.command.sh - Workdir - NFCORE_RNAFUSION:RNAFUSION:MULTIQC_GENERAL_STATS_TXT_TO_JSON (multiqc_data)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/58b7f16f308b20d4a6d82cb260451b/.command.sh
Size: 387 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:MULTIQC_GENERAL_STATS_TXT_TO_JSON (multiqc_data)
Attempt

Content

#!/bin/bash -euo pipefail
# Convert TXT to JSON (script creates JSON in same directory as input)
multiqc_general_stats_txt_to_json.py "multiqc_data/multiqc_general_stats.txt"

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:MULTIQC_GENERAL_STATS_TXT_TO_JSON":
    python: $(python3 --version | sed 's/Python //g')
    multiqc_general_stats_txt_to_json: 1.0.0
END_VERSIONS