sample_id	category	signature	score_log2tpm1_mean	n_present	n_in_signature_targeted
rna_s1221_S42	cancer	Angiogenesis_VEGF	1.926	9	9
rna_s1221_S42	cancer	BMP_signaling	2.569	13	13
rna_s1221_S42	cancer	Cell_cycle	5.123	15	15
rna_s1221_S42	cancer	Hedgehog_signaling	1.553	10	10
rna_s1221_S42	cancer	Hippo_signaling	3.216	13	13
rna_s1221_S42	cancer	Homologous_recombination_repair	5.274	33	33
rna_s1221_S42	cancer	Hormone_receptor_signaling	2.148	8	8
rna_s1221_S42	cancer	JAK_STAT	6.566	11	11
rna_s1221_S42	cancer	MSI_MMR	5.608	23	23
rna_s1221_S42	cancer	MYC_signaling	3.778	5	5
rna_s1221_S42	cancer	Metastasis_EMT	2.912	39	39
rna_s1221_S42	cancer	NFkB_signaling	6.04	10	10
rna_s1221_S42	cancer	NOTCH_signaling	3.467	27	27
rna_s1221_S42	cancer	PI3K_AKT_mTOR	5.244	18	18
rna_s1221_S42	cancer	RTK_MAPK_signaling	3.538	32	32
rna_s1221_S42	cancer	TGFb_signaling	3.699	13	13
rna_s1221_S42	cancer	WNT_signaling	2.396	38	38
rna_s1221_S42	cancer	p53_pathway	7.244	7	7
rna_s1221_S42	housekeeping	Housekeeping_core_minimal	8.353	10	10
rna_s1221_S42	housekeeping	Housekeeping_normalization	9.101	20	20
rna_s1221_S42	sex_chromosome	chry_signature	6.823	5	5
rna_s1221_S42	tissue_origin	Bladder	1.394	12	12
rna_s1221_S42	tissue_origin	Brain_Glioma	0.771	9	9
rna_s1221_S42	tissue_origin	Breast	1.43	13	13
rna_s1221_S42	tissue_origin	Breast_Basal_like_TNBC	2.625	8	8
rna_s1221_S42	tissue_origin	Breast_HER2_enriched	2.277	9	9
rna_s1221_S42	tissue_origin	Breast_Luminal_A	2.041	10	10
rna_s1221_S42	tissue_origin	Breast_Luminal_B	3.597	11	11
rna_s1221_S42	tissue_origin	Colorectal	0.361	13	13
rna_s1221_S42	tissue_origin	Endometrial	1.207	9	9
rna_s1221_S42	tissue_origin	Kidney_ClearCell	2.651	8	8
rna_s1221_S42	tissue_origin	Liver	0.298	10	10
rna_s1221_S42	tissue_origin	Lung_Adenocarcinoma	0.957	9	9
rna_s1221_S42	tissue_origin	Lung_Squamous	0.684	7	7
rna_s1221_S42	tissue_origin	Melanoma	0.918	7	7
rna_s1221_S42	tissue_origin	Neuroendocrine	1.197	8	8
rna_s1221_S42	tissue_origin	Ovary	1.284	8	8
rna_s1221_S42	tissue_origin	Pancreas	1.349	10	10
rna_s1221_S42	tissue_origin	Prostate	0.276	7	7
rna_s1221_S42	tissue_origin	Upper_Urinary_Tract	1.054	11	11