| succeeded | COPY_INPUT_TO_OUTDIR (copy_input) | 55s | 53s | - | - | 3.2 MB | 149% | 70.4 KB | 1.1 KB | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1221_S42) | 7s | 4s | 0s | 2s | 13.0 MB | 650% | 38.7 MB | 130.6 KB | 0 bytes | 148.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) | 2m 0s | 44s | 1m 4s | 12s | 4.8 GB | 100% | 5.2 GB | 65.1 MB | 0 bytes | 65.1 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1221_S42) | 3s | 2s | - | - | 12.7 MB | 109% | 1.1 MB | 5.8 KB | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1221_S42) | 5s | 4s | 0s | 0s | 0 bytes | 128% | 65.5 KB | 937 bytes | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) | 1m 53s | 17s | 10s | 1m 25s | 556.8 MB | 174% | 224.0 MB | 19.4 MB | 170.0 MB | 19.5 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) | 14s | 2s | 6s | 6s | 23.9 MB | 141% | 926.4 MB | 2.3 MB | 0 bytes | 2.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) | 5m 25s | 26s | 3m 32s | 1m 27s | 35.6 GB | 1141% | 45.8 GB | 9.8 GB | 2.8 GB | 9.6 GB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) | 2m 11s | 59s | 1m 9s | 3s | 657.5 MB | 201% | 1.2 GB | 4.0 MB | 0 bytes | 4.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) | 17s | 13s | 3s | 1s | 91.1 MB | 100% | 21.4 MB | 3.2 MB | 0 bytes | 3.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) | 3m 55s | 30s | 3m 18s | 7s | 2.3 GB | 105% | 1.5 GB | 11.2 MB | 0 bytes | 11.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) | 10m 55s | 1m 6s | 8m 20s | 1m 28s | 35.9 GB | 219% | 40.2 GB | 3.7 GB | 1.6 GB | 99.4 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) | 22s | 18s | 1s | 3s | 183.2 MB | 807% | 34.1 MB | 46.7 KB | 0 bytes | 52.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) | 15s | 8s | 2s | 4s | 128.1 MB | 252% | 70.9 MB | 25.1 MB | 0 bytes | 25.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) | 1m 37s | 1m 4s | 24s | 9s | 3.1 GB | 101% | 1.3 GB | 27.7 MB | 4.0 KB | 27.7 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) | 3m 58s | 52s | 3m 0s | 6s | 2.8 GB | 177% | 1.7 GB | 605.9 MB | 0 bytes | 606.0 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) | 2m 12s | 2s | 1m 57s | 13s | 1.4 GB | 271% | 1.5 GB | 19.3 MB | 1.4 GB | 19.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) | 4s | 3s | 0s | 0s | 12.6 MB | 1715% | 4.6 MB | 3.7 KB | 0 bytes | 8.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) | 26s | 22s | 1s | 3s | 216.9 MB | 304% | 44.3 MB | 1.3 MB | 0 bytes | 1.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC | 23s | 16s | 3s | 3s | 103.0 MB | 243% | 71.6 MB | 22.9 MB | 0 bytes | 23.1 MB | 1 |