Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/1a5d251a226dfcbbaba9247e2a6db0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/4be880eb6bc2edc369423e8ed7f0cb/rna_s1221_S42.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/1a5d251a226dfcbbaba9247e2a6db0/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory