENSG00000170889.14	chr19:54201160:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1107:38188:26059	.	YES_LDAS	0.1007	GT	1.6895	AG	1.4566	["INTERCHROMOSOMAL[chr20--chr19]"]
MAP3K13--TP63	1	0	1.00	0.00	ONLY_REF_SPLICE	MAP3K13^ENSG00000073803.14	chr3:185285643:+	TP63^ENSG00000073282.14	chr3:189737740:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2255:9331:18128	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9329	["INTRACHROMOSOMAL[chr3:4.14Mb]"]
MAD1L1--SNX8	1	0	1.00	0.00	ONLY_REF_SPLICE	MAD1L1^ENSG00000002822.16	chr7:1898200:-	SNX8^ENSG00000106266.11	chr7:2278305:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1230:37457:22197	.	YES_LDAS	0.1007	GT	1.9086	AG	1.7232	["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.02Mb]","LOCAL_REARRANGEMENT:-:[18527]"]
LZTFL1--NCL	1	0	1.00	0.00	INCL_NON_REF_SPLICE	LZTFL1^ENSG00000163818.18	chr3:45832971:-	NCL^ENSG00000115053.17	chr2:231460293:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1268:33546:13497	.	NO_LDAS	0.1007	GT	1.5329	AG	1.7819	["INTERCHROMOSOMAL[chr3--chr2]"]
LTN1--C9orf129	1	0	0.50	0.00	INCL_NON_REF_SPLICE	LTN1^ENSG00000198862.14	chr21:28960529:-	C9orf129^ENSG00000204352.4	chr9:93335477:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2231:51900:23896	.	YES_LDAS	0.0504	AT	1.9329	AC	1.4295	["INTERCHROMOSOMAL[chr21--chr9]"]
LRBA--ANKRD17	1	0	1.00	0.00	ONLY_REF_SPLICE	LRBA^ENSG00000198589.14	chr4:150588048:-	ANKRD17^ENSG00000132466.19	chr4:73102547:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2257:9793:11815	.	YES_LDAS	0.1007	GT	1.6895	AG	1.5058	["INTRACHROMOSOMAL[chr4:77.01Mb]"]
LINC01055--SMC4	1	0	1.00	0.00	ONLY_REF_SPLICE	LINC01055^ENSG00000235366.2	chr13:45701027:-	SMC4^ENSG00000113810.16	chr3:160411920:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1192:13260:26379	.	YES_LDAS	0.1007	GT	1.8295	AG	1.7819	["INTERCHROMOSOMAL[chr13--chr3]"]
LINC00957--PRKAR1B-AS1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	LINC00957^ENSG00000235314.1	chr7:44041068:+	PRKAR1B-AS1^ENSG00000237181.1	chr7:607865:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2169:7759:6432	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9656	["INTRACHROMOSOMAL[chr7:43.43Mb]"]
LIN37--CHD8	1	0	1.00	0.00	INCL_NON_REF_SPLICE	LIN37^ENSG00000267796.8	chr19:35753253:+	CHD8^ENSG00000100888.15	chr14:21393491:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1233:2988:20723	.	NO_LDAS	0.1007	GT	1.7968	AG	1.5329	["INTERCHROMOSOMAL[chr19--chr14]"]
LAT2--EIF4H	1	0	1.00	0.00	ONLY_REF_SPLICE	LAT2^ENSG00000086730.17	chr7:74199685:+	EIF4H^ENSG00000106682.16	chr7:74194741:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1103:1971:2298	.	YES_LDAS	0.1007	GT	1.7465	AG	1.9656	["INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_REARRANGEMENT:+:[2530]"]
KLHL2--LRBA	1	0	1.00	0.00	ONLY_REF_SPLICE	KLHL2^ENSG00000109466.14	chr4:165207902:+	LRBA^ENSG00000198589.14	chr4:150735366:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1218:18420:29007	.	YES_LDAS	0.1007	GT	1.3383	AG	1.9899	["INTRACHROMOSOMAL[chr4:14.19Mb]"]
KIF13B--DNA2	1	0	1.00	0.00	ONLY_REF_SPLICE	KIF13B^ENSG00000197892.13	chr8:29262980:-	DNA2^ENSG00000138346.15	chr10:68470163:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1252:14777:25578	.	YES_LDAS	0.1007	GT	1.8256	AG	1.7465	["INTERCHROMOSOMAL[chr8--chr10]"]
KIF11--SUPT20H	1	0	1.00	0.00	ONLY_REF_SPLICE	KIF11^ENSG00000138160.7	chr10:92616832:+	SUPT20H^ENSG00000102710.20	chr13:37024442:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2183:10357:24489	.	YES_LDAS	0.1007	GT	1.8323	AG	1.8892	["INTERCHROMOSOMAL[chr10--chr13]"]
KIF11--IDE	1	0	1.00	0.00	ONLY_REF_SPLICE	KIF11^ENSG00000138160.7	chr10:92621473:+	IDE^ENSG00000119912.18	chr10:92537550:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1107:13177:29247	.	YES_LDAS	0.1007	GT	1.5058	AG	1.6729	["INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_INVERSION:+:-:[9]"]
KDM6B--RPL29	1	0	1.00	0.00	INCL_NON_REF_SPLICE	KDM6B^ENSG00000132510.11	chr17:7849312:+	RPL29^ENSG00000162244.12	chr3:51993856:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1273:42275:19458	.	NO_LDAS	0.1007	GT	1.5656	AG	1.5656	["INTERCHROMOSOMAL[chr17--chr3]"]
KCTD13--GLYR1	1	0	1.00	0.00	ONLY_REF_SPLICE	KCTD13^ENSG00000174943.11	chr16:29925790:-	GLYR1^ENSG00000140632.17	chr16:4832912:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1201:47360:25642	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9899	["INTRACHROMOSOMAL[chr16:25.06Mb]"]
KCND2--RPL41	1	0	1.00	0.00	ONLY_REF_SPLICE	KCND2^ENSG00000184408.10	chr7:120275747:+	RPL41^ENSG00000229117.9	chr12:56116775:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2122:7713:3307	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8892	["INTERCHROMOSOMAL[chr7--chr12]"]
KCNAB2--RPL22	1	0	1.00	0.00	ONLY_REF_SPLICE	KCNAB2^ENSG00000069424.15	chr1:6040645:+	RPL22^ENSG00000116251.11	chr1:6197756:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2275:27009:6111	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8256	["INTRACHROMOSOMAL[chr1:0.08Mb]","LOCAL_INVERSION:+:-:[83827]"]
JUND--CCDC13	1	0	1.00	0.00	INCL_NON_REF_SPLICE	JUND^ENSG00000130522.6	chr19:18280504:-	CCDC13^ENSG00000244607.7	chr3:42739711:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2191:19696:19009	.	NO_LDAS	0.1007	GT	1.7465	AG	1.8892	["INTERCHROMOSOMAL[chr19--chr3]"]
ITPKB--PDE8A	1	0	1.00	0.00	ONLY_REF_SPLICE	ITPKB^ENSG00000143772.9	chr1:226735527:-	PDE8A^ENSG00000073417.15	chr15:85097948:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1265:28230:27196	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7819	["INTERCHROMOSOMAL[chr1--chr15]"]
ITPKB--FNBP1	1	0	1.00	0.00	ONLY_REF_SPLICE	ITPKB^ENSG00000143772.9	chr1:226735527:-	FNBP1^ENSG00000187239.17	chr9:129994958:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1238:29099:13001	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9656	["INTERCHROMOSOMAL[chr1--chr9]"]
ITGA4--PSMD3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	ITGA4^ENSG00000115232.14	chr2:181522308:+	PSMD3^ENSG00000108344.15	chr17:39988716:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2223:38086:14507	.	YES_LDAS	0.1007	GT	1.7819	AG	1.8892	["INTERCHROMOSOMAL[chr2--chr17]"]
ITGA4--FUS	1	0	1.00	0.00	ONLY_REF_SPLICE	ITGA4^ENSG00000115232.14	chr2:181485992:+	FUS^ENSG00000089280.19	chr16:31189123:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1168:12576:27020	.	NO_LDAS	0.1007	GT	1.8256	AG	1.8295	["INTERCHROMOSOMAL[chr2--chr16]"]
IRAG2--THAP12P6	1	0	1.00	0.00	INCL_NON_REF_SPLICE	IRAG2^ENSG00000118308.15	chr12:25033947:+	THAP12P6^ENSG00000227882.1	chr13:26234834:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2136:9266:22374	.	NO_LDAS	0.1007	GT	1.9656	AG	1.5546	["INTERCHROMOSOMAL[chr12--chr13]"]
IQGAP3--GBA	1	0	0.50	0.00	ONLY_REF_SPLICE	IQGAP3^ENSG00000183856.11	chr1:156569376:-	GBA^ENSG00000177628.16	chr1:155237578:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2118:35164:4188	.	YES_LDAS	0.0504	GT	1.4566	AG	1.9329	["INTRACHROMOSOMAL[chr1:1.28Mb]"]
INTS13--RABEP1	1	0	1.00	0.00	ONLY_REF_SPLICE	INTS13^ENSG00000064102.15	chr12:26922616:-	RABEP1^ENSG00000029725.17	chr17:5308694:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1119:17449:8098	.	YES_LDAS	0.1007	GT	1.9086	AG	1.7819	["INTERCHROMOSOMAL[chr12--chr17]"]
INTS10--TRIM22	1	0	1.00	0.00	ONLY_REF_SPLICE	INTS10^ENSG00000104613.12	chr8:19845797:+	TRIM22^ENSG00000132274.16	chr11:5698315:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2188:16367:4557	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7819	["INTERCHROMOSOMAL[chr8--chr11]"]
INSR--RPL28	1	0	1.00	0.00	INCL_NON_REF_SPLICE	INSR^ENSG00000171105.14	chr19:7115214:-	RPL28^ENSG00000108107.15	chr19:55388263:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1198:38206:12280	.	YES_LDAS	0.1007	GT	1.9219	AG	1.7968	["INTRACHROMOSOMAL[chr19:48.09Mb]"]
IL3RA--APOBEC3D	1	0	0.50	0.00	INCL_NON_REF_SPLICE	IL3RA^ENSG00000185291.12	chrX:1341829:+	APOBEC3D^ENSG00000243811.12	chr22:39032800:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1149:18383:21797	.	YES_LDAS	0.0504	GT	1.6895	AG	1.9329	["INTERCHROMOSOMAL[chrY--chr22]"]
IL17RB--GTF2I	1	0	1.00	0.00	ONLY_REF_SPLICE	IL17RB^ENSG00000056736.10	chr3:53849795:+	GTF2I^ENSG00000263001.7	chr7:74698961:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2148:48987:18048	.	YES_LDAS	0.1007	GT	1.9656	AG	1.5219	["INTERCHROMOSOMAL[chr3--chr7]"]
IGL-@-ext--RPL3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22882946:-	RPL3^ENSG00000100316.16	chr22:39314825:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1282:4060:6944	.	YES_LDAS	0.1007	AG	0.9183	CA	1.7465	["INTRACHROMOSOMAL[chr22:16.39Mb]"]
IGL-@-ext--MTATP6P1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22906529:-	MTATP6P1^ENSG00000248527.1	chr1:634123:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1148:2766:28510	.	YES_LDAS	0.1007	TT	1.8256	TA	1.8062	["INTERCHROMOSOMAL[chr22--chr1]"]
IGL-@-ext--HNRNPA3	1	0	0.33	0.00	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22922757:-	HNRNPA3^ENSG00000170144.21	chr2:177219037:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2113:48451:22694	.	YES_LDAS	0.0332	GT	1.2729	AG	1.7819	["INTERCHROMOSOMAL[chr22--chr2]"]
IGL-@-ext--HNRNPA3	1	0	0.33	0.00	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22906505:-	HNRNPA3^ENSG00000170144.21	chr2:177219037:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2113:48451:22694	.	YES_LDAS	0.0332	GT	1.2310	AG	1.7819	["INTERCHROMOSOMAL[chr22--chr2]"]
IGL-@-ext--HNRNPA3	1	0	0.33	0.00	INCL_NON_REF_SPLICE	IGL-@-ext^IGL-.g@-ext	chr22:22901139:-	HNRNPA3^ENSG00000170144.21	chr2:177219037:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2113:48451:22694	.	YES_LDAS	0.0332	GT	1.2310	AG	1.7819	["INTERCHROMOSOMAL[chr22--chr2]"]
IGH-@-ext--SEC24B	1	0	0.05	0.00	INCL_NON_REF_SPLICE	IGH-@-ext^IGH-.g@-ext	chr14:106636760:+	SEC24B^ENSG00000138802.11	chr4:109433894:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1174:4273:5518	.	YES_LDAS	0.005	AA	1.7465	CT	1.3383	["INTERCHROMOSOMAL[chr14--chr4]"]
IGH-@-ext--RIPOR1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	IGH-@-ext^IGH-.g@-ext	chr14:105771201:+	RIPOR1^ENSG00000039523.20	chr16:67544181:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1145:2590:25610	.	YES_LDAS	0.0504	CC	1.8295	GT	1.8256	["INTERCHROMOSOMAL[chr14--chr16]"]
IGH-@-ext--RIPOR1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	IGH-@-ext^IGH-.g@-ext	chr14:105742866:+	RIPOR1^ENSG00000039523.20	chr16:67544181:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1145:2590:25610	.	YES_LDAS	0.0504	CC	1.8295	GT	1.8256	["INTERCHROMOSOMAL[chr14--chr16]"]
IGH-@-ext--CMIP	1	0	0.05	0.00	INCL_NON_REF_SPLICE	IGH-@-ext^IGH-.g@-ext	chr14:106636760:+	CMIP^ENSG00000153815.17	chr16:81445374:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2168:16201:19169	.	YES_LDAS	0.005	AA	1.7465	TT	1.9329	["INTERCHROMOSOMAL[chr14--chr16]"]
IGF2BP3--FAM114A2	1	0	1.00	0.00	ONLY_REF_SPLICE	IGF2BP3^ENSG00000136231.14	chr7:23342064:-	FAM114A2^ENSG00000055147.19	chr5:154002969:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2218:41239:7281	.	YES_LDAS	0.1007	GT	1.9899	AG	1.7819	["INTERCHROMOSOMAL[chr7--chr5]"]
IFI6--CNPPD1	1	0	1.00	0.00	ONLY_REF_SPLICE	IFI6^ENSG00000126709.16	chr1:27669245:-	CNPPD1^ENSG00000115649.16	chr2:219176847:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1170:3219:9396	.	YES_LDAS	0.1007	GT	1.4256	AG	1.4716	["INTERCHROMOSOMAL[chr1--chr2]"]
IFI44L--CAND1	1	0	1.00	0.00	ONLY_REF_SPLICE	IFI44L^ENSG00000137959.17	chr1:78620571:+	CAND1^ENSG00000111530.13	chr12:67307397:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2239:25197:18833	.	YES_LDAS	0.1007	GT	1.6895	AG	1.8892	["INTERCHROMOSOMAL[chr1--chr12]"]
HYOU1--COL9A2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	HYOU1^ENSG00000149428.19	chr11:119052295:-	COL9A2^ENSG00000049089.15	chr1:40309985:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1153:51253:17935	.	YES_LDAS	0.1007	GT	1.9656	AG	1.7968	["INTERCHROMOSOMAL[chr11--chr1]"]
HSP90AA1--UBXN4	1	0	1.00	0.00	INCL_NON_REF_SPLICE	HSP90AA1^ENSG00000080824.19	chr14:102084910:-	UBXN4^ENSG00000144224.17	chr2:135769813:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2197:36228:24008	.	NO_LDAS	0.1007	GT	0.8366	AG	1.5329	["INTERCHROMOSOMAL[chr14--chr2]"]
HNRNPU--ZBTB18	1	0	1.00	0.00	ONLY_REF_SPLICE	HNRNPU^ENSG00000153187.20	chr1:244863617:-	ZBTB18^ENSG00000179456.10	chr1:244053788:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2282:11023:6095	.	YES_LDAS	0.1007	GT	1.2310	AG	1.8062	["INTRACHROMOSOMAL[chr1:0.78Mb]"]
HNRNPA2B1--NCF1	1	0	0.33	0.00	INCL_NON_REF_SPLICE	HNRNPA2B1^ENSG00000122566.22	chr7:26192013:-	NCF1^ENSG00000158517.15	chr7:74774021:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2220:16228:20018	.	YES_LDAS	0.0332	GT	1.7465	AG	1.8892	["INTRACHROMOSOMAL[chr7:48.57Mb]"]
HNRNPA1--SEPHS1	1	0	1.00	0.00	ONLY_REF_SPLICE	HNRNPA1^ENSG00000135486.19	chr12:54280822:+	SEPHS1^ENSG00000086475.15	chr10:13345028:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2238:6640:2025	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8892	["INTERCHROMOSOMAL[chr12--chr10]"]
HLA-S--HLA-A	1	0	1.00	0.00	ONLY_REF_SPLICE	HLA-S^ENSG00000225851.1	chr6:31382241:-	HLA-A^ENSG00000206503.13	chr6:29945451:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2188:22451:22598	.	YES_LDAS	0.1007	GT	1.9656	AG	1.9656	["GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:1.44Mb]"]
HLA-C--MUC16	1	0	1.00	0.00	INCL_NON_REF_SPLICE	HLA-C^ENSG00000204525.17	chr6:31269489:-	MUC16^ENSG00000181143.15	chr19:8848985:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2269:20528:4877	.	NO_LDAS	0.1007	GT	1.9656	AG	1.8062	["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr6--chr19]"]
HLA-A--WARS1	1	0	0.14	0.00	INCL_NON_REF_SPLICE	HLA-A^ENSG00000206503.13	chr6:29944232:+	WARS1^ENSG00000140105.18	chr14:100342497:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2113:49699:8803	.	YES_LDAS	0.0141	AT	1.7968	AC	1.5329	["INTERCHROMOSOMAL[chr6--chr14]"]
HIPK1-AS1--HECTD4	1	0	1.00	0.00	ONLY_REF_SPLICE	HIPK1-AS1^ENSG00000235527.7	chr1:113928244:-	HECTD4^ENSG00000173064.13	chr12:112219489:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2191:6927:12264	.	YES_LDAS	0.1007	GT	1.9899	AG	1.8892	["INTERCHROMOSOMAL[chr1--chr12]"]
HINT1--DDX18	1	0	1.00	0.00	ONLY_REF_SPLICE	HINT1^ENSG00000169567.13	chr5:131162362:-	DDX18^ENSG00000088205.13	chr2:117830582:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1179:51761:5006	.	YES_LDAS	0.1007	GT	1.6895	AG	1.9219	["INTERCHROMOSOMAL[chr5--chr2]"]
HERC4--PTEN	1	0	1.00	0.00	ONLY_REF_SPLICE	HERC4^ENSG00000148634.16	chr10:68072883:-	PTEN^ENSG00000171862.11	chr10:87925513:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2253:40915:1881	.	NO_LDAS	0.1007	GT	1.4566	AG	1.7465	["INTRACHROMOSOMAL[chr10:19.79Mb]"]
HDLBP--SEPTIN2	1	0	1.00	0.00	ONLY_REF_SPLICE	HDLBP^ENSG00000115677.17	chr2:241233820:-	SEPTIN2^ENSG00000168385.18	chr2:241350073:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2247:12031:16109	.	YES_LDAS	0.1007	GT	1.7819	AG	1.8295	["INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS_OVERLAP:-:+:[1961]"]
HDLBP--MTERF4	1	0	1.00	0.00	ONLY_REF_SPLICE	HDLBP^ENSG00000115677.17	chr2:241315570:-	MTERF4^ENSG00000122085.17	chr2:241097427:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2246:20898:16285	.	YES_LDAS	0.1007	GT	1.6895	AG	1.4295	["INTRACHROMOSOMAL[chr2:0.12Mb]"]
HDAC9--FANCL	1	0	1.00	0.00	ONLY_REF_SPLICE	HDAC9^ENSG00000048052.23	chr7:18585522:+	FANCL^ENSG00000115392.12	chr2:58204226:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1252:40148:1769	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9086	["INTERCHROMOSOMAL[chr7--chr2]"]
HAR1A--HLA-B	1	0	1.00	0.00	INCL_NON_REF_SPLICE	HAR1A^ENSG00000225978.3	chr20:63102300:+	HLA-B^ENSG00000234745.13	chr6:31355592:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2112:12419:15276	.	NO_LDAS	0.1007	GT	1.6895	AG	1.2729	["INTERCHROMOSOMAL[chr20--chr6]"]
H2AZ1--H2AZ2	1	0	0.50	0.00	ONLY_REF_SPLICE	H2AZ1^ENSG00000164032.12	chr4:99949273:-	H2AZ2^ENSG00000105968.19	chr7:44835658:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1293:2914:20435	.	NO_LDAS	0.0504	GT	1.8892	AG	1.8295	["INTERCHROMOSOMAL[chr4--chr7]"]
GTF3C2--EIF2B4	1	0	1.00	0.00	ONLY_REF_SPLICE	GTF3C2^ENSG00000115207.13	chr2:27356087:-	EIF2B4^ENSG00000115211.16	chr2:27364898:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2209:45760:3644	.	YES_LDAS	0.1007	GT	1.4566	AG	1.9656	["INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_REARRANGEMENT:-:[7318]"]
GRK3--DENND1A	1	0	1.00	0.00	ONLY_REF_SPLICE	GRK3^ENSG00000100077.15	chr22:25565153:+	DENND1A^ENSG00000119522.16	chr9:123440491:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1221:28803:12296	.	YES_LDAS	0.1007	GT	1.6895	AG	1.9656	["INTERCHROMOSOMAL[chr22--chr9]"]
GPS2--AC133561.1	1	0	0.33	0.00	INCL_NON_REF_SPLICE	GPS2^ENSG00000132522.16	chr17:7314291:-	AC133561.1^ENSG00000198555.7	chr16:33982613:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2115:32862:5294	.	NO_LDAS	0.0332	GT	1.4295	AG	1.7968	["INTERCHROMOSOMAL[chr17--chr16]"]
GPKOW--NIPBL	1	0	1.00	0.00	INCL_NON_REF_SPLICE	GPKOW^ENSG00000068394.11	chrX:49115891:-	NIPBL^ENSG00000164190.19	chr5:36975922:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1139:37226:20259	.	NO_LDAS	0.1007	GT	1.7465	AG	1.7056	["INTERCHROMOSOMAL[chrX--chr5]"]
GOLGA1--PPP6C	1	0	1.00	0.00	ONLY_REF_SPLICE	GOLGA1^ENSG00000136935.14	chr9:124938577:-	PPP6C^ENSG00000119414.12	chr9:125160906:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2161:49089:17647	.	YES_LDAS	0.1007	GT	1.9329	AG	1.6049	["INTRACHROMOSOMAL[chr9:0.20Mb]"]
GNL3--DCAF1	1	0	1.00	0.00	ONLY_REF_SPLICE	GNL3^ENSG00000163938.17	chr3:52688192:+	DCAF1^ENSG00000145041.15	chr3:51433264:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1166:45150:12488	.	YES_LDAS	0.1007	GT	1.6049	AG	1.7465	["INTRACHROMOSOMAL[chr3:1.18Mb]"]
GNG10--UGCG	1	0	1.00	0.00	ONLY_REF_SPLICE	GNG10^ENSG00000242616.4	chr9:111666946:+	UGCG^ENSG00000148154.10	chr9:111914605:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1165:32354:26171	.	YES_LDAS	0.1007	GT	1.9329	AG	1.7819	["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr9:0.23Mb]"]
GLUD1P3--REV1	1	0	1.00	0.00	ONLY_REF_SPLICE	GLUD1P3^ENSG00000250959.2	chr10:73730873:+	REV1^ENSG00000135945.10	chr2:99421653:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2112:46907:5823	.	YES_LDAS	0.1007	GT	1.2729	AG	1.5656	["INTERCHROMOSOMAL[chr10--chr2]"]
GLE1--DYNC2I2	1	0	1.00	0.00	ONLY_REF_SPLICE	GLE1^ENSG00000119392.15	chr9:128515639:+	DYNC2I2^ENSG00000119333.12	chr9:128640939:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2297:25715:20916	.	YES_LDAS	0.1007	GT	1.4716	AG	1.8892	["INTRACHROMOSOMAL[chr9:0.09Mb]","LOCAL_INVERSION:+:-:[91365]"]
GEN1--HELLS	1	0	1.00	0.00	ONLY_REF_SPLICE	GEN1^ENSG00000178295.15	chr2:17753967:+	HELLS^ENSG00000119969.15	chr10:94574554:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1127:16718:22598	.	YES_LDAS	0.1007	GT	1.6402	AG	1.8256	["INTERCHROMOSOMAL[chr2--chr10]"]
GBF1--NDUFB4	1	0	1.00	0.00	ONLY_REF_SPLICE	GBF1^ENSG00000107862.6	chr10:102370860:+	NDUFB4^ENSG00000065518.8	chr3:120601111:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2292:14518:9267	.	YES_LDAS	0.1007	GT	1.9656	AG	1.9899	["INTERCHROMOSOMAL[chr10--chr3]"]
GART--NUDCD3	1	0	1.00	0.00	ONLY_REF_SPLICE	GART^ENSG00000159131.17	chr21:33532345:-	NUDCD3^ENSG00000015676.18	chr7:44485284:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2283:22469:6896	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7819	["INTERCHROMOSOMAL[chr21--chr7]"]
GARS1-DT--TAF4B	1	0	1.00	0.00	ONLY_REF_SPLICE	GARS1-DT^ENSG00000196295.12	chr7:30550636:-	TAF4B^ENSG00000141384.13	chr18:26357690:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2118:16700:12760	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8892	["INTERCHROMOSOMAL[chr7--chr18]"]
GALNT18--VPS26B	1	0	1.00	0.00	ONLY_REF_SPLICE	GALNT18^ENSG00000110328.6	chr11:11621359:-	VPS26B^ENSG00000151502.11	chr11:134234897:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2143:45418:6063	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8256	["INTRACHROMOSOMAL[chr11:122.60Mb]"]
FXR1--PIBF1	1	0	1.00	0.00	ONLY_REF_SPLICE	FXR1^ENSG00000114416.18	chr3:180970358:+	PIBF1^ENSG00000083535.16	chr13:72998822:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2212:3487:14827	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9086	["INTERCHROMOSOMAL[chr3--chr13]"]
FUBP3--ZBTB43	1	0	1.00	0.00	ONLY_REF_SPLICE	FUBP3^ENSG00000107164.16	chr9:130579764:+	ZBTB43^ENSG00000169155.10	chr9:126832487:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2184:51743:9972	.	YES_LDAS	0.1007	GT	1.7056	AG	1.8892	["INTRACHROMOSOMAL[chr9:3.74Mb]"]
FTSJ3--ANO6	1	0	1.00	0.00	INCL_NON_REF_SPLICE	FTSJ3^ENSG00000108592.17	chr17:63821379:-	ANO6^ENSG00000177119.17	chr12:45388229:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2157:17412:25242	.	NO_LDAS	0.1007	GT	1.8892	AG	1.7968	["INTERCHROMOSOMAL[chr17--chr12]"]
FTH1--DHX57	1	0	1.00	0.00	ONLY_REF_SPLICE	FTH1^ENSG00000167996.16	chr11:61967312:-	DHX57^ENSG00000163214.21	chr2:38806693:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2275:14111:8306	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7465	["INTERCHROMOSOMAL[chr11--chr2]"]
FRMPD3--EIF2B3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	FRMPD3^ENSG00000147234.10	chrX:107604311:+	EIF2B3^ENSG00000070785.17	chr1:44941592:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1149:21767:3596	.	NO_LDAS	0.1007	GT	1.1589	AG	1.9329	["INTERCHROMOSOMAL[chrX--chr1]"]
FOXRED1--DNPEP	1	0	1.00	0.00	ONLY_REF_SPLICE	FOXRED1^ENSG00000110074.11	chr11:126271657:+	DNPEP^ENSG00000123992.20	chr2:219384443:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1290:21748:22566	.	YES_LDAS	0.1007	GT	1.5850	AG	1.5058	["INTERCHROMOSOMAL[chr11--chr2]"]
FNBP1--SURF4	1	0	1.00	0.00	ONLY_REF_SPLICE	FNBP1^ENSG00000187239.17	chr9:129899965:-	SURF4^ENSG00000148248.14	chr9:133367445:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2143:49838:15548	.	YES_LDAS	0.1007	GT	1.9086	AG	1.8323	["INTRACHROMOSOMAL[chr9:3.32Mb]"]
FNBP1--LNX2	1	0	1.00	0.00	ONLY_REF_SPLICE	FNBP1^ENSG00000187239.17	chr9:129924960:-	LNX2^ENSG00000139517.9	chr13:27606771:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2110:23921:10245	.	YES_LDAS	0.1007	GT	1.2366	AG	1.7465	["INTERCHROMOSOMAL[chr9--chr13]"]
FLYWCH1--SFI1	1	0	1.00	0.00	ONLY_REF_SPLICE	FLYWCH1^ENSG00000059122.17	chr16:2940092:+	SFI1^ENSG00000198089.16	chr22:31580272:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2114:10163:25562	.	NO_LDAS	0.1007	GT	1.9899	AG	1.5546	["INTERCHROMOSOMAL[chr16--chr22]"]
FHOD3--SLC39A6	1	0	1.00	0.00	ONLY_REF_SPLICE	FHOD3^ENSG00000134775.15	chr18:36576545:+	SLC39A6^ENSG00000141424.13	chr18:36116779:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2227:5327:21797	.	YES_LDAS	0.1007	GT	1.9899	AG	1.7232	["INTRACHROMOSOMAL[chr18:0.17Mb]"]
FGGY--HOOK1	1	0	1.00	0.00	ONLY_REF_SPLICE	FGGY^ENSG00000172456.18	chr1:59321750:+	HOOK1^ENSG00000134709.12	chr1:59821858:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1277:40250:6047	.	YES_LDAS	0.1007	GT	1.9329	AG	1.9329	["TCGA_StarF2019","INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS[4139]"]
FCHSD2--RAB12	1	0	1.00	0.00	ONLY_REF_SPLICE	FCHSD2^ENSG00000137478.15	chr11:73083695:-	RAB12^ENSG00000206418.4	chr18:8624938:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1141:3182:7729	.	YES_LDAS	0.1007	GT	1.8323	AG	1.9086	["INTERCHROMOSOMAL[chr11--chr18]"]
FBXW7--ACTN1	1	0	0.33	0.00	INCL_NON_REF_SPLICE	FBXW7^ENSG00000109670.16	chr4:152411303:-	ACTN1^ENSG00000072110.15	chr14:68887958:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1103:12585:25947	.	YES_LDAS	0.0332	GT	0.7219	AG	1.8892	["INTERCHROMOSOMAL[chr4--chr14]"]
FBXO25--SEPTIN14	1	0	1.00	0.00	ONLY_REF_SPLICE	FBXO25^ENSG00000147364.17	chr8:435707:+	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2228:11457:16141	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9899	["INTERCHROMOSOMAL[chr8--chr7]"]
FASTKD3--MARCHF6	1	0	1.00	0.00	ONLY_REF_SPLICE	FASTKD3^ENSG00000124279.12	chr5:7868979:-	MARCHF6^ENSG00000145495.16	chr5:10433594:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1236:31521:22294	.	YES_LDAS	0.1007	GT	1.4295	AG	1.9086	["INTRACHROMOSOMAL[chr5:2.48Mb]"]
FAM193A--PRICKLE3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	FAM193A^ENSG00000125386.16	chr4:2646832:+	PRICKLE3^ENSG00000012211.13	chrX:49175286:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2267:22497:22101	.	NO_LDAS	0.1007	GT	1.9656	AG	1.8892	["INTERCHROMOSOMAL[chr4--chrX]"]
FAM133B--ANKIB1	1	0	1.00	0.00	ONLY_REF_SPLICE	FAM133B^ENSG00000234545.8	chr7:92590268:-	ANKIB1^ENSG00000001629.10	chr7:92294889:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1264:2683:29391	.	YES_LDAS	0.1007	GT	1.8295	AG	1.5656	["INTRACHROMOSOMAL[chr7:0.16Mb]"]
FAM107B--CELF2	1	0	1.00	0.00	ONLY_REF_SPLICE	FAM107B^ENSG00000065809.14	chr10:14604240:-	CELF2^ENSG00000048740.18	chr10:11314139:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2229:50060:19586	.	YES_LDAS	0.1007	GT	1.6895	AG	1.8892	["INTRACHROMOSOMAL[chr10:3.18Mb]"]
FAF1--CMC2	1	0	1.00	0.00	ONLY_REF_SPLICE	FAF1^ENSG00000185104.20	chr1:50959767:-	CMC2^ENSG00000103121.9	chr16:80981877:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1216:29691:3836	.	YES_LDAS	0.1007	GT	1.9086	AG	1.7465	["INTERCHROMOSOMAL[chr1--chr16]"]
EXOSC7--ACTL7B	1	0	1.00	0.00	INCL_NON_REF_SPLICE	EXOSC7^ENSG00000075914.13	chr3:45011393:+	ACTL7B^ENSG00000148156.8	chr9:108854803:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2282:28063:6816	.	NO_LDAS	0.1007	GT	1.7465	AG	1.9656	["INTERCHROMOSOMAL[chr3--chr9]"]
EXOC2--DOK3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	EXOC2^ENSG00000112685.14	chr6:629856:-	DOK3^ENSG00000146094.16	chr5:177504002:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1181:15618:7201	.	NO_LDAS	0.1007	GC	1.8295	AG	1.7465	["INTERCHROMOSOMAL[chr6--chr5]"]
ERV3-1--CHASERR	1	0	1.00	0.00	ONLY_REF_SPLICE	ERV3-1^ENSG00000213462.5	chr7:65006541:-	CHASERR^ENSG00000272888.7	chr15:92885515:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1260:25253:9187	.	YES_LDAS	0.1007	GT	1.8323	AG	1.8256	["INTERCHROMOSOMAL[chr7--chr15]"]
ERO1A--OVOL2	1	0	1.00	0.00	ONLY_REF_SPLICE	ERO1A^ENSG00000197930.13	chr14:52682325:-	OVOL2^ENSG00000125850.11	chr20:17957037:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1245:31706:2298	.	YES_LDAS	0.1007	GT	1.8062	AG	1.9219	["INTERCHROMOSOMAL[chr14--chr20]"]
EPSTI1--HP1BP3	1	0	1.00	0.00	ONLY_REF_SPLICE	EPSTI1^ENSG00000133106.15	chr13:42991978:-	HP1BP3^ENSG00000127483.19	chr1:20773610:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2187:8637:18080	.	YES_LDAS	0.1007	GT	1.3996	AG	1.8892	["INTERCHROMOSOMAL[chr13--chr1]"]
EPM2AIP1--CDV3	1	0	1.00	0.00	ONLY_REF_SPLICE	EPM2AIP1^ENSG00000178567.8	chr3:36992878:-	CDV3^ENSG00000091527.16	chr3:133584002:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2205:28785:17968	.	NO_LDAS	0.1007	GT	1.9329	AG	1.5329	["INTRACHROMOSOMAL[chr3:96.58Mb]"]
EPG5--RIPOR2	1	0	0.50	0.00	INCL_NON_REF_SPLICE	EPG5^ENSG00000152223.15	chr18:45934809:-	RIPOR2^ENSG00000111913.20	chr6:24830523:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2120:37171:1160	.	NO_LDAS	0.0504	GT	1.8256	AG	1.9329	["INTERCHROMOSOMAL[chr18--chr6]"]
EPG5--OR2D3	1	0	0.50	0.00	INCL_NON_REF_SPLICE	EPG5^ENSG00000152223.15	chr18:45934809:-	OR2D3^ENSG00000178358.4	chr11:6921107:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2120:37171:1160	.	NO_LDAS	0.0504	GT	1.8256	AG	1.9329	["INTERCHROMOSOMAL[chr18--chr11]"]
ENTPD1-AS1--LRBA	1	0	1.00	0.00	ONLY_REF_SPLICE	ENTPD1-AS1^ENSG00000226688.7	chr10:95904830:-	LRBA^ENSG00000198589.14	chr4:150415590:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2290:19085:3820	.	YES_LDAS	0.1007	GT	1.9086	AG	1.9899	["INTERCHROMOSOMAL[chr10--chr4]"]
ENTPD1--PTP4A2	1	0	1.00	0.00	ONLY_REF_SPLICE	ENTPD1^ENSG00000138185.20	chr10:95823364:+	PTP4A2^ENSG00000184007.22	chr1:31919658:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1160:16053:6800	.	YES_LDAS	0.1007	GT	1.8295	AG	1.6402	["INTERCHROMOSOMAL[chr10--chr1]"]
EMB--MTREX	1	0	1.00	0.00	ONLY_REF_SPLICE	EMB^ENSG00000170571.12	chr5:50441040:-	MTREX^ENSG00000039123.16	chr5:55366725:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1118:47314:1849	.	YES_LDAS	0.1007	GT	1.7819	AG	1.8062	["INTRACHROMOSOMAL[chr5:4.86Mb]"]
ELP6--PTPN23	1	0	1.00	0.00	ONLY_REF_SPLICE	ELP6^ENSG00000163832.16	chr3:47513537:-	PTPN23^ENSG00000076201.15	chr3:47396143:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1103:47462:27485	.	YES_LDAS	0.1007	GT	1.4566	AG	1.8892	["CCLE_StarF2019","INTRACHROMOSOMAL[chr3:0.08Mb]","LOCAL_INVERSION:-:+:[82205]"]
ELMOD3--SNRPA	1	0	1.00	0.00	INCL_NON_REF_SPLICE	ELMOD3^ENSG00000115459.18	chr2:85355896:+	SNRPA^ENSG00000077312.9	chr19:40751424:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1195:50402:22486	.	NO_LDAS	0.1007	GT	1.5850	AG	1.4716	["HGNC_GENEFAM","INTERCHROMOSOMAL[chr2--chr19]"]
ELMO1--AOAH	1	0	1.00	0.00	ONLY_REF_SPLICE	ELMO1^ENSG00000155849.16	chr7:36861659:-	AOAH^ENSG00000136250.12	chr7:36686794:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2278:45714:16317	.	YES_LDAS	0.1007	GT	1.9329	AG	1.2310	["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.13Mb]"]
ELMO1--AOAH	1	0	1.00	0.00	ONLY_REF_SPLICE	ELMO1^ENSG00000155849.16	chr7:36861659:-	AOAH^ENSG00000136250.12	chr7:36674009:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2184:33777:21364	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8323	["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.13Mb]"]
EIF5B--NRXN3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	EIF5B^ENSG00000158417.11	chr2:99337599:+	NRXN3^ENSG00000021645.20	chr14:79861935:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1230:41970:12200	.	NO_LDAS	0.1007	GT	1.6895	AG	1.3383	["INTERCHROMOSOMAL[chr2--chr14]"]
EIF4G2--TPT1-AS1	1	0	1.00	0.00	ONLY_REF_SPLICE	EIF4G2^ENSG00000110321.19	chr11:10805907:-	TPT1-AS1^ENSG00000170919.16	chr13:45369959:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2259:51308:25498	.	YES_LDAS	0.1007	GT	1.5628	AG	1.6729	["INTERCHROMOSOMAL[chr11--chr13]"]
EIF3CL--GLYR1	1	0	1.00	0.00	ONLY_REF_SPLICE	EIF3CL^ENSG00000205609.13	chr16:28399871:-	GLYR1^ENSG00000140632.17	chr16:4832912:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1226:25373:20066	.	YES_LDAS	0.1007	GT	1.5329	AG	1.9899	["INTRACHROMOSOMAL[chr16:23.53Mb]"]
EHD1--CLPX	1	0	1.00	0.00	ONLY_REF_SPLICE	EHD1^ENSG00000110047.18	chr11:64874421:-	CLPX^ENSG00000166855.9	chr15:65166785:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2126:4495:12632	.	YES_LDAS	0.1007	GT	1.7819	AG	1.8323	["INTERCHROMOSOMAL[chr11--chr15]"]
EGR3--PWWP3A	1	0	1.00	0.00	INCL_NON_REF_SPLICE	EGR3^ENSG00000179388.9	chr8:22693357:-	PWWP3A^ENSG00000160953.17	chr19:1356324:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2153:35812:7841	.	YES_LDAS	0.1007	GT	1.2419	AG	1.9656	["INTERCHROMOSOMAL[chr8--chr19]"]
EDF1--GAPDH	1	0	0.10	0.00	INCL_NON_REF_SPLICE	EDF1^ENSG00000107223.13	chr9:136866196:-	GAPDH^ENSG00000111640.15	chr12:6537614:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2270:50347:4220	.	NO_LDAS	0.0101	GC	1.6402	AG	1.8892	["INTERCHROMOSOMAL[chr9--chr12]"]
DTNBP1--XRN2	1	0	1.00	0.00	ONLY_REF_SPLICE	DTNBP1^ENSG00000047579.20	chr6:15662814:-	XRN2^ENSG00000088930.8	chr20:21386868:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1104:3681:4172	.	YES_LDAS	0.1007	GT	1.9329	AG	1.7232	["INTERCHROMOSOMAL[chr6--chr20]"]
DRAM1--MREG	1	0	1.00	0.00	ONLY_REF_SPLICE	DRAM1^ENSG00000136048.14	chr12:101890221:+	MREG^ENSG00000118242.16	chr2:215996465:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2225:39963:22310	.	NO_LDAS	0.1007	GT	1.9329	AG	1.7465	["INTERCHROMOSOMAL[chr12--chr2]"]
DR1--FNBP1L	1	0	1.00	0.00	ONLY_REF_SPLICE	DR1^ENSG00000117505.13	chr1:93354071:+	FNBP1L^ENSG00000137942.18	chr1:93499468:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1286:37846:2971	.	YES_LDAS	0.1007	GT	1.6895	AG	1.9899	["INTRACHROMOSOMAL[chr1:0.08Mb]","NEIGHBORS[78625]"]
DOCK8--DOCK6	1	0	1.00	0.00	ONLY_REF_SPLICE	DOCK8^ENSG00000107099.16	chr9:379935:+	DOCK6^ENSG00000130158.14	chr19:11245878:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2164:13963:13049	.	NO_LDAS	0.1007	GT	1.9899	AG	1.8256	["INTERCHROMOSOMAL[chr9--chr19]"]
DNAI4--FAM78A	1	0	1.00	0.00	ONLY_REF_SPLICE	DNAI4^ENSG00000152763.17	chr1:66924662:-	FAM78A^ENSG00000126882.13	chr9:131261350:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1294:6585:7217	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8892	["INTERCHROMOSOMAL[chr1--chr9]"]
DLGAP1--EXOC4	1	0	1.00	0.00	ONLY_REF_SPLICE	DLGAP1^ENSG00000170579.17	chr18:4151180:-	EXOC4^ENSG00000131558.15	chr7:133630045:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1254:28137:3483	.	YES_LDAS	0.1007	GT	1.6402	AG	1.9219	["INTERCHROMOSOMAL[chr18--chr7]"]
DIAPH3--PKN2	1	0	1.00	0.00	ONLY_REF_SPLICE	DIAPH3^ENSG00000139734.19	chr13:60015913:-	PKN2^ENSG00000065243.20	chr1:88813557:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2108:42709:5054	.	NO_LDAS	0.1007	GT	1.9656	AG	1.9329	["INTERCHROMOSOMAL[chr13--chr1]"]
DGKZ--SHARPIN	1	0	1.00	0.00	ONLY_REF_SPLICE	DGKZ^ENSG00000149091.15	chr11:46345585:+	SHARPIN^ENSG00000179526.17	chr8:144103225:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2205:37513:5598	.	YES_LDAS	0.1007	GT	1.5058	AG	1.5219	["INTERCHROMOSOMAL[chr11--chr8]"]
DGKD--ITPR2	1	0	1.00	0.00	ONLY_REF_SPLICE	DGKD^ENSG00000077044.11	chr2:233446796:+	ITPR2^ENSG00000123104.12	chr12:26655852:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1163:29894:16718	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7056	["INTERCHROMOSOMAL[chr2--chr12]"]
DGKD--DHX34	1	0	1.00	0.00	ONLY_REF_SPLICE	DGKD^ENSG00000077044.11	chr2:233441995:+	DHX34^ENSG00000134815.19	chr19:47379710:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1149:24060:3724	.	NO_LDAS	0.1007	GT	1.7465	AG	1.2729	["INTERCHROMOSOMAL[chr2--chr19]"]
DENND4B--PHC1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	DENND4B^ENSG00000198837.10	chr1:153934797:-	PHC1^ENSG00000111752.11	chr12:8932733:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1204:5207:7809	.	YES_LDAS	0.0504	GT	1.5656	AG	1.5656	["INTERCHROMOSOMAL[chr1--chr12]"]
DDX17--ITPRID2	1	0	1.00	0.00	ONLY_REF_SPLICE	DDX17^ENSG00000100201.23	chr22:38501130:-	ITPRID2^ENSG00000138434.17	chr2:181921948:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2164:51835:23848	.	YES_LDAS	0.1007	GT	1.8256	AG	1.9899	["INTERCHROMOSOMAL[chr22--chr2]"]
DCXR--NUMA1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	DCXR^ENSG00000169738.8	chr17:82036969:-	NUMA1^ENSG00000137497.18	chr11:72014879:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2114:27028:16974	.	YES_LDAS	0.1007	GC	1.7232	AG	1.9219	["INTERCHROMOSOMAL[chr17--chr11]"]
DCUN1D4--AL445363.1	1	0	0.50	0.00	INCL_NON_REF_SPLICE	DCUN1D4^ENSG00000109184.15	chr4:51843712:+	AL445363.1^ENSG00000259002.2	chr14:34546139:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1261:32030:29391	.	YES_LDAS	0.0504	GT	1.9899	AG	1.5058	["INTERCHROMOSOMAL[chr4--chr14]"]
DBF4--LUC7L2	1	0	1.00	0.00	ONLY_REF_SPLICE	DBF4^ENSG00000006634.8	chr7:87878133:+	LUC7L2^ENSG00000146963.18	chr7:139376062:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2289:6557:14347	.	YES_LDAS	0.1007	GT	1.5546	AG	1.9656	["INTRACHROMOSOMAL[chr7:51.43Mb]"]
CUTA--ATG2B	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CUTA^ENSG00000112514.18	chr6:33417634:-	ATG2B^ENSG00000066739.12	chr14:96363042:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2165:26149:15068	.	NO_LDAS	0.1007	GT	1.5058	AG	1.7968	["INTERCHROMOSOMAL[chr6--chr14]"]
CU633906.2--IKZF3	1	0	0.25	0.00	ONLY_REF_SPLICE	CU633906.2^ENSG00000278903.3	chr21:6318604:+	IKZF3^ENSG00000161405.17	chr17:39792933:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1155:49283:26187	.	NO_LDAS	0.0252	GT	1.6895	AG	1.7465	["INTERCHROMOSOMAL[chr21--chr17]"]
CTSC--RAB38	1	0	1.00	0.00	ONLY_REF_SPLICE	CTSC^ENSG00000109861.17	chr11:88300530:-	RAB38^ENSG00000123892.12	chr11:88149955:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2153:47138:17759	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8062	["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[89626]"]
CTSC--RAB38	1	0	1.00	0.00	ONLY_REF_SPLICE	CTSC^ENSG00000109861.17	chr11:88290402:-	RAB38^ENSG00000123892.12	chr11:88149955:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2233:30264:20403	.	NO_LDAS	0.1007	GT	1.6402	AG	1.8062	["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[89626]"]
CREBZF--HIKESHI	1	0	1.00	0.00	ONLY_REF_SPLICE	CREBZF^ENSG00000137504.14	chr11:85663815:-	HIKESHI^ENSG00000149196.16	chr11:86337379:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2203:21721:17423	.	YES_LDAS	0.1007	GT	1.7465	AG	1.5058	["INTRACHROMOSOMAL[chr11:0.62Mb]"]
CPT1B--AC103760.1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CPT1B^ENSG00000205560.13	chr22:50571154:-	AC103760.1^ENSG00000254231.3	chr8:86333992:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1285:23727:2762	.	NO_LDAS	0.1007	GT	1.9086	AG	1.8256	["INTERCHROMOSOMAL[chr22--chr8]"]
CPSF6--ITPR2	1	0	1.00	0.00	ONLY_REF_SPLICE	CPSF6^ENSG00000111605.18	chr12:69262562:+	ITPR2^ENSG00000123104.12	chr12:26655852:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1215:19363:8787	.	YES_LDAS	0.1007	GT	1.9899	AG	1.7056	["INTRACHROMOSOMAL[chr12:42.41Mb]"]
COX8A--PEX6	1	0	1.00	0.00	ONLY_REF_SPLICE	COX8A^ENSG00000176340.4	chr11:63974794:+	PEX6^ENSG00000124587.14	chr6:42975038:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2232:49967:10165	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8892	["INTERCHROMOSOMAL[chr11--chr6]"]
COX15--DACH2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	COX15^ENSG00000014919.13	chr10:99720848:-	DACH2^ENSG00000126733.21	chrX:86830028:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2193:46916:4397	.	NO_LDAS	0.1007	GT	1.3383	AG	1.3996	["INTERCHROMOSOMAL[chr10--chrX]"]
CORO7--CLEC16A	1	0	1.00	0.00	ONLY_REF_SPLICE	CORO7^ENSG00000262246.6	chr16:4416459:-	CLEC16A^ENSG00000038532.16	chr16:11003074:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1262:26732:21717	.	YES_LDAS	0.1007	GT	1.2310	AG	1.8892	["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr16:6.52Mb]"]
COMMD1--STX18	1	0	1.00	0.00	ONLY_REF_SPLICE	COMMD1^ENSG00000173163.10	chr2:62000982:+	STX18^ENSG00000168818.10	chr4:4471706:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1283:33694:17919	.	YES_LDAS	0.1007	GT	1.8323	AG	1.8892	["INTERCHROMOSOMAL[chr2--chr4]"]
CNOT6--RBM27	1	0	1.00	0.00	ONLY_REF_SPLICE	CNOT6^ENSG00000113300.13	chr5:180571432:+	RBM27^ENSG00000091009.8	chr5:146251711:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1257:49607:21909	.	YES_LDAS	0.1007	GT	1.8323	AG	1.9656	["INTRACHROMOSOMAL[chr5:34.21Mb]"]
CNOT2--RAB3IP	1	0	1.00	0.00	ONLY_REF_SPLICE	CNOT2^ENSG00000111596.14	chr12:70278274:+	RAB3IP^ENSG00000127328.22	chr12:69784720:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2177:12077:16317	.	YES_LDAS	0.1007	GT	1.5546	AG	1.6729	["YOSHIHARA_TCGA","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr12:0.42Mb]"]
CNOT1--IFI16	1	0	1.00	0.00	ONLY_REF_SPLICE	CNOT1^ENSG00000125107.19	chr16:58549719:-	IFI16^ENSG00000163565.19	chr1:159010003:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2153:9488:16574	.	YES_LDAS	0.1007	GT	1.5546	AG	1.3710	["INTERCHROMOSOMAL[chr16--chr1]"]
CLNK--RBM18	1	0	1.00	0.00	ONLY_REF_SPLICE	CLNK^ENSG00000109684.15	chr4:10501256:-	RBM18^ENSG00000119446.14	chr9:122242043:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2274:31679:7441	.	YES_LDAS	0.1007	GT	1.8323	AG	1.9656	["INTERCHROMOSOMAL[chr4--chr9]"]
CLIP1--KNTC1	1	0	1.00	0.00	ONLY_REF_SPLICE	CLIP1^ENSG00000130779.22	chr12:122360959:-	KNTC1^ENSG00000184445.12	chr12:122534664:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1274:37032:5246	.	YES_LDAS	0.1007	GT	1.9086	AG	1.8256	["ChimerSeq","INTRACHROMOSOMAL[chr12:0.10Mb]"]
CLIC2--RMDN1	1	0	1.00	0.00	ONLY_REF_SPLICE	CLIC2^ENSG00000155962.13	chrX:155334371:-	RMDN1^ENSG00000176623.12	chr8:86507112:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1185:16127:21540	.	YES_LDAS	0.1007	GT	1.8062	AG	1.8892	["INTERCHROMOSOMAL[chrX--chr8]"]
CLEC2D--KLRG1	1	0	1.00	0.00	ONLY_REF_SPLICE	CLEC2D^ENSG00000069493.15	chr12:9669795:+	KLRG1^ENSG00000139187.10	chr12:9008975:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2218:1629:10774	.	NO_LDAS	0.1007	GT	1.8892	AG	1.9656	["HGNC_GENEFAM","INTRACHROMOSOMAL[chr12:0.65Mb]"]
CLEC16A--IL21R	1	0	1.00	0.00	ONLY_REF_SPLICE	CLEC16A^ENSG00000038532.16	chr16:11061022:+	IL21R^ENSG00000103522.16	chr16:27430056:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1216:5965:10341	.	YES_LDAS	0.1007	GT	1.9656	AG	1.7968	["INTRACHROMOSOMAL[chr16:16.22Mb]"]
CILP--PRMT5	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CILP^ENSG00000138615.6	chr15:65194855:-	PRMT5^ENSG00000100462.16	chr14:22924094:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2127:29857:3003	.	YES_LDAS	0.1007	GT	0.9056	AG	1.9656	["INTERCHROMOSOMAL[chr15--chr14]"]
CHST11--MME	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CHST11^ENSG00000171310.11	chr12:104601991:+	MME^ENSG00000196549.13	chr3:155183570:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2151:36348:2490	.	NO_LDAS	0.1007	GT	1.7056	AG	1.9656	["INTERCHROMOSOMAL[chr12--chr3]"]
CHMP3--FSBP	1	0	1.00	0.00	ONLY_REF_SPLICE	CHMP3^ENSG00000115561.16	chr2:86563304:-	FSBP^ENSG00000265817.4	chr8:94380406:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1156:17024:7809	.	YES_LDAS	0.1007	GT	1.7819	AG	1.5628	["INTERCHROMOSOMAL[chr2--chr8]"]
CHCHD3--EXOC4	1	0	1.00	0.00	ONLY_REF_SPLICE	CHCHD3^ENSG00000106554.13	chr7:133070142:-	EXOC4^ENSG00000131558.15	chr7:133274982:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1116:30773:22149	.	YES_LDAS	0.1007	GT	1.9329	AG	1.9656	["Klijn_CellLines","DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.17Mb]"]
CERS6--EPC2	1	0	1.00	0.00	ONLY_REF_SPLICE	CERS6^ENSG00000172292.15	chr2:168456618:+	EPC2^ENSG00000135999.12	chr2:148690214:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2292:40777:20803	.	NO_LDAS	0.1007	GT	1.9899	AG	1.8892	["INTRACHROMOSOMAL[chr2:19.67Mb]"]
CDKN1A--VDAC1	1	0	1.00	0.00	ONLY_REF_SPLICE	CDKN1A^ENSG00000124762.14	chr6:36678798:+	VDAC1^ENSG00000213585.11	chr5:133993015:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2131:39279:21284	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9656	["INTERCHROMOSOMAL[chr6--chr5]"]
CDK6--CDK14	1	0	1.00	0.00	ONLY_REF_SPLICE	CDK6^ENSG00000105810.10	chr7:92725626:-	CDK14^ENSG00000058091.17	chr7:90899291:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2134:14019:3564	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8892	["HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:1.39Mb]"]
CD79A--NIPA2	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CD79A^ENSG00000105369.10	chr19:41877383:+	NIPA2^ENSG00000140157.16	chr15:22838776:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1262:36117:24457	.	YES_LDAS	0.1007	GT	1.8256	AG	1.8295	["INTERCHROMOSOMAL[chr19--chr15]"]
CD74--CYSTM1	1	0	1.00	0.00	ONLY_REF_SPLICE	CD74^ENSG00000019582.16	chr5:150412625:-	CYSTM1^ENSG00000120306.11	chr5:140194446:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1106:29829:1577	.	YES_LDAS	0.1007	GT	1.6402	AG	1.9656	["INTRACHROMOSOMAL[chr5:10.12Mb]"]
CCT5--SUB1	1	0	1.00	0.00	ONLY_REF_SPLICE	CCT5^ENSG00000150753.12	chr5:10250445:+	SUB1^ENSG00000113387.12	chr5:32598961:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2258:7223:11206	.	YES_LDAS	0.1007	GT	1.9656	AG	1.5219	["INTRACHROMOSOMAL[chr5:22.27Mb]"]
CCT5--RBM33	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CCT5^ENSG00000150753.12	chr5:10264787:+	RBM33^ENSG00000184863.11	chr7:155680816:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1174:4985:26171	.	YES_LDAS	0.1007	AT	1.7968	AC	1.7465	["INTERCHROMOSOMAL[chr5--chr7]"]
CCT4--TRIM22	1	0	1.00	0.00	ONLY_REF_SPLICE	CCT4^ENSG00000115484.15	chr2:61885020:-	TRIM22^ENSG00000132274.16	chr11:5698315:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1208:51502:23335	.	NO_LDAS	0.1007	GT	1.5058	AG	1.7819	["INTERCHROMOSOMAL[chr2--chr11]"]
CCSAP--STT3B	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CCSAP^ENSG00000154429.11	chr1:229341706:-	STT3B^ENSG00000163527.10	chr3:31629298:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2242:32807:11382	.	NO_LDAS	0.1007	GT	1.8892	AG	1.7819	["INTERCHROMOSOMAL[chr1--chr3]"]
CCDC88B--SLC35A3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CCDC88B^ENSG00000168071.22	chr11:64351311:+	SLC35A3^ENSG00000117620.15	chr1:99970560:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1258:35728:13882	.	NO_LDAS	0.1007	GT	1.6402	AG	1.9086	["INTERCHROMOSOMAL[chr11--chr1]"]
CCDC88B--MYO18B	1	0	0.17	0.00	INCL_NON_REF_SPLICE	CCDC88B^ENSG00000168071.22	chr11:64353459:+	MYO18B^ENSG00000133454.16	chr22:25846102:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2208:45344:18913	.	NO_LDAS	0.0171	GT	1.8062	AG	1.8295	["INTERCHROMOSOMAL[chr11--chr22]"]
CCDC7--PICALM	1	0	1.00	0.00	ONLY_REF_SPLICE	CCDC7^ENSG00000216937.13	chr10:32474023:+	PICALM^ENSG00000073921.18	chr11:86031611:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1164:26418:10117	.	YES_LDAS	0.1007	GT	1.7056	AG	1.9086	["INTERCHROMOSOMAL[chr10--chr11]"]
CCDC174--UBAP2L	1	0	1.00	0.00	INCL_NON_REF_SPLICE	CCDC174^ENSG00000154781.16	chr3:14672048:+	UBAP2L^ENSG00000143569.19	chr1:154261089:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1166:4948:14250	.	NO_LDAS	0.1007	GT	1.2419	AG	1.7819	["INTERCHROMOSOMAL[chr3--chr1]"]
CBX5--SERINC2	1	0	1.00	0.00	ONLY_REF_SPLICE	CBX5^ENSG00000094916.16	chr12:54280008:-	SERINC2^ENSG00000168528.12	chr1:31432967:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2261:37134:25866	.	NO_LDAS	0.1007	GT	1.8295	AG	1.8892	["INTERCHROMOSOMAL[chr12--chr1]"]
CBFA2T3--ACSF3	1	0	1.00	0.00	ONLY_REF_SPLICE	CBFA2T3^ENSG00000129993.15	chr16:88976657:-	ACSF3^ENSG00000176715.17	chr16:89100662:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1159:36746:3339	.	YES_LDAS	0.1007	GT	1.4566	AG	1.7465	["DEEPEST2019","ChimerPub","TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr16:0.11Mb]"]
CAPZB--MICOS10P2	1	0	0.50	0.00	INCL_NON_REF_SPLICE	CAPZB^ENSG00000077549.19	chr1:19485436:-	MICOS10P2^ENSG00000270714.1	chr17:64747428:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2146:26639:21300	.	NO_LDAS	0.0504	GT	1.6402	AG	1.6895	["INTERCHROMOSOMAL[chr1--chr17]"]
CAMK1D--PTER	1	0	1.00	0.00	ONLY_REF_SPLICE	CAMK1D^ENSG00000183049.13	chr10:12769799:+	PTER^ENSG00000165983.15	chr10:16511046:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2210:28313:24969	.	YES_LDAS	0.1007	GT	1.9329	AG	1.5656	["INTRACHROMOSOMAL[chr10:3.60Mb]"]
CALCOCO1--GOLGA3	1	0	1.00	0.00	ONLY_REF_SPLICE	CALCOCO1^ENSG00000012822.16	chr12:53724645:-	GOLGA3^ENSG00000090615.15	chr12:132777805:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2113:13307:9956	.	YES_LDAS	0.1007	GT	1.9899	AG	1.8892	["INTRACHROMOSOMAL[chr12:79.04Mb]"]
C5orf63--PHAX	1	0	1.00	0.00	ONLY_REF_SPLICE	C5orf63^ENSG00000164241.13	chr5:127058882:-	PHAX^ENSG00000164902.14	chr5:126617250:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2224:36903:27645	.	YES_LDAS	0.1007	GT	1.8062	AG	1.7819	["INTRACHROMOSOMAL[chr5:0.42Mb]"]
BX571818.1--TMEM200A	1	0	1.00	0.00	ONLY_REF_SPLICE	BX571818.1^ENSG00000285417.1	chr1:206053265:+	TMEM200A^ENSG00000164484.12	chr6:130440407:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1146:36635:4909	.	NO_LDAS	0.1007	GT	1.9656	AG	1.7465	["INTERCHROMOSOMAL[chr1--chr6]"]
BTG2--KARS1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	BTG2^ENSG00000159388.6	chr1:203308139:+	KARS1^ENSG00000065427.15	chr16:75641634:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2242:1120:10021	.	NO_LDAS	0.1007	GT	1.5329	AG	1.8295	["INTERCHROMOSOMAL[chr1--chr16]"]
BRI3BP--UBC	1	0	1.00	0.00	ONLY_REF_SPLICE	BRI3BP^ENSG00000184992.13	chr12:124994003:+	UBC^ENSG00000150991.15	chr12:124913774:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1155:36339:21444	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9329	["ChimerSeq","INTRACHROMOSOMAL[chr12:0.08Mb]","LOCAL_INVERSION:+:-:[76277]"]
BOLA2--ZRANB2-AS2	1	0	0.50	0.00	INCL_NON_REF_SPLICE	BOLA2^ENSG00000183336.8	chr16:29454016:-	ZRANB2-AS2^ENSG00000229956.11	chr1:71238144:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1291:48164:17070	.	YES_LDAS	0.0504	GT	1.9329	AG	1.8892	["INTERCHROMOSOMAL[chr16--chr1]"]
BLCAP--DCTD	1	0	1.00	0.00	ONLY_REF_SPLICE	BLCAP^ENSG00000166619.15	chr20:37527793:-	DCTD^ENSG00000129187.15	chr4:182915575:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2144:11679:3836	.	YES_LDAS	0.1007	GT	1.8295	AG	1.8892	["INTERCHROMOSOMAL[chr20--chr4]"]
BIRC6--DIS3L2	1	0	1.00	0.00	ONLY_REF_SPLICE	BIRC6^ENSG00000115760.14	chr2:32357486:+	DIS3L2^ENSG00000144535.20	chr2:232014835:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1279:16312:12504	.	YES_LDAS	0.1007	GT	1.7465	AG	1.7465	["INTRACHROMOSOMAL[chr2:199.34Mb]"]
BICRAL--ZSWIM7	1	0	1.00	0.00	ONLY_REF_SPLICE	BICRAL^ENSG00000112624.12	chr6:42782101:+	ZSWIM7^ENSG00000214941.8	chr17:15987368:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2156:33269:21733	.	YES_LDAS	0.1007	GT	1.8295	AG	1.8295	["INTERCHROMOSOMAL[chr6--chr17]"]
BAZ1A--BAZ1B	1	0	1.00	0.00	ONLY_REF_SPLICE	BAZ1A^ENSG00000198604.11	chr14:34792775:-	BAZ1B^ENSG00000009954.11	chr7:73470483:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2227:29376:25850	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9329	["HGNC_GENEFAM","INTERCHROMOSOMAL[chr14--chr7]"]
B3GNTL1--FOXK2	1	0	1.00	0.00	ONLY_REF_SPLICE	B3GNTL1^ENSG00000175711.8	chr17:83035035:-	FOXK2^ENSG00000141568.21	chr17:82563354:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2195:16968:11366	.	YES_LDAS	0.1007	GT	1.6402	AG	1.9656	["INTRACHROMOSOMAL[chr17:0.30Mb]"]
ATP5ME--MKI67	1	0	1.00	0.00	INCL_NON_REF_SPLICE	ATP5ME^ENSG00000169020.10	chr4:672504:-	MKI67^ENSG00000148773.14	chr10:128119319:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1160:7417:4781	.	NO_LDAS	0.1007	GT	1.7968	AG	1.4566	["INTERCHROMOSOMAL[chr4--chr10]"]
ATP5ME--L3MBTL3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	ATP5ME^ENSG00000169020.10	chr4:672504:-	L3MBTL3^ENSG00000198945.8	chr6:130022227:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1168:2304:14090	.	NO_LDAS	0.1007	GT	1.7968	AG	1.8295	["INTERCHROMOSOMAL[chr4--chr6]"]
ATP5F1B--UBB	1	0	1.00	0.00	INCL_NON_REF_SPLICE	ATP5F1B^ENSG00000110955.9	chr12:56640108:-	UBB^ENSG00000170315.14	chr17:16381989:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2183:46398:6608	.	YES_LDAS	0.1007	GT	1.8892	AG	1.9329	["INTERCHROMOSOMAL[chr12--chr17]"]
ATP11A--CUL4A	1	0	1.00	0.00	ONLY_REF_SPLICE	ATP11A^ENSG00000068650.18	chr13:112842379:+	CUL4A^ENSG00000139842.15	chr13:113253082:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1267:10949:22342	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8323	["ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.32Mb]"]
ATG13--MLLT10	1	0	1.00	0.00	ONLY_REF_SPLICE	ATG13^ENSG00000175224.16	chr11:46630100:+	MLLT10^ENSG00000078403.17	chr10:21586294:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1254:14425:3307	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8062	["INTERCHROMOSOMAL[chr11--chr10]"]
ATAD3B--NPAS3	1	0	1.00	0.00	ONLY_REF_SPLICE	ATAD3B^ENSG00000160072.20	chr1:1477350:+	NPAS3^ENSG00000151322.20	chr14:33578239:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1140:46001:22646	.	NO_LDAS	0.1007	GT	1.8323	AG	1.8892	["INTERCHROMOSOMAL[chr1--chr14]"]
ATAD3B--AC124947.1	1	0	1.00	0.00	ONLY_REF_SPLICE	ATAD3B^ENSG00000160072.20	chr1:1477350:+	AC124947.1^ENSG00000257252.6	chr12:93339736:-	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1106:21563:12184	.	NO_LDAS	0.1007	GT	1.8323	AG	1.8295	["INTERCHROMOSOMAL[chr1--chr12]"]
ATAD2B--BIRC6	1	0	1.00	0.00	ONLY_REF_SPLICE	ATAD2B^ENSG00000119778.15	chr2:23857415:-	BIRC6^ENSG00000115760.14	chr2:32514990:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2262:26445:17631	.	YES_LDAS	0.1007	GT	1.8892	AG	1.5546	["INTRACHROMOSOMAL[chr2:8.43Mb]"]
ARNT--FOXP1	1	0	1.00	0.00	ONLY_REF_SPLICE	ARNT^ENSG00000143437.21	chr1:150816259:-	FOXP1^ENSG00000114861.23	chr3:71047089:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2243:43144:4589	.	NO_LDAS	0.1007	GT	1.8256	AG	1.9086	["INTERCHROMOSOMAL[chr1--chr3]"]
ARMC10--TANK	1	0	1.00	0.00	ONLY_REF_SPLICE	ARMC10^ENSG00000170632.14	chr7:103083830:+	TANK^ENSG00000136560.14	chr2:161230971:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2262:42654:16558	.	YES_LDAS	0.1007	GT	1.7819	AG	1.9656	["INTERCHROMOSOMAL[chr7--chr2]"]
ARMC10--PSMC2	1	0	1.00	0.00	ONLY_REF_SPLICE	ARMC10^ENSG00000170632.14	chr7:103075881:+	PSMC2^ENSG00000161057.13	chr7:103361957:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2156:32797:24505	.	YES_LDAS	0.1007	GT	1.8892	AG	1.7465	["INTRACHROMOSOMAL[chr7:0.23Mb]"]
ARID4B--HMGB3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	ARID4B^ENSG00000054267.22	chr1:235229242:-	HMGB3^ENSG00000029993.15	chrX:150987862:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2209:46500:2714	.	YES_LDAS	0.1007	GT	1.6895	AG	1.2867	["INTERCHROMOSOMAL[chr1--chrX]"]
ARID1B--ZDHHC14	1	0	1.00	0.00	ONLY_REF_SPLICE	ARID1B^ENSG00000049618.24	chr6:157167185:+	ZDHHC14^ENSG00000175048.17	chr6:157542585:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2118:20685:24024	.	YES_LDAS	0.1007	GT	1.9329	AG	1.8062	["TCGA_StarF2019","INTRACHROMOSOMAL[chr6:0.17Mb]"]
ARHGEF26-AS1--ANKRD36	1	0	0.50	0.00	ONLY_REF_SPLICE	ARHGEF26-AS1^ENSG00000243069.8	chr3:154119686:-	ANKRD36^ENSG00000135976.20	chr2:97224806:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1214:41137:17711	.	YES_LDAS	0.0504	GC	1.9329	AG	1.8295	["INTERCHROMOSOMAL[chr3--chr2]"]
ARHGAP6--ARFIP1	1	0	1.00	0.00	ONLY_REF_SPLICE	ARHGAP6^ENSG00000047648.23	chrX:11664241:-	ARFIP1^ENSG00000164144.16	chr4:152829625:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1119:20167:8835	.	NO_LDAS	0.1007	GT	1.8892	AG	1.9899	["INTERCHROMOSOMAL[chrX--chr4]"]
ARF4--ITPR2	1	0	1.00	0.00	ONLY_REF_SPLICE	ARF4^ENSG00000168374.11	chr3:57597074:-	ITPR2^ENSG00000123104.12	chr12:26655852:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2248:31318:12039	.	NO_LDAS	0.1007	GT	1.8323	AG	1.7056	["INTERCHROMOSOMAL[chr3--chr12]"]
ARF3--SNX5	1	0	1.00	0.00	ONLY_REF_SPLICE	ARF3^ENSG00000134287.10	chr12:48939655:-	SNX5^ENSG00000089006.17	chr20:17961326:-	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2273:51262:1833	.	YES_LDAS	0.1007	GT	1.8295	AG	1.8892	["INTERCHROMOSOMAL[chr12--chr20]"]
APLP2--CERS3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	APLP2^ENSG00000084234.18	chr11:130121799:+	CERS3^ENSG00000154227.14	chr15:100402823:-	&rna_s1221_S42@LH00166:156:2373MLLT3:6:1266:1055:7345	.	NO_LDAS	0.1007	GT	1.7819	AG	0.9968	["INTERCHROMOSOMAL[chr11--chr15]"]
AP1B1--AC025031.2	1	0	1.00	0.00	ONLY_REF_SPLICE	AP1B1^ENSG00000100280.17	chr22:29334265:-	AC025031.2^ENSG00000258096.1	chr12:46373313:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:2259:45890:15532	.	YES_LDAS	0.1007	GT	1.9086	AG	1.7056	["INTERCHROMOSOMAL[chr22--chr12]"]
AP003721.1--ZMIZ1	1	0	1.00	0.00	ONLY_REF_SPLICE	AP003721.1^ENSG00000256196.2	chr11:60925219:-	ZMIZ1^ENSG00000108175.18	chr10:79277181:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1113:27342:18801	.	NO_LDAS	0.1007	GT	1.8256	AG	1.4295	["INTERCHROMOSOMAL[chr11--chr10]"]
AP000845.1--NT5C3A	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AP000845.1^ENSG00000263884.1	chr18:268873:+	NT5C3A^ENSG00000122643.22	chr7:33015870:-	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1280:31484:4477	.	YES_LDAS	0.1007	GT	1.9656	AG	1.7968	["INTERCHROMOSOMAL[chr18--chr7]"]
ANKRD44--KANSL1L	1	0	1.00	0.00	ONLY_REF_SPLICE	ANKRD44^ENSG00000065413.20	chr2:197310578:-	KANSL1L^ENSG00000144445.17	chr2:210154611:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:2172:45224:1112	.	NO_LDAS	0.1007	GT	1.7056	AG	1.7465	["INTRACHROMOSOMAL[chr2:12.71Mb]"]
AL139260.1--SEC61A2	1	0	1.00	0.00	ONLY_REF_SPLICE	AL139260.1^ENSG00000228436.3	chr1:38860239:+	SEC61A2^ENSG00000065665.21	chr10:12156907:+	&rna_s1221_S42@LH00166:156:2373MLLT3:6:2288:48997:1144	.	YES_LDAS	0.1007	GT	1.9656	AG	1.7819	["INTERCHROMOSOMAL[chr1--chr10]"]
AL133215.2--TAF5L	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AL133215.2^ENSG00000273162.1	chr10:101060110:-	TAF5L^ENSG00000135801.10	chr1:229602919:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1182:19233:7825	.	YES_LDAS	0.1007	GT	1.9329	AG	1.9086	["INTERCHROMOSOMAL[chr10--chr1]"]
AGO2--RCOR3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AGO2^ENSG00000123908.12	chr8:140635485:-	RCOR3^ENSG00000117625.14	chr1:211303256:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2146:13945:1673	.	NO_LDAS	0.1007	GT	1.2867	AG	1.7056	["INTERCHROMOSOMAL[chr8--chr1]"]
AGFG1--AP3M1	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AGFG1^ENSG00000173744.18	chr2:227552117:+	AP3M1^ENSG00000185009.13	chr10:74122031:-	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1175:17643:14619	.	NO_LDAS	0.1007	GT	1.8323	AG	1.7232	["INTERCHROMOSOMAL[chr2--chr10]"]
ADK--AC008429.2	1	0	0.50	0.00	INCL_NON_REF_SPLICE	ADK^ENSG00000156110.15	chr10:74314745:+	AC008429.2^ENSG00000253785.1	chr5:172975808:+	&rna_s1221_S42@LH00166:156:2373MLLT3:3:1232:21415:24424	.	YES_LDAS	0.0504	GT	1.9329	AG	1.9329	["INTERCHROMOSOMAL[chr10--chr5]"]
ADGRE5--CPSF6	1	0	1.00	0.00	ONLY_REF_SPLICE	ADGRE5^ENSG00000123146.20	chr19:14391079:+	CPSF6^ENSG00000111605.18	chr12:69251129:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1256:32307:17182	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8256	["INTERCHROMOSOMAL[chr19--chr12]"]
ADAT2--CD40	1	0	1.00	0.00	ONLY_REF_SPLICE	ADAT2^ENSG00000189007.16	chr6:143450563:-	CD40^ENSG00000101017.14	chr20:46128138:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:1294:2220:2346	.	YES_LDAS	0.1007	GT	1.8892	AG	1.8323	["INTERCHROMOSOMAL[chr6--chr20]"]
ACTR3C--AC006008.1	1	0	1.00	0.00	ONLY_REF_SPLICE	ACTR3C^ENSG00000106526.10	chr7:150284753:-	AC006008.1^ENSG00000286912.1	chr7:150237608:-	&rna_s1221_S42@LH00166:156:2373MLLT3:4:2130:9164:15051	.	YES_LDAS	0.1007	GT	1.9899	AG	1.7968	["INTRACHROMOSOMAL[chr7:0.01Mb]","NEIGHBORS[6308]"]
ACTN4--EIF3K	1	0	1.00	0.00	ONLY_REF_SPLICE	ACTN4^ENSG00000130402.13	chr19:38706131:+	EIF3K^ENSG00000178982.10	chr19:38624077:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1212:29931:8418	.	YES_LDAS	0.1007	GT	1.9086	AG	1.8892	["TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr19:0.01Mb]","LOCAL_REARRANGEMENT:+:[10694]"]
AC244258.1--DST	1	0	0.50	0.00	ONLY_REF_SPLICE	AC244258.1^ENSG00000283453.2	chr6:60283705:+	DST^ENSG00000151914.21	chr6:56900621:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1178:27213:9956	.	YES_LDAS	0.0504	GT	1.9899	AG	1.9086	["INTRACHROMOSOMAL[chr6:3.33Mb]"]
AC104809.1--RPL19	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AC104809.1^ENSG00000223991.1	chr2:240982291:-	RPL19^ENSG00000108298.12	chr17:39204105:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2270:24041:28718	.	NO_LDAS	0.1007	GT	1.7056	AG	1.8256	["INTERCHROMOSOMAL[chr2--chr17]"]
AC091390.3--RPA3	1	0	0.50	0.00	INCL_NON_REF_SPLICE	AC091390.3^ENSG00000239969.5	chr7:102376322:+	RPA3^ENSG00000106399.11	chr7:7638721:-	&rna_s1221_S42@LH00166:156:2373MLLT3:2:1147:37208:12055	.	NO_LDAS	0.0504	GT	1.9656	AG	1.8892	["INTRACHROMOSOMAL[chr7:94.65Mb]"]
AC078883.1--SYNE2	1	0	1.00	0.00	ONLY_REF_SPLICE	AC078883.1^ENSG00000225205.5	chr2:172495375:-	SYNE2^ENSG00000054654.19	chr14:63909098:+	&rna_s1221_S42@LH00166:156:2373MLLT3:4:1159:39436:21557	.	YES_LDAS	0.1007	GT	1.9329	AG	1.5058	["INTERCHROMOSOMAL[chr2--chr14]"]
AC068888.1--IGH-@-ext	1	0	0.50	0.00	INCL_NON_REF_SPLICE	AC068888.1^ENSG00000257337.7	chr12:53039232:-	IGH-@-ext^IGH-.g@-ext	chr14:106598608:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:1290:45650:12488	.	NO_LDAS	0.0504	GG	1.5546	CC	1.5628	["INTERCHROMOSOMAL[chr12--chr14]"]
AC062037.3--TRIP4	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AC062037.3^ENSG00000286011.1	chr2:85421713:+	TRIP4^ENSG00000103671.10	chr15:64395452:+	&rna_s1221_S42@LH00166:156:2373MLLT3:7:2261:32492:9043	.	NO_LDAS	0.1007	GT	1.7232	AG	1.4295	["INTERCHROMOSOMAL[chr2--chr15]"]
AC009403.1--ODR4	1	0	1.00	0.00	ONLY_REF_SPLICE	AC009403.1^ENSG00000216895.9	chr7:155643468:-	ODR4^ENSG00000157181.16	chr1:186406083:+	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1226:18734:11414	.	YES_LDAS	0.1007	GT	1.6402	AG	1.7465	["INTERCHROMOSOMAL[chr7--chr1]"]
AC008740.1--CRYM-AS1	1	0	1.00	0.00	ONLY_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	CRYM-AS1^ENSG00000189149.12	chr16:21315884:+	&rna_s1221_S42@LH00166:156:2373MLLT3:8:2152:45955:25866	.	YES_LDAS	0.1007	GT	1.7232	AG	1.8892	["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"]
AC008035.1--LRIG3	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AC008035.1^ENSG00000272369.1	chr12:46652552:+	LRIG3^ENSG00000139263.12	chr12:58890796:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:2197:26556:4204	.	YES_LDAS	0.1007	GT	1.9656	AG	1.8323	["INTRACHROMOSOMAL[chr12:12.22Mb]"]
AC006064.4--TNRC18	1	0	1.00	0.00	INCL_NON_REF_SPLICE	AC006064.4^ENSG00000269968.1	chr12:6538260:-	TNRC18^ENSG00000182095.14	chr7:5345796:-	&rna_s1221_S42@LH00166:156:2373MLLT3:1:1239:5225:20787	.	NO_LDAS	0.1007	GT	1.7465	AG	1.2310	["INTERCHROMOSOMAL[chr12--chr7]"]
ABCD3--FNDC3B	1	0	1.00	0.00	ONLY_REF_SPLICE	ABCD3^ENSG00000117528.14	chr1:94418588:+	FNDC3B^ENSG00000075420.13	chr3:172330541:+	&rna_s1221_S42@LH00166:156:2373MLLT3:2:2262:44993:2891	.	YES_LDAS	0.1007	GT	1.6895	AG	1.9329	["INTERCHROMOSOMAL[chr1--chr3]"]
AACS--IRAK3	1	0	1.00	0.00	ONLY_REF_SPLICE	AACS^ENSG00000081760.17	chr12:125107268:+	IRAK3^ENSG00000090376.11	chr12:66203711:+	&rna_s1221_S42@LH00166:156:2373MLLT3:5:1175:48849:7329	.	YES_LDAS	0.1007	GT	1.8062	AG	1.9219	["INTRACHROMOSOMAL[chr12:58.81Mb]"]