nfcore/rnafusion summary report

Databases: COSMIC Mitelman FusionGDB2

Score: 0.625 (explain)

Explained score: 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000)

position: chr1:154170400:-#chr1:156874571:+
junction_reads: 12
spanning_reads: 1
ffmp: 1.3094

position: chr1:154170400#chr1:156874571
reading-frame: in-frame
type: inversion
split_reads1: 4
split_reads2: 4
discordant_mates: 1
coverage1: 692
coverage2: 34
confidence: high

{'starfusion': {'position': 'chr1:154170400:-#chr1:156874571:+', 'junction_reads': 12, 'spanning_reads': 1, 'ffmp': 1.3094}, 'arriba': {'position': 'chr1:154170400#chr1:156874571', 'reading-frame': 'in-frame', 'type': 'inversion', 'split_reads1': '4', 'split_reads2': '4', 'discordant_mates': '1', 'coverage1': '692', 'coverage2': '34', 'confidence': 'high'}}

TPM3--NTRK1