rna_s1221_S42.starfusion.starfusion.fusion_predictions.tsv

File Info

Filename: rna_s1221_S42.starfusion.starfusion.fusion_predictions.tsv
Full Path: s3://natera-platform-sandbox/users/smarinkovic/rnapipeline_vcf_bgzip_final_test/starfusion/rna_s1221_S42.starfusion.starfusion.fusion_predictions.tsv
Size: 128.5 KB
Workflow Run: rnapipeline_vcf_bgzip_final_test
Published: Jun 03, 2026 6:06 AM

Content

#FusionName JunctionReadCount SpanningFragCount est_J est_S SpliceType LeftGene LeftBreakpoint RightGene RightBreakpoint JunctionReads SpanningFrags LargeAnchorSupport FFPM LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy annots

FGFR3--TACC3 38 1 38.00 1.00 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ TACC3^ENSG00000013810.20 chr4:1739702:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1172:1619:13834

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1239:20019:22518

&rna_s1221_S42@LH00166:156:2373MLLT3:1:2228:45344:9876

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1172:44642:19842

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1175:14185:7537

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1205:37855:29263

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1177:27028:5150

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1219:42108:14010

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1112:29497:22117

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1114:11402:3804

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1127:16016:27341

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1212:44124:19426

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1287:21120:18368

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2146:26334:11959

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2279:36810:6976

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1207:19779:2682

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1296:20029:29455

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2189:3367:11607

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2214:8739:9251

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2101:44133:11591

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2117:32899:4525

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2138:23477:4669

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2236:33112:19025

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2252:17625:29231

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1149:9543:16926

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1152:5974:19361

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1159:18531:3564

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1202:38928:29199

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1271:31975:24360

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2183:24208:2378

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1176:29876:27292

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1218:50337:7120

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2134:13159:6335

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2155:7990:17182

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2164:23357:14074

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2236:27509:5598

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2241:13704:8627

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2267:10385:24825 &rna_s1221_S42@LH00166:156:2373MLLT3:4:2211:8693:12119 YES_LDAS 3.9283 GT 1.8892 AG 1.7819 ["ChimerKB"

ChimerSeq

TCGA_StarF2019

CCLE_StarF2019

YOSHIHARA_TCGA

Klijn_CellLines

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTRACHROMOSOMAL[chr4:0.05Mb]

LOCAL_REARRANGEMENT:+:[48122]]

KIF5B--RET 26 1 26.00 1.00 ONLY_REF_SPLICE KIF5B^ENSG00000170759.11 chr10:32017143:- RET^ENSG00000165731.20 chr10:43114480:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1123:43911:25081

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1198:5078:13065

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1235:31041:14603

&rna_s1221_S42@LH00166:156:2373MLLT3:1:2263:47526:1737

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1151:25456:6079

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1241:17819:5630

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1242:3903:4076

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1261:2100:19634

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2285:30939:28879

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2288:34009:5230

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1267:9904:24985

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2101:17976:26027

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2269:17097:11783

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2279:4282:19826

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2283:44272:18849

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1291:51132:25258

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2144:30486:10950

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1137:14934:9668

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1190:13159:25979

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2211:30856:24088

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1227:47952:25642

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1258:7112:2298

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2204:21175:1993

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2145:46093:10373

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2211:17662:11863

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2295:19511:20932 &rna_s1221_S42@LH00166:156:2373MLLT3:6:1139:40758:9300 YES_LDAS 2.7196 GT 1.9656 AG 1.9656 ["ChimerKB"

ChimerPub

Cosmic

ChimerSeq

INTRACHROMOSOMAL[chr10:11.02Mb]]

LMNA--NTRK1 24 0 24.00 0.00 ONLY_REF_SPLICE LMNA^ENSG00000160789.23 chr1:156130773:+ NTRK1^ENSG00000198400.13 chr1:156874906:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1122:13159:27004

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1166:8434:20675

&rna_s1221_S42@LH00166:156:2373MLLT3:1:2116:43014:11190

&rna_s1221_S42@LH00166:156:2373MLLT3:1:2160:18096:16269

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2219:47943:3099

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1208:11254:7617

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2121:25114:26059

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2141:34628:14827

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2212:6603:28013

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2259:49681:28222

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2278:12484:26283

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1143:26427:18849

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1227:39029:2554

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2145:39492:2458

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2172:36625:11334

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1240:40074:28174

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2138:21656:8018

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1272:42561:11751

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1285:42219:9428

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2252:28923:19073

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2145:49403:2554

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2150:34859:18208

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2170:10819:8306

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2268:40906:25065 . YES_LDAS 2.4174 GT 1.7465 AG 1.5058 ["ChimerKB"

ChimerPub

Cosmic

TCGA_StarF2019

INTRACHROMOSOMAL[chr1:0.68Mb]]

FGFR3--BAIAP2L1 24 0 24.00 0.00 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ BAIAP2L1^ENSG00000006453.14 chr7:98362432:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1149:37587:26107

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1225:4356:24921

&rna_s1221_S42@LH00166:156:2373MLLT3:1:2112:51151:9684

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1184:33047:14010

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1210:25659:12616

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2267:41063:20307

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2268:37531:12552

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1222:41332:29680

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1288:25641:9988

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1181:45446:11238

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1209:9146:23703

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1247:47268:15292

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1124:19945:1176

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1228:20925:8482

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2259:17153:27517

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1280:32612:2811

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2230:51049:4957

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2281:28221:21765

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1276:2267:23543

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2257:31226:15885

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1201:21443:28094

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1207:30236:20387

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1236:46999:11911

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2173:31577:28927 . YES_LDAS 2.4174 GT 1.8892 AG 1.8062 ["ChimerKB"

Klijn_CellLines

ChimerPub

Cosmic

CCLE_StarF2019

INTERCHROMOSOMAL[chr4--chr7]]

ETV6--NTRK3 14 0 14.00 0.00 ONLY_REF_SPLICE ETV6^ENSG00000139083.11 chr12:11869969:+ NTRK3^ENSG00000140538.16 chr15:87940753:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2226:17698:7633

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1229:43680:29520

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1268:25965:21284

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2274:12326:27549

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2101:16469:4925

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1193:25909:4909

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2262:43236:15965

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2288:18022:7938

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2289:32890:6111

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1257:4375:19602

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1158:14869:20259

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1182:47489:3211

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1263:34351:15372

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2109:41147:5422 . YES_LDAS 1.4102 GT 1.7819 AG 1.9656 ["ChimerKB"

Larsson_TCGA

ChimerSeq

TCGA_StarF2019

YOSHIHARA_TCGA

HaasMedCancer

chimerdb_pubmed

chimerdb_omim

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTERCHROMOSOMAL[chr12--chr15]]

CD74--ROS1 14 1 14.00 1.00 ONLY_REF_SPLICE CD74^ENSG00000019582.16 chr5:150404680:- ROS1^ENSG00000047936.11 chr6:117324415:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1242:5956:14298

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1274:39935:16590

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1188:15674:16333

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2163:33824:5102

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1104:22534:14379

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1286:35525:28110

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2146:14102:23415

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2173:24504:10325

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1293:12770:12872

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1123:16644:14106

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2166:2757:24008

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2283:26908:22181

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2290:14102:27228

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1125:3349:24360 &rna_s1221_S42@LH00166:156:2373MLLT3:3:1165:42524:4637 YES_LDAS 1.5109 GT 1.7819 AG 1.7465 ["ChimerKB"

ChimerSeq

TCGA_StarF2019

Klijn_CellLines

chimerdb_pubmed

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTERCHROMOSOMAL[chr5--chr6]]

EGFR--SEPTIN14 13 0 13.00 0.00 ONLY_REF_SPLICE EGFR^ENSG00000146648.19 chr7:55200413:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1156:27148:12248

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1251:31438:8370

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1166:5863:7954

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1242:6677:20355

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2184:8628:2170

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1230:40333:8883

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1151:43458:22310

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2224:43393:2202

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2286:7879:28590

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1186:28332:29552

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1251:5484:25722

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2123:24578:7441

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2256:46685:8322 . YES_LDAS 1.3094 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr7:0.58Mb]"]

TFG--NTRK1 12 0 12.00 0.00 ONLY_REF_SPLICE TFG^ENSG00000114354.15 chr3:100732672:+ NTRK1^ENSG00000198400.13 chr1:156874571:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1273:9802:19329

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1204:47721:29343

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1136:30255:10293

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2202:35664:22422

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2249:39482:4044

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2264:36172:11607

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1205:33851:4028

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1218:39260:1705

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1285:20176:2122

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2239:44337:15789

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1155:23644:3644

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2135:15424:27469 . YES_LDAS 1.2087 GT 1.9329 AG 1.6895 ["ChimerKB"

ChimerSeq

TCGA_StarF2019

HaasMedCancer

DEEPEST2019

chimerdb_pubmed

TumorFusionsNAR2018

Cosmic

INTERCHROMOSOMAL[chr3--chr1]]

SLC45A3--BRAF 12 0 12.00 0.00 ONLY_REF_SPLICE SLC45A3^ENSG00000158715.6 chr1:205680394:- BRAF^ENSG00000157764.14 chr7:140794467:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1193:28849:22758

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1129:51253:2778

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1166:40703:28142

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2169:37208:4044

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1152:25345:18480

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1284:39094:5486

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2256:34979:8803

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1101:8693:12344

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1191:44817:12552

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1283:51123:12744

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2162:4634:23287

&rna_s1221_S42@LH00166:156:2373MLLT3:8:2170:5152:6592 . YES_LDAS 1.2087 GT 1.5628 AG 1.7465 ["ChimerKB"

ChimerPub

Cosmic

ChimerSeq

INTERCHROMOSOMAL[chr1--chr7]]

TPM3--NTRK1 12 1 12.00 1.00 ONLY_REF_SPLICE TPM3^ENSG00000143549.21 chr1:154170400:- NTRK1^ENSG00000198400.13 chr1:156874571:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2292:44910:16814

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1107:1740:2506

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2256:27194:19121

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1212:12132:11062

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2113:25826:21749

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1135:39871:24457

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2235:50115:1513

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1248:30319:16558

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2185:4023:2234

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2277:8684:23928

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2298:45964:5054

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1124:49080:9364 &rna_s1221_S42@LH00166:156:2373MLLT3:2:1195:9728:29488 YES_LDAS 1.3094 GT 1.9329 AG 1.6895 ["ChimerKB"

ChimerSeq

TCGA_StarF2019

CCLE_StarF2019

HaasMedCancer

Klijn_CellLines

chimerdb_pubmed

DEEPEST2019

ChimerPub

TumorFusionsNAR2018

Cosmic

INTRACHROMOSOMAL[chr1:2.62Mb]]

PAX8--PPARG 11 0 11.00 0.00 ONLY_REF_SPLICE PAX8^ENSG00000125618.18 chr2:113235394:- PPARG^ENSG00000132170.23 chr3:12379704:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1235:18697:19554

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1296:50273:6848

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1291:24328:27132

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1229:19677:28110

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2218:47323:6736

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1281:23671:8947

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2102:15045:18224

&rna_s1221_S42@LH00166:156:2373MLLT3:4:2179:36625:28318

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1130:51234:25947

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1154:42154:19057

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1287:1499:18080 . YES_LDAS 1.108 GT 1.8295 AG 1.9329 ["Mitelman"

ChimerKB

ChimerSeq

TCGA_StarF2019

YOSHIHARA_TCGA

HaasMedCancer

chimerdb_pubmed

chimerdb_omim

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTERCHROMOSOMAL[chr2--chr3]]

NCOA4--RET 9 0 9.00 0.00 ONLY_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46012883:- RET^ENSG00000165731.20 chr10:43116584:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1102:17134:27357

&rna_s1221_S42@LH00166:156:2373MLLT3:1:1114:40703:14715

&rna_s1221_S42@LH00166:156:2373MLLT3:2:2244:30708:4381

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1117:38512:11623

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1177:3247:9380

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1256:4763:8803

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2208:3950:25306

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1293:16663:4012

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2130:33722:26812 . YES_LDAS 0.9065 GT 1.9086 AG 1.8323 ["ChimerKB"

ChimerSeq

TCGA_StarF2019

YOSHIHARA_TCGA

HaasMedCancer

chimerdb_pubmed

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTRACHROMOSOMAL[chr10:2.87Mb]]

CCDC6--RET 8 0 8.00 0.00 ONLY_REF_SPLICE CCDC6^ENSG00000108091.11 chr10:59906122:- RET^ENSG00000165731.20 chr10:43116584:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1136:51678:13097

&rna_s1221_S42@LH00166:156:2373MLLT3:2:1109:13704:13273

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1242:48960:8899

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2145:11642:19217

&rna_s1221_S42@LH00166:156:2373MLLT3:3:2182:29866:19714

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1187:13898:1945

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2246:10126:25690

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2250:33796:12584 . YES_LDAS 0.8058 GT 1.8892 AG 1.8323 ["Mitelman"

ChimerKB

Larsson_TCGA

ChimerSeq

TCGA_StarF2019

YOSHIHARA_TCGA

HaasMedCancer

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTRACHROMOSOMAL[chr10:16.66Mb]]

LEPROTL1--SMG1P1 4 0 2.00 0.00 ONLY_REF_SPLICE LEPROTL1^ENSG00000104660.19 chr8:30104991:+ SMG1P1^ENSG00000237296.9 chr16:22451620:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1260:20777:29151

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2105:48312:13193

&rna_s1221_S42@LH00166:156:2373MLLT3:5:2127:15840:25850

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2117:19631:6464 . YES_LDAS 0.2015 GC 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr16]"]

SLC34A2--ROS1 3 0 3.00 0.00 ONLY_REF_SPLICE SLC34A2^ENSG00000157765.13 chr4:25664330:+ ROS1^ENSG00000047936.11 chr6:117324415:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1218:12382:4957

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1224:20361:6319

&rna_s1221_S42@LH00166:156:2373MLLT3:8:1168:6575:6976 . YES_LDAS 0.3022 GT 1.8892 AG 1.7465 ["ChimerKB"

ChimerSeq

TCGA_StarF2019

CCLE_StarF2019

Klijn_CellLines

GUO2018CR_TCGA

chimerdb_pubmed

ChimerPub

Cosmic

INTERCHROMOSOMAL[chr4--chr6]]

EML4--ALK 3 0 3.00 0.00 ONLY_REF_SPLICE EML4^ENSG00000143924.19 chr2:42295516:+ ALK^ENSG00000171094.18 chr2:29223528:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1212:34526:23399

&rna_s1221_S42@LH00166:156:2373MLLT3:1:2142:30717:8114

&rna_s1221_S42@LH00166:156:2373MLLT3:3:1292:38364:5951 . YES_LDAS 0.3022 GT 1.6895 AG 1.9086 ["ChimerKB"

ChimerSeq

TCGA_StarF2019

CCLE_StarF2019

YOSHIHARA_TCGA

HaasMedCancer

Klijn_CellLines

chimerdb_pubmed

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTRACHROMOSOMAL[chr2:12.25Mb]]

CCDC32--CBX3 3 0 3.00 0.00 INCL_NON_REF_SPLICE CCDC32^ENSG00000128891.16 chr15:40562772:- CBX3^ENSG00000122565.19 chr7:26201769:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2232:22118:23207

&rna_s1221_S42@LH00166:156:2373MLLT3:5:1251:2738:12953

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2225:20371:28126 . YES_LDAS 0.3022 GT 1.8892 AG 1.3383 ["GTEx_recurrent_StarF2019"

INTERCHROMOSOMAL[chr15--chr7]]

WASH5P--WASH6P 3 1 3.00 1.00 ONLY_REF_SPLICE WASH5P^ENSG00000282458.1 chr19:66346:- WASH6P^ENSG00000182484.15 chrX:156021999:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2116:4153:22261

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2155:34952:7217

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1288:29173:19185 &rna_s1221_S42@LH00166:156:2373MLLT3:6:1153:25234:18576 YES_LDAS 0.4029 GT 1.9656 AG 1.8256 ["GTEx_recurrent_StarF2019"

HGNC_GENEFAM

INTERCHROMOSOMAL[chr19--chrX]]

RAP1B--RAP1A 2 0 1.00 0.00 ONLY_REF_SPLICE RAP1B^ENSG00000127314.18 chr12:68657217:+ RAP1A^ENSG00000116473.14 chr1:111703336:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2209:12363:28863

&rna_s1221_S42@LH00166:156:2373MLLT3:6:2125:15368:1160 . NO_LDAS 0.1007 GT 1.9656 AG 1.9219 ["ChimerSeq"

CCLE_StarF2019

INTERCHROMOSOMAL[chr12--chr1]]

NONO--KAT6A 2 0 2.00 0.00 INCL_NON_REF_SPLICE NONO^ENSG00000147140.17 chrX:71290778:+ KAT6A^ENSG00000083168.11 chr8:41933275:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2153:15895:28895

&rna_s1221_S42@LH00166:156:2373MLLT3:6:1157:14841:1336 . NO_LDAS 0.2015 GC 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chrX--chr8]"]

CU633906.2--CIAPIN1 2 0 0.67 0.00 ONLY_REF_SPLICE CU633906.2^ENSG00000278903.3 chr21:6322697:+ CIAPIN1^ENSG00000005194.15 chr16:57429280:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1179:7112:23287

&rna_s1221_S42@LH00166:156:2373MLLT3:7:1256:48137:6736 . YES_LDAS 0.0675 GT 1.9219 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr16]"]

AC009533.1--MIR4307HG 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC009533.1^ENSG00000111788.10 chr12:9310083:+ MIR4307HG^ENSG00000257612.2 chr14:26881418:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1112:41868:1513

&rna_s1221_S42@LH00166:156:2373MLLT3:7:2149:43356:1945 . NO_LDAS 0.2015 GT 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr14]"]

ABI3--IGL-@-ext 2 0 1.00 0.00 INCL_NON_REF_SPLICE ABI3^ENSG00000108798.9 chr17:49222500:+ IGL-@-ext^IGL-.g@-ext chr22:22906790:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2249:43375:8546

&rna_s1221_S42@LH00166:156:2373MLLT3:4:1148:19871:16974 . NO_LDAS 0.1007 GG 0.9056 CA 1.4295 ["INTERCHROMOSOMAL[chr17--chr22]"]

ZNF91--UBXN6 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF91^ENSG00000167232.14 chr19:23395325:- UBXN6^ENSG00000167671.12 chr19:4445623:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1281:47878:18400 . YES_LDAS 0.1007 GT 1.8323 AG 1.4566 ["INTRACHROMOSOMAL[chr19:18.85Mb]"]

ZNF85--CHMP1A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF85^ENSG00000105750.15 chr19:20935047:+ CHMP1A^ENSG00000131165.16 chr16:89647331:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1109:11855:16285 . NO_LDAS 0.1007 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr16]"]

ZNF532--KRIT1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF532^ENSG00000074657.14 chr18:58977668:+ KRIT1^ENSG00000001631.16 chr7:92242137:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2236:21767:13690 . NO_LDAS 0.1007 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr7]"]

ZNF433-AS1--DNAJC5 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF433-AS1^ENSG00000219665.8 chr19:12001822:+ DNAJC5^ENSG00000101152.11 chr20:63928335:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1116:8027:13561 . YES_LDAS 0.1007 GT 1.8295 AG 1.9219 ["INTERCHROMOSOMAL[chr19--chr20]"]

ZMYM4--C9orf85 1 0 1.00 0.00 ONLY_REF_SPLICE ZMYM4^ENSG00000146463.12 chr1:35269085:+ C9orf85^ENSG00000155621.15 chr9:71947006:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2272:49080:1192 . YES_LDAS 0.1007 GT 1.5656 AG 1.3753 ["INTERCHROMOSOMAL[chr1--chr9]"]

ZKSCAN1--PPP2R2D 1 0 1.00 0.00 ONLY_REF_SPLICE ZKSCAN1^ENSG00000106261.17 chr7:100024307:+ PPP2R2D^ENSG00000175470.20 chr10:131934458:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1139:21517:24569 . YES_LDAS 0.1007 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr10]"]

ZFC3H1--CBWD3 1 0 0.33 0.00 INCL_NON_REF_SPLICE ZFC3H1^ENSG00000133858.17 chr12:71663013:- CBWD3^ENSG00000196873.16 chr9:68298918:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1211:4393:22358 . NO_LDAS 0.0332 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr9]"]

ZDHHC13--TSEN2 1 0 1.00 0.00 ONLY_REF_SPLICE ZDHHC13^ENSG00000177054.14 chr11:19117276:+ TSEN2^ENSG00000154743.19 chr3:12489784:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2226:33556:24216 . NO_LDAS 0.1007 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr11--chr3]"]

ZBTB17--PGS1 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB17^ENSG00000116809.12 chr1:15973039:- PGS1^ENSG00000087157.19 chr17:78414879:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2238:49265:8114 . YES_LDAS 0.1007 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr17]"]

WDR70--TTC33 1 0 1.00 0.00 ONLY_REF_SPLICE WDR70^ENSG00000082068.9 chr5:37516590:+ TTC33^ENSG00000113638.14 chr5:40747019:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2291:13824:28286 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr5:2.76Mb]"]

WDR26--CAPN2 1 0 1.00 0.00 ONLY_REF_SPLICE WDR26^ENSG00000162923.17 chr1:224431477:- CAPN2^ENSG00000162909.18 chr1:223759270:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2230:32409:17134 . YES_LDAS 0.1007 GT 1.5656 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.61Mb]"]

WASHC3--CABLES1 1 0 1.00 0.00 ONLY_REF_SPLICE WASHC3^ENSG00000120860.11 chr12:102050189:- CABLES1^ENSG00000134508.12 chr18:23257227:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1245:5558:3035 . NO_LDAS 0.1007 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr12--chr18]"]

VPS37B--CLEC2D 1 0 1.00 0.00 ONLY_REF_SPLICE VPS37B^ENSG00000139722.7 chr12:122895952:- CLEC2D^ENSG00000069493.15 chr12:9687902:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1254:23209:5422 . YES_LDAS 0.1007 GT 1.5628 AG 1.8295 ["INTRACHROMOSOMAL[chr12:113.17Mb]"]

USP6NL--CREM 1 0 1.00 0.00 ONLY_REF_SPLICE USP6NL^ENSG00000148429.14 chr10:11611443:- CREM^ENSG00000095794.19 chr10:35206895:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1270:14712:25145 . YES_LDAS 0.1007 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr10:23.52Mb]"]

USP3--DDX6 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP3^ENSG00000140455.17 chr15:63504792:+ DDX6^ENSG00000110367.13 chr11:118749784:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2258:18152:24248 . YES_LDAS 0.1007 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr11]"]

USP15--ATF1 1 0 1.00 0.00 ONLY_REF_SPLICE USP15^ENSG00000135655.16 chr12:62260503:+ ATF1^ENSG00000123268.9 chr12:50780140:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1124:45067:19458 . YES_LDAS 0.1007 GT 1.7819 AG 1.5656 ["INTRACHROMOSOMAL[chr12:11.44Mb]"]

UQCRH--TSPOAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ TSPOAP1^ENSG00000005379.17 chr17:58309266:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1142:30911:13738 . NO_LDAS 0.1007 GT 1.7968 AG 0.9968 ["INTERCHROMOSOMAL[chr1--chr17]"]

UQCRH--TRIM22 1 0 1.00 0.00 ONLY_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46309127:+ TRIM22^ENSG00000132274.16 chr11:5698315:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1215:10117:3788 . YES_LDAS 0.1007 GT 1.5058 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr11]"]

UPF2--RSU1 1 0 1.00 0.00 ONLY_REF_SPLICE UPF2^ENSG00000151461.20 chr10:12014024:- RSU1^ENSG00000148484.18 chr10:16754989:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1247:14314:5678 . NO_LDAS 0.1007 GT 1.3996 AG 1.8892 ["INTRACHROMOSOMAL[chr10:4.55Mb]"]

UIMC1--SIMC1 1 0 1.00 0.00 ONLY_REF_SPLICE UIMC1^ENSG00000087206.17 chr5:176951474:- SIMC1^ENSG00000170085.18 chr5:176322273:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1220:37550:28158 . YES_LDAS 0.1007 GT 1.7056 AG 1.8256 ["INTRACHROMOSOMAL[chr5:0.56Mb]"]

UBR4--IGH-@-ext 1 0 0.04 0.00 INCL_NON_REF_SPLICE UBR4^ENSG00000127481.15 chr1:19122893:- IGH-@-ext^IGH-.g@-ext chr14:106636688:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2247:28831:1449 . YES_LDAS 0.004 GC 1.9329 CA 1.6402 ["INTERCHROMOSOMAL[chr1--chr14]"]

UBR3--PHIP 1 0 1.00 0.00 ONLY_REF_SPLICE UBR3^ENSG00000144357.18 chr2:169875949:+ PHIP^ENSG00000146247.14 chr6:78990985:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1152:31244:6207 . YES_LDAS 0.1007 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr6]"]

UBQLN1--RPS24 1 0 1.00 0.00 ONLY_REF_SPLICE UBQLN1^ENSG00000135018.14 chr9:83707500:- RPS24^ENSG00000138326.21 chr10:78035352:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2137:18475:14074 . YES_LDAS 0.1007 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr9--chr10]"]

UBL5--SLC9A8 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBL5^ENSG00000198258.11 chr19:9828389:+ SLC9A8^ENSG00000197818.12 chr20:49864728:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1130:5050:5390 . YES_LDAS 0.1007 GC 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr20]"]

UBE2H--MED13 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBE2H^ENSG00000186591.13 chr7:129952503:- MED13^ENSG00000108510.10 chr17:61946140:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2270:50180:23832 . NO_LDAS 0.1007 GT 1.9219 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr17]"]

UBE2E2--TTC39A 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2E2^ENSG00000182247.10 chr3:23217312:+ TTC39A^ENSG00000085831.16 chr1:51321825:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1156:8249:24457 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr1]"]

UBE2E2--DEK 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2E2^ENSG00000182247.10 chr3:23203262:+ DEK^ENSG00000124795.17 chr6:18249839:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2279:40527:18929 . YES_LDAS 0.1007 GT 1.4716 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr6]"]

U2AF1--CFL1 1 0 0.50 0.00 ONLY_REF_SPLICE U2AF1^ENSG00000160201.12 chr21:43095438:- CFL1^ENSG00000172757.13 chr11:65856242:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2169:26029:29728 . YES_LDAS 0.0504 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr21--chr11]"]

TYW1--SLC16A1-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE TYW1^ENSG00000198874.13 chr7:67195337:+ SLC16A1-AS1^ENSG00000226419.8 chr1:112960477:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1111:20519:8963 . YES_LDAS 0.1007 GT 1.6729 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr1]"]

TUBB1P1--TUBB 1 0 0.50 0.00 ONLY_REF_SPLICE TUBB1P1^ENSG00000249726.1 chrY:18387030:+ TUBB^ENSG00000196230.14 chr6:30722537:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1139:30393:17519 . NO_LDAS 0.0504 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chrY--chr6]"]

TTLL11--SMC4 1 0 1.00 0.00 ONLY_REF_SPLICE TTLL11^ENSG00000175764.15 chr9:122031723:- SMC4^ENSG00000113810.16 chr3:160411920:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2136:21610:17551 . YES_LDAS 0.1007 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr3]"]

TTC37--ZSCAN18 1 0 1.00 0.00 INCL_NON_REF_SPLICE TTC37^ENSG00000198677.12 chr5:95543184:- ZSCAN18^ENSG00000121413.13 chr19:58109093:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1228:38641:23351 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr19]"]

TSC22D3--STIL 1 0 1.00 0.00 INCL_NON_REF_SPLICE TSC22D3^ENSG00000157514.16 chrX:107713362:- STIL^ENSG00000123473.16 chr1:47263113:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:2202:51077:13882 . YES_LDAS 0.1007 GT 1.9899 AG 1.6402 ["INTERCHROMOSOMAL[chrX--chr1]"]

TRIOBP--ADCY6 1 0 1.00 0.00 ONLY_REF_SPLICE TRIOBP^ENSG00000100106.22 chr22:37751828:+ ADCY6^ENSG00000174233.12 chr12:48778257:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1128:50273:28831 . YES_LDAS 0.1007 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr12]"]

TRAPPC3--THRAP3 1 0 1.00 0.00 ONLY_REF_SPLICE TRAPPC3^ENSG00000054116.12 chr1:36149337:- THRAP3^ENSG00000054118.15 chr1:36282533:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1108:51391:3820 . YES_LDAS 0.1007 GT 1.5329 AG 1.5656 ["INTRACHROMOSOMAL[chr1:0.07Mb]"

LOCAL_INVERSION:-:+:[68379]]

TRAK1--VPS13B 1 0 1.00 0.00 ONLY_REF_SPLICE TRAK1^ENSG00000182606.17 chr3:42125614:+ VPS13B^ENSG00000132549.19 chr8:99776775:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2160:29913:28029 . YES_LDAS 0.1007 GT 1.8256 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr8]"]

TPTE2--IDS 1 0 0.33 0.00 ONLY_REF_SPLICE TPTE2^ENSG00000132958.17 chr13:19492850:- IDS^ENSG00000010404.18 chrX:149483218:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1148:44549:12023 . NO_LDAS 0.0332 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chrX]"]

TOP2A--MAST4 1 0 0.50 0.00 INCL_NON_REF_SPLICE TOP2A^ENSG00000131747.15 chr17:40389977:- MAST4^ENSG00000069020.18 chr5:67160554:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1160:37041:16285 . NO_LDAS 0.0504 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr5]"]

TNIK--RBM33 1 0 1.00 0.00 ONLY_REF_SPLICE TNIK^ENSG00000154310.17 chr3:171460007:- RBM33^ENSG00000184863.11 chr7:155672867:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1222:51567:23223 . YES_LDAS 0.1007 GT 1.8256 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr7]"]

TNFRSF17--GARRE1 1 0 1.00 0.00 ONLY_REF_SPLICE TNFRSF17^ENSG00000048462.11 chr16:11965454:+ GARRE1^ENSG00000166398.14 chr19:34333704:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2232:1629:28046 . YES_LDAS 0.1007 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr19]"]

TMPRSS2--ERG 1 0 1.00 0.00 ONLY_REF_SPLICE TMPRSS2^ENSG00000184012.14 chr21:41508081:- ERG^ENSG00000157554.19 chr21:38584945:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1156:37494:17968 . NO_LDAS 0.1007 GT 1.6895 AG 1.9219 ["ChimerKB"

Larsson_TCGA

ChimerSeq

TCGA_StarF2019

CCLE_StarF2019

YOSHIHARA_TCGA

chimerdb_pubmed

DEEPEST2019

GUO2018CR_TCGA

ChimerPub

TumorFusionsNAR2018

Cosmic

INTRACHROMOSOMAL[chr21:2.80Mb]]

TMED8--SSU72 1 0 1.00 0.00 ONLY_REF_SPLICE TMED8^ENSG00000100580.8 chr14:77376936:- SSU72^ENSG00000160075.12 chr1:1564916:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1115:19973:9460 . YES_LDAS 0.1007 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr1]"]

TMED3--MINAR1 1 0 1.00 0.00 ONLY_REF_SPLICE TMED3^ENSG00000166557.14 chr15:79314005:+ MINAR1^ENSG00000169330.9 chr15:79456098:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1266:30689:11527 . YES_LDAS 0.1007 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.00Mb]"

NEIGHBORS[4904]]

TMC8--AC093766.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TMC8^ENSG00000167895.15 chr17:78133930:+ AC093766.1^ENSG00000250501.3 chr4:138801874:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2236:14592:10165 . NO_LDAS 0.0504 AT 1.8323 AC 1.9086 ["INTERCHROMOSOMAL[chr17--chr4]"]

TM2D3--MDM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TM2D3^ENSG00000184277.13 chr15:101636649:- MDM2^ENSG00000135679.25 chr12:68828898:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1241:33204:21845 . NO_LDAS 0.1007 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr12]"]

TELO2--AP000919.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TELO2^ENSG00000100726.15 chr16:1494391:+ AP000919.3^ENSG00000272625.1 chr18:2921131:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2146:52103:2939 . NO_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr18]"]

TBC1D22A--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D22A^ENSG00000054611.14 chr22:47111603:+ ZADH2^ENSG00000180011.7 chr18:75202340:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1202:20694:27052 . YES_LDAS 0.1007 GT 1.6402 AG 1.4566 ["INTERCHROMOSOMAL[chr22--chr18]"]

TAX1BP1--GOLPH3 1 0 1.00 0.00 ONLY_REF_SPLICE TAX1BP1^ENSG00000106052.13 chr7:27800090:+ GOLPH3^ENSG00000113384.14 chr5:32126636:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2124:33898:23976 . YES_LDAS 0.1007 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr5]"]

TANGO2--GTPBP1 1 0 1.00 0.00 ONLY_REF_SPLICE TANGO2^ENSG00000183597.16 chr22:20043443:+ GTPBP1^ENSG00000100226.16 chr22:38715907:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2144:23875:18176 . YES_LDAS 0.1007 GT 1.9899 AG 1.8062 ["INTRACHROMOSOMAL[chr22:18.64Mb]"]

TACC3--DDB1 1 0 0.33 0.00 INCL_NON_REF_SPLICE TACC3^ENSG00000013810.20 chr4:1745062:+ DDB1^ENSG00000167986.15 chr11:61301770:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1181:3644:5262 . NO_LDAS 0.0332 GT 1.5219 AG 1.0530 ["INTERCHROMOSOMAL[chr4--chr11]"]

SUCO--AAGAB 1 0 1.00 0.00 ONLY_REF_SPLICE SUCO^ENSG00000094975.14 chr1:172579267:+ AAGAB^ENSG00000103591.13 chr15:67236820:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1143:42543:23832 . NO_LDAS 0.1007 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr15]"]

SUCLG2-AS1--TAFA1 1 0 1.00 0.00 ONLY_REF_SPLICE SUCLG2-AS1^ENSG00000241316.8 chr3:67671004:+ TAFA1^ENSG00000183662.11 chr3:68006624:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1285:30024:18448 . YES_LDAS 0.1007 GT 1.6895 AG 1.9086 ["INTRACHROMOSOMAL[chr3:0.06Mb]"

NEIGHBORS[56534]]

STX2--MRPS35 1 0 1.00 0.00 ONLY_REF_SPLICE STX2^ENSG00000111450.14 chr12:130798525:- MRPS35^ENSG00000061794.13 chr12:27755181:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1244:1749:21589 . YES_LDAS 0.1007 GT 1.4295 AG 1.7465 ["INTRACHROMOSOMAL[chr12:103.03Mb]"]

STOML2--OSBP 1 0 1.00 0.00 INCL_NON_REF_SPLICE STOML2^ENSG00000165283.16 chr9:35099906:- OSBP^ENSG00000110048.12 chr11:59615677:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2230:23875:27565 . YES_LDAS 0.1007 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr11]"]

STAT6--IGH-@-ext 1 0 0.33 0.00 INCL_NON_REF_SPLICE STAT6^ENSG00000166888.12 chr12:57096955:- IGH-@-ext^IGH-.g@-ext chr14:106319563:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2253:26196:29087 . NO_LDAS 0.0332 GG 1.7968 AT 1.7232 ["INTERCHROMOSOMAL[chr12--chr14]"]

ST3GAL2--PLCXD1 1 0 1.00 0.00 ONLY_REF_SPLICE ST3GAL2^ENSG00000157350.13 chr16:70438949:- PLCXD1^ENSG00000182378.15 chrX:284167:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1289:35090:13417 . YES_LDAS 0.1007 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chrX]"]

SRSF4--GSTCD 1 0 1.00 0.00 ONLY_REF_SPLICE SRSF4^ENSG00000116350.17 chr1:29181646:- GSTCD^ENSG00000138780.15 chr4:105717593:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1125:47221:16173 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr4]"]

SREBF1--FAM222B 1 0 1.00 0.00 ONLY_REF_SPLICE SREBF1^ENSG00000072310.17 chr17:17836727:- FAM222B^ENSG00000173065.13 chr17:28766707:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2205:43856:27933 . YES_LDAS 0.1007 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr17:10.92Mb]"]

SPTAN1--HNRNPC 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPTAN1^ENSG00000197694.18 chr9:128632478:+ HNRNPC^ENSG00000092199.18 chr14:21263579:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1291:45159:2186 . YES_LDAS 0.1007 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr9--chr14]"]

SPCS1--LINC01541 1 0 0.50 0.00 INCL_NON_REF_SPLICE SPCS1^ENSG00000114902.14 chr3:52706675:+ LINC01541^ENSG00000260676.5 chr18:71520998:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1270:34138:15292 . NO_LDAS 0.0504 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr18]"]

SPCS1--AC097375.5 1 0 0.50 0.00 INCL_NON_REF_SPLICE SPCS1^ENSG00000114902.14 chr3:52706675:+ AC097375.5^ENSG00000286720.1 chr4:152018533:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1270:34138:15292 . NO_LDAS 0.0504 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr4]"]

SP110--AL356273.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SP110^ENSG00000135899.19 chr2:230185994:- AL356273.2^ENSG00000238061.2 chr1:185281798:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1176:35470:6544 . NO_LDAS 0.1007 GT 1.8892 AG 0.9183 ["INTERCHROMOSOMAL[chr2--chr1]"]

SOX5--PAPOLA 1 0 1.00 0.00 ONLY_REF_SPLICE SOX5^ENSG00000134532.19 chr12:24213343:- PAPOLA^ENSG00000090060.18 chr14:96562819:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1143:26455:1272 . YES_LDAS 0.1007 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr14]"]

SOS1--TAF15 1 0 1.00 0.00 ONLY_REF_SPLICE SOS1^ENSG00000115904.14 chr2:39120336:- TAF15^ENSG00000270647.6 chr17:35834566:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2202:1758:5326 . NO_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr17]"]

SORD2P--AKR1B15 1 0 0.50 0.00 ONLY_REF_SPLICE SORD2P^ENSG00000259479.6 chr15:44828450:- AKR1B15^ENSG00000227471.9 chr7:134564598:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1170:20639:16157 . YES_LDAS 0.0504 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr7]"]

SORD2P--AC007317.1 1 0 0.50 0.00 ONLY_REF_SPLICE SORD2P^ENSG00000259479.6 chr15:44828450:- AC007317.1^ENSG00000285898.1 chr2:40677586:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1170:20639:16157 . YES_LDAS 0.0504 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr2]"]

SOCS5--TTC7A 1 0 1.00 0.00 ONLY_REF_SPLICE SOCS5^ENSG00000171150.9 chr2:46699449:+ TTC7A^ENSG00000068724.17 chr2:46993450:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1246:18226:9380 . YES_LDAS 0.1007 GT 1.4566 AG 1.8323 ["INTRACHROMOSOMAL[chr2:0.14Mb]"]

SNX5--SRPK2 1 0 1.00 0.00 ONLY_REF_SPLICE SNX5^ENSG00000089006.17 chr20:17968375:- SRPK2^ENSG00000135250.17 chr7:105203785:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1272:2082:7201 . YES_LDAS 0.1007 GT 1.5656 AG 1.8062 ["INTERCHROMOSOMAL[chr20--chr7]"]

SNU13--LLPH 1 0 1.00 0.00 ONLY_REF_SPLICE SNU13^ENSG00000100138.15 chr22:41680244:- LLPH^ENSG00000139233.7 chr12:66129113:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2239:33140:22598 . YES_LDAS 0.1007 GT 1.7056 AG 1.8295 ["INTERCHROMOSOMAL[chr22--chr12]"]

SNRNP200--WIZ 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNRNP200^ENSG00000144028.15 chr2:96291751:- WIZ^ENSG00000011451.21 chr19:15422830:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2180:2248:20179 . YES_LDAS 0.1007 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr2--chr19]"]

SNRNP200--RARS1 1 0 1.00 0.00 ONLY_REF_SPLICE SNRNP200^ENSG00000144028.15 chr2:96285180:- RARS1^ENSG00000113643.9 chr5:168488602:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2244:50920:16782 . YES_LDAS 0.1007 GT 1.7819 AG 1.3383 ["INTERCHROMOSOMAL[chr2--chr5]"]

SNORD3A--RPS3A 1 0 0.13 0.00 INCL_NON_REF_SPLICE SNORD3A^ENSG00000263934.5 chr17:19188110:+ RPS3A^ENSG00000145425.10 chr4:151102901:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2128:18956:8498 . YES_LDAS 0.0131 GT 1.5628 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr4]"]

SNHG8--VEZT 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG8^ENSG00000269893.8 chr4:118279137:+ VEZT^ENSG00000028203.18 chr12:95282313:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2247:42201:19746 . NO_LDAS 0.1007 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr12]"]

SNHG21--ZNF592 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG21^ENSG00000250988.7 chr15:82754784:+ ZNF592^ENSG00000166716.10 chr15:84782657:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2105:4347:23047 . YES_LDAS 0.1007 GT 1.6729 AG 1.7232 ["INTRACHROMOSOMAL[chr15:1.99Mb]"]

SMIM4--CAPRIN1 1 0 1.00 0.00 ONLY_REF_SPLICE SMIM4^ENSG00000168273.8 chr3:52536906:+ CAPRIN1^ENSG00000135387.21 chr11:34071726:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1178:42136:27453 . YES_LDAS 0.1007 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr11]"]

SMG1--NPIPB12 1 0 0.50 0.00 INCL_NON_REF_SPLICE SMG1^ENSG00000157106.17 chr16:18858170:- NPIPB12^ENSG00000169203.16 chr16:29505872:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1291:38447:5550 . NO_LDAS 0.0504 GT 1.4566 AG 1.9329 ["GTEx_recurrent_StarF2019"

INTRACHROMOSOMAL[chr16:10.56Mb]]

SMARCA4--SCARF2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMARCA4^ENSG00000127616.19 chr19:10989332:+ SCARF2^ENSG00000244486.9 chr22:20425455:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1174:9682:12071 . NO_LDAS 0.1007 GC 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr22]"]

SLC7A5P1--SMG1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC7A5P1^ENSG00000260727.2 chr16:29613103:- SMG1^ENSG00000157106.17 chr16:18900044:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1125:2646:2538 . YES_LDAS 0.1007 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr16:10.69Mb]"]

SLC52A2--ESRRA 1 0 1.00 0.00 ONLY_REF_SPLICE SLC52A2^ENSG00000185803.12 chr8:144359423:+ ESRRA^ENSG00000173153.17 chr11:64307168:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2250:9830:17871 . YES_LDAS 0.1007 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr11]"]

SLC3A2--CKAP5 1 0 1.00 0.00 ONLY_REF_SPLICE SLC3A2^ENSG00000168003.18 chr11:62856381:+ CKAP5^ENSG00000175216.15 chr11:46760784:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2224:25974:6784 . YES_LDAS 0.1007 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr11:16.01Mb]"]

SLC35F2--NLGN4Y 1 0 1.00 0.00 ONLY_REF_SPLICE SLC35F2^ENSG00000110660.15 chr11:107858658:- NLGN4Y^ENSG00000165246.14 chrY:14719459:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2242:11698:11623 . YES_LDAS 0.1007 GT 1.8062 AG 1.5546 ["INTERCHROMOSOMAL[chr11--chrY]"]

SHOX2--LHX4 1 0 1.00 0.00 ONLY_REF_SPLICE SHOX2^ENSG00000168779.20 chr3:158102678:- LHX4^ENSG00000121454.6 chr1:180271835:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1216:50476:5855 . NO_LDAS 0.1007 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr1]"]

SH3GLB2--DISC1 1 0 1.00 0.00 ONLY_REF_SPLICE SH3GLB2^ENSG00000148341.18 chr9:129021091:- DISC1^ENSG00000162946.23 chr1:231854739:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1217:50374:11639 . NO_LDAS 0.1007 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr1]"]

SH3GL1--SAFB2 1 0 1.00 0.00 ONLY_REF_SPLICE SH3GL1^ENSG00000141985.9 chr19:4400324:- SAFB2^ENSG00000130254.12 chr19:5600260:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1255:29423:19041 . NO_LDAS 0.1007 GT 1.8256 AG 1.6402 ["INTRACHROMOSOMAL[chr19:1.19Mb]"]

SETX--ISCA1 1 0 1.00 0.00 ONLY_REF_SPLICE SETX^ENSG00000107290.14 chr9:132334608:- ISCA1^ENSG00000135070.15 chr9:86267805:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1297:39344:12872 . NO_LDAS 0.1007 GT 1.5628 AG 1.7232 ["INTRACHROMOSOMAL[chr9:45.98Mb]"]

SETD1B--UNC119B 1 0 1.00 0.00 ONLY_REF_SPLICE SETD1B^ENSG00000139718.11 chr12:121817904:+ UNC119B^ENSG00000175970.11 chr12:120719920:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1218:39242:20131 . YES_LDAS 0.1007 GT 1.7968 AG 1.8295 ["INTRACHROMOSOMAL[chr12:1.08Mb]"]

SEPTIN14--AP006222.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AP006222.1^ENSG00000228463.10 chr1:289370:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1262:43597:1721 . YES_LDAS 0.1007 GT 1.5546 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr1]"]

SEPTIN14--AL031259.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AL031259.1^ENSG00000287411.1 chr6:170614324:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2189:39538:9300 . YES_LDAS 0.1007 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr6]"]

SEPSECS--CYP7B1 1 0 1.00 0.00 ONLY_REF_SPLICE SEPSECS^ENSG00000109618.13 chr4:25160256:- CYP7B1^ENSG00000172817.4 chr8:64624539:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2263:50171:27212 . YES_LDAS 0.1007 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr8]"]

SENP3--KIF2A 1 0 1.00 0.00 ONLY_REF_SPLICE SENP3^ENSG00000161956.13 chr17:7570933:+ KIF2A^ENSG00000068796.19 chr5:62347130:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1123:13602:1433 . YES_LDAS 0.1007 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr5]"]

SELENOF--RPL32 1 0 0.50 0.00 INCL_NON_REF_SPLICE SELENOF^ENSG00000183291.17 chr1:86863490:- RPL32^ENSG00000144713.13 chr3:12836223:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2294:38604:13962 . YES_LDAS 0.0504 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr3]"]

SEC31A--ARHGAP15 1 0 1.00 0.00 ONLY_REF_SPLICE SEC31A^ENSG00000138674.17 chr4:82844386:- ARHGAP15^ENSG00000075884.14 chr2:143519266:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2231:46463:15308 . YES_LDAS 0.1007 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr2]"]

SDHA--CLPTM1L 1 0 0.50 0.00 ONLY_REF_SPLICE SDHA^ENSG00000073578.17 chr5:236599:+ CLPTM1L^ENSG00000049656.14 chr5:1334383:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1154:40897:17583 . YES_LDAS 0.0504 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr5:1.06Mb]"]

SAMD5--SASH1 1 0 1.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ SASH1^ENSG00000111961.18 chr6:148390134:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2173:33888:13738 . NO_LDAS 0.1007 GT 1.8295 AG 1.9219 ["HGNC_GENEFAM"

INTRACHROMOSOMAL[chr6:0.70Mb]]

SAMD12--TAF2 1 0 1.00 0.00 ONLY_REF_SPLICE SAMD12^ENSG00000177570.15 chr8:118580715:- TAF2^ENSG00000064313.12 chr8:119746934:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1283:20879:9492 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr8:1.11Mb]"]

RSRP1--MTRF1 1 0 1.00 0.00 ONLY_REF_SPLICE RSRP1^ENSG00000117616.18 chr1:25245150:- MTRF1^ENSG00000120662.16 chr13:41260915:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2164:13168:13497 . YES_LDAS 0.1007 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr13]"]

RSF1--USP14 1 0 1.00 0.00 ONLY_REF_SPLICE RSF1^ENSG00000048649.13 chr11:77820528:- USP14^ENSG00000101557.15 chr18:196637:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2216:1740:23720 . YES_LDAS 0.1007 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr18]"]

RRAS2--HERC1 1 0 1.00 0.00 ONLY_REF_SPLICE RRAS2^ENSG00000133818.14 chr11:14358763:- HERC1^ENSG00000103657.14 chr15:63775649:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1268:35322:12888 . YES_LDAS 0.1007 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr15]"]

RPS6KA1--ARID1A 1 0 1.00 0.00 ONLY_REF_SPLICE RPS6KA1^ENSG00000117676.14 chr1:26536969:+ ARID1A^ENSG00000117713.20 chr1:26729651:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2297:12400:1881 . YES_LDAS 0.1007 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.12Mb]"]

RPS4X--TBL1XR1 1 0 1.00 0.00 ONLY_REF_SPLICE RPS4X^ENSG00000198034.11 chrX:72275053:- TBL1XR1^ENSG00000177565.18 chr3:177046189:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1154:25493:20403 . YES_LDAS 0.1007 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chrX--chr3]"]

RPRD1A--PIGF 1 0 1.00 0.00 ONLY_REF_SPLICE RPRD1A^ENSG00000141425.18 chr18:36067254:- PIGF^ENSG00000151665.13 chr2:46581591:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1124:48433:18785 . YES_LDAS 0.1007 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr2]"]

RPL4--SLC39A7 1 0 1.00 0.00 ONLY_REF_SPLICE RPL4^ENSG00000174444.15 chr15:66503058:- SLC39A7^ENSG00000112473.18 chr6:33201745:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1113:45465:11911 . YES_LDAS 0.1007 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr6]"]

RPL29--MAP3K5 1 0 0.50 0.00 INCL_NON_REF_SPLICE RPL29^ENSG00000162244.12 chr3:51993896:- MAP3K5^ENSG00000197442.10 chr6:136613172:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2272:51216:28606 . YES_LDAS 0.0504 AT 1.5656 AC 1.5301 ["INTERCHROMOSOMAL[chr3--chr6]"]

RPL27A--RPL12 1 0 1.00 0.00 ONLY_REF_SPLICE RPL27A^ENSG00000166441.13 chr11:8684892:+ RPL12^ENSG00000197958.13 chr9:127449708:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1234:50975:15724 . YES_LDAS 0.1007 GT 1.7968 AG 1.7465 ["HGNC_GENEFAM"

INTERCHROMOSOMAL[chr11--chr9]]

RPL23AP53--SEPTIN14 1 0 1.00 0.00 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:230804:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2178:16755:13273 . NO_LDAS 0.1007 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"]

RPL23--ZBTB1 1 0 1.00 0.00 ONLY_REF_SPLICE RPL23^ENSG00000125691.14 chr17:38853022:- ZBTB1^ENSG00000126804.13 chr14:64521487:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2254:20223:19826 . YES_LDAS 0.1007 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr14]"]

RPL12--CNTROB 1 0 1.00 0.00 ONLY_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127449281:- CNTROB^ENSG00000170037.14 chr17:7945728:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1111:40703:10261 . NO_LDAS 0.1007 GT 1.1033 AG 1.8062 ["INTERCHROMOSOMAL[chr9--chr17]"]

ROCK1--UNC50 1 0 0.50 0.00 ONLY_REF_SPLICE ROCK1^ENSG00000067900.8 chr18:20953578:- UNC50^ENSG00000115446.12 chr2:98609756:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1107:32085:1673 . YES_LDAS 0.0504 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr2]"]

RNVU1-27--AGO2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNVU1-27^ENSG00000274210.1 chr1:148522796:+ AGO2^ENSG00000123908.12 chr8:140585311:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1157:12918:19313 . YES_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr8]"]

RILPL2--RAB35 1 0 1.00 0.00 ONLY_REF_SPLICE RILPL2^ENSG00000150977.11 chr12:123423044:- RAB35^ENSG00000111737.12 chr12:120108467:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1146:49625:21268 . YES_LDAS 0.1007 GT 1.5546 AG 1.7968 ["INTRACHROMOSOMAL[chr12:3.30Mb]"]

RIC1--PTK2B 1 0 1.00 0.00 ONLY_REF_SPLICE RIC1^ENSG00000107036.12 chr9:5656690:+ PTK2B^ENSG00000120899.18 chr8:27397548:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1239:29302:24152 . YES_LDAS 0.1007 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr8]"]

RERE--SEPTIN6 1 0 1.00 0.00 ONLY_REF_SPLICE RERE^ENSG00000142599.19 chr1:8817160:- SEPTIN6^ENSG00000125354.24 chrX:119675668:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2146:11226:22213 . YES_LDAS 0.1007 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chrX]"]

RCC1--ZFAND3 1 0 1.00 0.00 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ ZFAND3^ENSG00000156639.12 chr6:37929959:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2263:17430:19153 . NO_LDAS 0.1007 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr6]"]

RCC1--MED23 1 0 1.00 0.00 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ MED23^ENSG00000112282.18 chr6:131603204:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1152:46463:29087 . YES_LDAS 0.1007 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr6]"]

RCC1--MAPKAPK5 1 0 1.00 0.00 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508905:+ MAPKAPK5^ENSG00000089022.14 chr12:111888488:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2256:9248:15740 . YES_LDAS 0.1007 GT 1.4295 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr12]"]

RCC1--LRRFIP1 1 0 1.00 0.00 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ LRRFIP1^ENSG00000124831.19 chr2:237772081:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1243:33741:15596 . NO_LDAS 0.1007 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr2]"]

RCC1--CCDC18 1 0 1.00 0.00 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ CCDC18^ENSG00000122483.17 chr1:93246105:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1109:9423:6271 . YES_LDAS 0.1007 GT 1.7968 AG 1.6895 ["INTRACHROMOSOMAL[chr1:64.64Mb]"]

RBM6--NPIPB11 1 0 0.17 0.00 ONLY_REF_SPLICE RBM6^ENSG00000004534.15 chr3:49962685:+ NPIPB11^ENSG00000254206.5 chr16:29394076:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2220:7241:16686 . YES_LDAS 0.0171 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr16]"]

RAP1GDS1--HMGB1 1 0 0.50 0.00 ONLY_REF_SPLICE RAP1GDS1^ENSG00000138698.15 chr4:98293515:+ HMGB1^ENSG00000189403.15 chr13:30463694:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1167:35368:12456 . YES_LDAS 0.0504 GT 1.9086 AG 1.1033 ["INTERCHROMOSOMAL[chr4--chr13]"]

RALGDS--AC003077.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RALGDS^ENSG00000160271.16 chr9:133105932:- AC003077.1^ENSG00000287011.1 chr7:111761245:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1167:38243:29007 . YES_LDAS 0.1007 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr7]"]

RABGAP1--GEN1 1 0 1.00 0.00 ONLY_REF_SPLICE RABGAP1^ENSG00000011454.18 chr9:123020459:+ GEN1^ENSG00000178295.15 chr2:17759929:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1123:50938:17775 . YES_LDAS 0.1007 GT 1.7819 AG 1.7968 ["INTERCHROMOSOMAL[chr9--chr2]"]

RAB3GAP1--SMARCAL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB3GAP1^ENSG00000115839.18 chr2:135113241:+ SMARCAL1^ENSG00000138375.13 chr2:216450979:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1132:21970:14811 . NO_LDAS 0.1007 GT 1.6402 AG 1.9329 ["INTRACHROMOSOMAL[chr2:81.24Mb]"]

RAB35--BAG2 1 0 1.00 0.00 ONLY_REF_SPLICE RAB35^ENSG00000111737.12 chr12:120103826:- BAG2^ENSG00000112208.11 chr6:57182032:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1143:36588:28991 . YES_LDAS 0.1007 GT 1.3383 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr6]"]

PYGO2--HOXA11 1 0 0.50 0.00 INCL_NON_REF_SPLICE PYGO2^ENSG00000163348.4 chr1:154959264:- HOXA11^ENSG00000005073.6 chr7:27182433:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2172:15415:19570 . NO_LDAS 0.0504 GT 1.8323 AG 1.3753 ["INTERCHROMOSOMAL[chr1--chr7]"]

PUM1--SLC30A3 1 0 0.50 0.00 INCL_NON_REF_SPLICE PUM1^ENSG00000134644.16 chr1:30965982:- SLC30A3^ENSG00000115194.11 chr2:27255169:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1269:51586:4669 . NO_LDAS 0.0504 GT 1.8892 AG 1.4256 ["INTERCHROMOSOMAL[chr1--chr2]"]

PUM1--CNTNAP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE PUM1^ENSG00000134644.16 chr1:30965982:- CNTNAP1^ENSG00000108797.12 chr17:42698816:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1269:51586:4669 . NO_LDAS 0.0504 GT 1.8892 AG 1.4256 ["INTERCHROMOSOMAL[chr1--chr17]"]

PTPN6--PTPRU 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN6^ENSG00000111679.17 chr12:6956568:+ PTPRU^ENSG00000060656.20 chr1:29315372:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1196:30523:11174 . NO_LDAS 0.1007 GT 1.6402 AG 1.2867 ["INTERCHROMOSOMAL[chr12--chr1]"]

PTBP3--TXN 1 0 1.00 0.00 ONLY_REF_SPLICE PTBP3^ENSG00000119314.16 chr9:112333470:- TXN^ENSG00000136810.13 chr9:110244843:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:2183:31743:16846 . NO_LDAS 0.1007 GT 1.8295 AG 1.9086 ["INTRACHROMOSOMAL[chr9:1.96Mb]"]

PSME3--PPM1M 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSME3^ENSG00000131467.11 chr17:42834380:+ PPM1M^ENSG00000164088.18 chr3:52247185:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1219:50559:9492 . NO_LDAS 0.1007 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr3]"]

PRKDC--NAPG 1 0 1.00 0.00 ONLY_REF_SPLICE PRKDC^ENSG00000253729.8 chr8:47839148:- NAPG^ENSG00000134265.13 chr18:10534466:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2234:24254:10758 . YES_LDAS 0.1007 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr18]"]

PRKAA1--FTO 1 0 1.00 0.00 ONLY_REF_SPLICE PRKAA1^ENSG00000132356.11 chr5:40764514:- FTO^ENSG00000140718.21 chr16:53844155:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2240:34989:5134 . YES_LDAS 0.1007 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr16]"]

PPTC7--TNFAIP3 1 0 1.00 0.00 ONLY_REF_SPLICE PPTC7^ENSG00000196850.6 chr12:110582809:- TNFAIP3^ENSG00000118503.15 chr6:137871213:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1233:34730:16477 . NO_LDAS 0.1007 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr6]"]

PPP3CA--NFKB1 1 0 1.00 0.00 ONLY_REF_SPLICE PPP3CA^ENSG00000138814.17 chr4:101346739:- NFKB1^ENSG00000109320.13 chr4:102566987:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2135:39603:11046 . YES_LDAS 0.1007 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr4:1.15Mb]"]

PPP2R5D--FZR1 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R5D^ENSG00000112640.16 chr6:42989688:+ FZR1^ENSG00000105325.15 chr19:3525868:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2128:23505:12344 . YES_LDAS 0.1007 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr19]"]

PPP2R2A--TNKS 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R2A^ENSG00000221914.11 chr8:26293740:+ TNKS^ENSG00000173273.16 chr8:9580159:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2278:2405:18753 . NO_LDAS 0.1007 GT 1.7819 AG 1.5301 ["INTRACHROMOSOMAL[chr8:16.51Mb]"]

PPP2CA--AL391730.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPP2CA^ENSG00000113575.10 chr5:134199086:- AL391730.1^ENSG00000228940.1 chr1:40939661:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2210:14925:15420 . NO_LDAS 0.1007 GT 1.5058 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr1]"]

PPP1R9B--ANAPC16 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPP1R9B^ENSG00000108819.11 chr17:50143605:- ANAPC16^ENSG00000166295.9 chr10:72220167:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2193:24383:24569 . YES_LDAS 0.1007 AT 1.6895 AC 1.4716 ["INTERCHROMOSOMAL[chr17--chr10]"]

PPP1R21--ARHGAP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPP1R21^ENSG00000162869.16 chr2:48486758:+ ARHGAP5^ENSG00000100852.13 chr14:32154196:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2101:18660:16253 . YES_LDAS 0.1007 GT 1.5628 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr14]"]

POU5F1--TYW1 1 0 1.00 0.00 ONLY_REF_SPLICE POU5F1^ENSG00000204531.20 chr6:31166534:- TYW1^ENSG00000198874.13 chr7:67067285:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1198:37957:23479 . YES_LDAS 0.1007 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr7]"]

POLR2J2--TCP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE POLR2J2^ENSG00000228049.7 chr7:102665662:- TCP1^ENSG00000120438.12 chr6:159788143:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2129:18189:9380 . YES_LDAS 0.0504 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr6]"]

POLE--ADRM1 1 0 1.00 0.00 ONLY_REF_SPLICE POLE^ENSG00000177084.18 chr12:132687254:- ADRM1^ENSG00000130706.13 chr20:62304461:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2132:38669:23399 . YES_LDAS 0.1007 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr20]"]

PLCG2--AAK1 1 0 1.00 0.00 ONLY_REF_SPLICE PLCG2^ENSG00000197943.10 chr16:81786182:+ AAK1^ENSG00000115977.21 chr2:69544544:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:2102:50152:10229 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr2]"]

PKM--MYBL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PKM^ENSG00000067225.19 chr15:72208749:- MYBL2^ENSG00000101057.16 chr20:43686999:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1248:33287:12055 . YES_LDAS 0.1007 GT 1.7232 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr20]"]

PKIG--BIRC6 1 0 1.00 0.00 ONLY_REF_SPLICE PKIG^ENSG00000168734.14 chr20:44589866:+ BIRC6^ENSG00000115760.14 chr2:32607455:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1274:7814:3003 . YES_LDAS 0.1007 GT 1.6049 AG 1.4295 ["INTERCHROMOSOMAL[chr20--chr2]"]

PIK3CB--POTEG 1 0 0.20 0.00 INCL_NON_REF_SPLICE PIK3CB^ENSG00000051382.9 chr3:138684664:- POTEG^ENSG00000187537.13 chr14:19402587:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2129:50605:28606 . NO_LDAS 0.0201 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr3--chr14]"]

PIK3CB--ACTBL2 1 0 0.20 0.00 INCL_NON_REF_SPLICE PIK3CB^ENSG00000051382.9 chr3:138684664:- ACTBL2^ENSG00000169067.4 chr5:57482383:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2129:50605:28606 . NO_LDAS 0.0201 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr3--chr5]"]

PIK3CB--ACTA2 1 0 0.20 0.00 INCL_NON_REF_SPLICE PIK3CB^ENSG00000051382.9 chr3:138684664:- ACTA2^ENSG00000107796.13 chr10:88943838:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2129:50605:28606 . NO_LDAS 0.0201 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr3--chr10]"]

PHIP--EZR 1 0 1.00 0.00 ONLY_REF_SPLICE PHIP^ENSG00000146247.14 chr6:79077448:- EZR^ENSG00000092820.18 chr6:158789371:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2211:5031:24072 . NO_LDAS 0.1007 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr6:79.69Mb]"]

PHB2--KREMEN2 1 0 1.00 0.00 ONLY_REF_SPLICE PHB2^ENSG00000215021.10 chr12:6970196:- KREMEN2^ENSG00000131650.14 chr16:2966140:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1292:10274:12328 . YES_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr16]"]

PHACTR4--SRP9 1 0 0.50 0.00 ONLY_REF_SPLICE PHACTR4^ENSG00000204138.13 chr1:28369825:+ SRP9^ENSG00000143742.14 chr1:225777935:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2240:45557:21941 . YES_LDAS 0.0504 GT 1.7232 AG 1.7819 ["INTRACHROMOSOMAL[chr1:197.28Mb]"]

PELI1--RGPD5 1 0 0.33 0.00 ONLY_REF_SPLICE PELI1^ENSG00000197329.12 chr2:64108240:- RGPD5^ENSG00000015568.13 chr2:109819696:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2278:33001:3419 . NO_LDAS 0.0332 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr2:45.65Mb]"]

PEBP1--ABCA17P 1 0 1.00 0.00 INCL_NON_REF_SPLICE PEBP1^ENSG00000089220.5 chr12:118144709:+ ABCA17P^ENSG00000238098.9 chr16:2361116:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1180:9368:13962 . YES_LDAS 0.1007 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr16]"]

PDZD8--YY1 1 0 1.00 0.00 ONLY_REF_SPLICE PDZD8^ENSG00000165650.12 chr10:117374356:- YY1^ENSG00000100811.14 chr14:100262304:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1162:4088:14555 . YES_LDAS 0.1007 GT 1.8295 AG 1.1033 ["INTERCHROMOSOMAL[chr10--chr14]"]

PDSS1--ANKRD26 1 0 1.00 0.00 ONLY_REF_SPLICE PDSS1^ENSG00000148459.16 chr10:26709768:+ ANKRD26^ENSG00000107890.17 chr10:27093799:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1225:4837:2266 . YES_LDAS 0.1007 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr10:0.23Mb]"]

PDE7A--ZFAND3 1 0 1.00 0.00 ONLY_REF_SPLICE PDE7A^ENSG00000205268.11 chr8:65747652:- ZFAND3^ENSG00000156639.12 chr6:38061593:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1102:15461:24296 . NO_LDAS 0.1007 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr8--chr6]"]

PDCD6--WARS1 1 0 1.00 0.00 ONLY_REF_SPLICE PDCD6^ENSG00000249915.8 chr5:311402:+ WARS1^ENSG00000140105.18 chr14:100342571:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1287:28563:16429 . NO_LDAS 0.1007 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr14]"]

PDCD1--UBE2I 1 0 1.00 0.00 ONLY_REF_SPLICE PDCD1^ENSG00000188389.11 chr2:241858763:- UBE2I^ENSG00000103275.21 chr16:1314020:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1224:13492:17102 . YES_LDAS 0.1007 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr16]"]

PCNT--PHC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCNT^ENSG00000160299.17 chr21:46432181:+ PHC2^ENSG00000134686.18 chr1:33430995:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1144:40546:8835 . NO_LDAS 0.1007 GT 1.7465 AG 1.4566 ["INTERCHROMOSOMAL[chr21--chr1]"]

PCDHGC3--DENND1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCDHGC3^ENSG00000240184.7 chr5:141477772:+ DENND1A^ENSG00000119522.16 chr9:123380770:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2115:51012:19121 . NO_LDAS 0.1007 GT 1.6895 AG 1.4256 ["INTERCHROMOSOMAL[chr5--chr9]"]

PBX3--MAPKAP1 1 0 1.00 0.00 ONLY_REF_SPLICE PBX3^ENSG00000167081.18 chr9:125748623:+ MAPKAP1^ENSG00000119487.17 chr9:125657799:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2292:32465:10245 . YES_LDAS 0.1007 GT 1.5546 AG 1.9656 ["TCGA_StarF2019"

INTRACHROMOSOMAL[chr9:0.04Mb]

LOCAL_INVERSION:+:-:[40111]]

PAX5--ATXN10 1 0 1.00 0.00 ONLY_REF_SPLICE PAX5^ENSG00000196092.14 chr9:36923355:- ATXN10^ENSG00000130638.17 chr22:45689712:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1158:26492:29375 . YES_LDAS 0.1007 GT 1.9656 AG 1.5058 ["INTERCHROMOSOMAL[chr9--chr22]"]

PATL2--RECQL5 1 0 1.00 0.00 INCL_NON_REF_SPLICE PATL2^ENSG00000229474.7 chr15:44665816:- RECQL5^ENSG00000108469.15 chr17:75666571:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2261:11568:26299 . YES_LDAS 0.1007 AT 1.2729 AC 1.8892 ["INTERCHROMOSOMAL[chr15--chr17]"]

PARP1--POLR3C 1 0 1.00 0.00 INCL_NON_REF_SPLICE PARP1^ENSG00000143799.14 chr1:226385573:- POLR3C^ENSG00000186141.9 chr1:145842418:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2257:47453:18881 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr1:80.52Mb]"]

PANK2--RAD17 1 0 1.00 0.00 ONLY_REF_SPLICE PANK2^ENSG00000125779.23 chr20:3917050:+ RAD17^ENSG00000152942.19 chr5:69400049:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2203:13602:17743 . YES_LDAS 0.1007 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr5]"]

OTUD7B--CSNK1A1 1 0 1.00 0.00 ONLY_REF_SPLICE OTUD7B^ENSG00000264522.6 chr1:150010448:- CSNK1A1^ENSG00000113712.19 chr5:149525171:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2262:6797:9348 . YES_LDAS 0.1007 GT 1.3996 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr5]"]

OTUD5--FGFR4 1 0 1.00 0.00 ONLY_REF_SPLICE OTUD5^ENSG00000068308.14 chrX:48925847:- FGFR4^ENSG00000160867.15 chr5:177088239:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2207:11910:3820 . NO_LDAS 0.1007 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chrX--chr5]"]

OGT--SNX8 1 0 1.00 0.00 ONLY_REF_SPLICE OGT^ENSG00000147162.14 chrX:71537110:+ SNX8^ENSG00000106266.11 chr7:2278305:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2166:14925:22758 . NO_LDAS 0.1007 GC 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chrX--chr7]"]

OAS2--OAS1 1 0 1.00 0.00 ONLY_REF_SPLICE OAS2^ENSG00000111335.14 chr12:112978785:+ OAS1^ENSG00000089127.15 chr12:112916509:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1297:43014:1897 . YES_LDAS 0.1007 GT 1.8892 AG 1.8062 ["INTRACHROMOSOMAL[chr12:0.05Mb]"

LOCAL_REARRANGEMENT:+:[45176]]

OAS2--FUS 1 0 1.00 0.00 INCL_NON_REF_SPLICE OAS2^ENSG00000111335.14 chr12:113005037:+ FUS^ENSG00000089280.19 chr16:31190367:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2144:16663:9043 . YES_LDAS 0.1007 GC 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr16]"]

NUP93--WDR37 1 0 1.00 0.00 ONLY_REF_SPLICE NUP93^ENSG00000102900.13 chr16:56805632:+ WDR37^ENSG00000047056.16 chr10:1084403:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1147:51179:14859 . YES_LDAS 0.1007 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr10]"]

NUP93--RN7SKP9 1 0 0.17 0.00 INCL_NON_REF_SPLICE NUP93^ENSG00000102900.13 chr16:56805632:+ RN7SKP9^ENSG00000201793.1 chr13:99205906:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174 . YES_LDAS 0.0171 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr13]"]

NUP93--RN7SKP80 1 0 0.17 0.00 INCL_NON_REF_SPLICE NUP93^ENSG00000102900.13 chr16:56805632:+ RN7SKP80^ENSG00000202058.1 chr22:42565133:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174 . YES_LDAS 0.0171 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr22]"]

NUP93--RN7SKP180 1 0 0.17 0.00 INCL_NON_REF_SPLICE NUP93^ENSG00000102900.13 chr16:56805632:+ RN7SKP180^ENSG00000200783.1 chr17:72663954:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174 . YES_LDAS 0.0171 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr17]"]

NUP93--RN7SKP173 1 0 0.17 0.00 INCL_NON_REF_SPLICE NUP93^ENSG00000102900.13 chr16:56805632:+ RN7SKP173^ENSG00000199691.1 chr20:38761724:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174 . YES_LDAS 0.0171 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr20]"]

NUP93--RN7SKP133 1 0 0.17 0.00 INCL_NON_REF_SPLICE NUP93^ENSG00000102900.13 chr16:56805632:+ RN7SKP133^ENSG00000201715.1 chr5:17345814:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174 . YES_LDAS 0.0171 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr5]"]

NUP93--7SK 1 0 0.17 0.00 INCL_NON_REF_SPLICE NUP93^ENSG00000102900.13 chr16:56805632:+ 7SK^ENSG00000271394.1 chr17:35889672:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2249:5660:28174 . YES_LDAS 0.0171 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr3]"]

NUP210--PITPNA 1 0 1.00 0.00 ONLY_REF_SPLICE NUP210^ENSG00000132182.12 chr3:13351879:- PITPNA^ENSG00000174238.15 chr17:1538952:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2277:44697:13017 . NO_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr17]"]

NUP210--NCKAP1L 1 0 1.00 0.00 ONLY_REF_SPLICE NUP210^ENSG00000132182.12 chr3:13351879:- NCKAP1L^ENSG00000123338.13 chr12:54511803:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1267:1989:29247 . YES_LDAS 0.1007 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr12]"]

NUP188--TGM1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUP188^ENSG00000095319.14 chr9:129005776:+ TGM1^ENSG00000092295.12 chr14:24264404:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1140:27305:19506 . NO_LDAS 0.1007 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr14]"]

NUMA1--FTO 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUMA1^ENSG00000137497.18 chr11:72014696:- FTO^ENSG00000140718.21 chr16:54115688:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2118:42154:21749 . NO_LDAS 0.1007 GT 1.8062 AG 1.4566 ["INTERCHROMOSOMAL[chr11--chr16]"]

NTAN1--HNRNPC 1 0 0.50 0.00 ONLY_REF_SPLICE NTAN1^ENSG00000157045.9 chr16:15055891:- HNRNPC^ENSG00000092199.18 chr14:21213117:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2235:22765:10581 . YES_LDAS 0.0504 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr14]"]

NPEPPS--NEK9 1 0 0.50 0.00 ONLY_REF_SPLICE NPEPPS^ENSG00000141279.17 chr17:47531555:+ NEK9^ENSG00000119638.14 chr14:75124223:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2276:47027:28238 . YES_LDAS 0.0504 GT 1.4295 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr14]"]

NOP53--DHX34 1 0 1.00 0.00 ONLY_REF_SPLICE NOP53^ENSG00000105373.19 chr19:47745783:+ DHX34^ENSG00000134815.19 chr19:47381980:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2288:32723:7681 . YES_LDAS 0.1007 GT 1.4566 AG 1.7232 ["INTRACHROMOSOMAL[chr19:0.36Mb]"]

NLRC5--PSME3IP1 1 0 1.00 0.00 ONLY_REF_SPLICE NLRC5^ENSG00000140853.16 chr16:57067828:+ PSME3IP1^ENSG00000172775.17 chr16:57173869:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1284:19612:16558 . YES_LDAS 0.1007 GT 1.9899 AG 1.5546 ["INTRACHROMOSOMAL[chr16:0.07Mb]"

LOCAL_INVERSION:+:-:[68935]]

NEAT1--ZBTB4 1 0 1.00 0.00 INCL_NON_REF_SPLICE NEAT1^ENSG00000245532.9 chr11:65430674:+ ZBTB4^ENSG00000174282.12 chr17:7463515:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2156:14222:6095 . YES_LDAS 0.1007 GT 1.9656 AG 1.1033 ["INTERCHROMOSOMAL[chr11--chr17]"]

NDUFS4--ARL15 1 0 1.00 0.00 INCL_NON_REF_SPLICE NDUFS4^ENSG00000164258.12 chr5:53683221:+ ARL15^ENSG00000185305.11 chr5:54171928:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1170:22146:3932 . YES_LDAS 0.1007 GT 1.8295 AG 1.8295 ["INTRACHROMOSOMAL[chr5:0.20Mb]"]

NDUFAF6--AC113385.3 1 0 0.07 0.00 ONLY_REF_SPLICE NDUFAF6^ENSG00000156170.13 chr8:95025205:+ AC113385.3^ENSG00000275374.1 chr5:100375784:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:2212:14065:10149 . YES_LDAS 0.0071 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr5]"]

NCOA7--NRDC 1 0 1.00 0.00 ONLY_REF_SPLICE NCOA7^ENSG00000111912.20 chr6:125855240:+ NRDC^ENSG00000078618.22 chr1:51834170:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1166:27305:6015 . YES_LDAS 0.1007 GT 1.5058 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"]

NAP1L1--AHR 1 0 1.00 0.00 ONLY_REF_SPLICE NAP1L1^ENSG00000187109.15 chr12:76084567:- AHR^ENSG00000106546.14 chr7:17309936:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1188:25891:16830 . YES_LDAS 0.1007 GT 1.9219 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr7]"]

MYO5C--MYO5A 1 0 1.00 0.00 ONLY_REF_SPLICE MYO5C^ENSG00000128833.13 chr15:52269753:- MYO5A^ENSG00000197535.15 chr15:52340394:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1207:34480:15436 . YES_LDAS 0.1007 GT 1.7819 AG 1.9219 ["DGD_PARALOGS"

HGNC_GENEFAM

INTRACHROMOSOMAL[chr15:0.01Mb]

LOCAL_REARRANGEMENT:-:[11479]]

MYO1C--SLC25A39 1 0 1.00 0.00 ONLY_REF_SPLICE MYO1C^ENSG00000197879.17 chr17:1467242:- SLC25A39^ENSG00000013306.16 chr17:44321767:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2169:40462:29231 . NO_LDAS 0.1007 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr17:42.83Mb]"]

MYCBP2-AS1--SLC7A6 1 0 1.00 0.00 ONLY_REF_SPLICE MYCBP2-AS1^ENSG00000236051.7 chr13:77092567:+ SLC7A6^ENSG00000103064.15 chr16:68294705:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2155:42330:6896 . YES_LDAS 0.1007 GT 1.9329 AG 1.4295 ["GTEx_recurrent_StarF2019"

INTERCHROMOSOMAL[chr13--chr16]]

MTRF1--SLF1 1 0 1.00 0.00 ONLY_REF_SPLICE MTRF1^ENSG00000120662.16 chr13:41233890:- SLF1^ENSG00000133302.13 chr5:94628811:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1169:7990:7441 . YES_LDAS 0.1007 GT 1.6402 AG 1.9086 ["INTERCHROMOSOMAL[chr13--chr5]"]

MSANTD2--SNX25 1 0 1.00 0.00 ONLY_REF_SPLICE MSANTD2^ENSG00000120458.13 chr11:124799871:- SNX25^ENSG00000109762.16 chr4:185264438:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1159:34443:7072 . NO_LDAS 0.1007 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr4]"]

MRTFA--CSNK2A2 1 0 1.00 0.00 ONLY_REF_SPLICE MRTFA^ENSG00000196588.20 chr22:40463221:- CSNK2A2^ENSG00000070770.10 chr16:58186856:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1214:15969:3227 . YES_LDAS 0.1007 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr22--chr16]"]

MR1--PIEZO2 1 0 1.00 0.00 ONLY_REF_SPLICE MR1^ENSG00000153029.15 chr1:181034074:+ PIEZO2^ENSG00000154864.13 chr18:10979660:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2185:29284:10021 . YES_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr18]"]

MKRN1--NCOR2 1 0 1.00 0.00 ONLY_REF_SPLICE MKRN1^ENSG00000133606.11 chr7:140479160:- NCOR2^ENSG00000196498.13 chr12:124457162:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2156:46149:13385 . YES_LDAS 0.1007 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr12]"]

MICA--TENT5C 1 0 1.00 0.00 ONLY_REF_SPLICE MICA^ENSG00000204520.14 chr6:31400763:+ TENT5C^ENSG00000183508.5 chr1:117622842:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2283:29275:21348 . YES_LDAS 0.1007 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr1]"]

MIB1--VAPA 1 0 1.00 0.00 ONLY_REF_SPLICE MIB1^ENSG00000101752.12 chr18:21741812:+ VAPA^ENSG00000101558.14 chr18:9931810:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2162:5447:11142 . YES_LDAS 0.1007 GT 1.4566 AG 1.9219 ["INTRACHROMOSOMAL[chr18:11.74Mb]"]

MED26--AC241585.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE MED26^ENSG00000105085.11 chr19:16627872:- AC241585.1^ENSG00000223612.3 chr1:145233055:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1150:11152:12536 . YES_LDAS 0.0504 GT 1.5058 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr1]"]

MED15--ATXN3 1 0 0.33 0.00 INCL_NON_REF_SPLICE MED15^ENSG00000099917.17 chr22:20566562:+ ATXN3^ENSG00000066427.24 chr14:92071040:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1148:25817:6127 . YES_LDAS 0.0332 GC 1.5850 AG 1.5656 ["INTERCHROMOSOMAL[chr22--chr14]"]

MED13L--WASHC3 1 0 1.00 0.00 ONLY_REF_SPLICE MED13L^ENSG00000123066.9 chr12:116237468:- WASHC3^ENSG00000120860.11 chr12:102046119:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2172:34702:4477 . YES_LDAS 0.1007 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr12:13.90Mb]"]

MBP--ZNF516 1 0 1.00 0.00 ONLY_REF_SPLICE MBP^ENSG00000197971.16 chr18:77132580:- ZNF516^ENSG00000101493.11 chr18:76380303:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1284:4782:15789 . YES_LDAS 0.1007 GT 1.5219 AG 1.4295 ["ChimerSeq"

INTRACHROMOSOMAL[chr18:0.48Mb]]

MBOAT7--AC012313.8 1 0 1.00 0.00 INCL_NON_REF_SPLICE MBOAT7^ENSG00000125505.17 chr19:54183647:- AC012313.8^ENSG00000269473.1 chr19:58443483:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2174:32317:6047 . NO_LDAS 0.1007 AT 1.9329 AC 1.4256 ["INTRACHROMOSOMAL[chr19:4.25Mb]"]

MAVS--RPS9 1 0 1.00 0.00 ONLY_REF_SPLICE MAVS^ENSG00000088888.18 chr20:3846903:+ RPS9^ENSG00000170889.14 chr19:54201160:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1107:38188:26059 . YES_LDAS 0.1007 GT 1.6895 AG 1.4566 ["INTERCHROMOSOMAL[chr20--chr19]"]

MAP3K13--TP63 1 0 1.00 0.00 ONLY_REF_SPLICE MAP3K13^ENSG00000073803.14 chr3:185285643:+ TP63^ENSG00000073282.14 chr3:189737740:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2255:9331:18128 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr3:4.14Mb]"]

MAD1L1--SNX8 1 0 1.00 0.00 ONLY_REF_SPLICE MAD1L1^ENSG00000002822.16 chr7:1898200:- SNX8^ENSG00000106266.11 chr7:2278305:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1230:37457:22197 . YES_LDAS 0.1007 GT 1.9086 AG 1.7232 ["TCGA_StarF2019"

CCLE_StarF2019

INTRACHROMOSOMAL[chr7:0.02Mb]

LOCAL_REARRANGEMENT:-:[18527]]

LZTFL1--NCL 1 0 1.00 0.00 INCL_NON_REF_SPLICE LZTFL1^ENSG00000163818.18 chr3:45832971:- NCL^ENSG00000115053.17 chr2:231460293:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1268:33546:13497 . NO_LDAS 0.1007 GT 1.5329 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr2]"]

LTN1--C9orf129 1 0 0.50 0.00 INCL_NON_REF_SPLICE LTN1^ENSG00000198862.14 chr21:28960529:- C9orf129^ENSG00000204352.4 chr9:93335477:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2231:51900:23896 . YES_LDAS 0.0504 AT 1.9329 AC 1.4295 ["INTERCHROMOSOMAL[chr21--chr9]"]

LRBA--ANKRD17 1 0 1.00 0.00 ONLY_REF_SPLICE LRBA^ENSG00000198589.14 chr4:150588048:- ANKRD17^ENSG00000132466.19 chr4:73102547:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2257:9793:11815 . YES_LDAS 0.1007 GT 1.6895 AG 1.5058 ["INTRACHROMOSOMAL[chr4:77.01Mb]"]

LINC01055--SMC4 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01055^ENSG00000235366.2 chr13:45701027:- SMC4^ENSG00000113810.16 chr3:160411920:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1192:13260:26379 . YES_LDAS 0.1007 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr13--chr3]"]

LINC00957--PRKAR1B-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00957^ENSG00000235314.1 chr7:44041068:+ PRKAR1B-AS1^ENSG00000237181.1 chr7:607865:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2169:7759:6432 . YES_LDAS 0.1007 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr7:43.43Mb]"]

LIN37--CHD8 1 0 1.00 0.00 INCL_NON_REF_SPLICE LIN37^ENSG00000267796.8 chr19:35753253:+ CHD8^ENSG00000100888.15 chr14:21393491:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1233:2988:20723 . NO_LDAS 0.1007 GT 1.7968 AG 1.5329 ["INTERCHROMOSOMAL[chr19--chr14]"]

LAT2--EIF4H 1 0 1.00 0.00 ONLY_REF_SPLICE LAT2^ENSG00000086730.17 chr7:74199685:+ EIF4H^ENSG00000106682.16 chr7:74194741:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1103:1971:2298 . YES_LDAS 0.1007 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr7:0.00Mb]"

LOCAL_REARRANGEMENT:+:[2530]]

KLHL2--LRBA 1 0 1.00 0.00 ONLY_REF_SPLICE KLHL2^ENSG00000109466.14 chr4:165207902:+ LRBA^ENSG00000198589.14 chr4:150735366:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1218:18420:29007 . YES_LDAS 0.1007 GT 1.3383 AG 1.9899 ["INTRACHROMOSOMAL[chr4:14.19Mb]"]

KIF13B--DNA2 1 0 1.00 0.00 ONLY_REF_SPLICE KIF13B^ENSG00000197892.13 chr8:29262980:- DNA2^ENSG00000138346.15 chr10:68470163:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1252:14777:25578 . YES_LDAS 0.1007 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr10]"]

KIF11--SUPT20H 1 0 1.00 0.00 ONLY_REF_SPLICE KIF11^ENSG00000138160.7 chr10:92616832:+ SUPT20H^ENSG00000102710.20 chr13:37024442:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2183:10357:24489 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr13]"]

KIF11--IDE 1 0 1.00 0.00 ONLY_REF_SPLICE KIF11^ENSG00000138160.7 chr10:92621473:+ IDE^ENSG00000119912.18 chr10:92537550:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1107:13177:29247 . YES_LDAS 0.1007 GT 1.5058 AG 1.6729 ["INTRACHROMOSOMAL[chr10:0.00Mb]"

LOCAL_INVERSION:+:-:[9]]

KDM6B--RPL29 1 0 1.00 0.00 INCL_NON_REF_SPLICE KDM6B^ENSG00000132510.11 chr17:7849312:+ RPL29^ENSG00000162244.12 chr3:51993856:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1273:42275:19458 . NO_LDAS 0.1007 GT 1.5656 AG 1.5656 ["INTERCHROMOSOMAL[chr17--chr3]"]

KCTD13--GLYR1 1 0 1.00 0.00 ONLY_REF_SPLICE KCTD13^ENSG00000174943.11 chr16:29925790:- GLYR1^ENSG00000140632.17 chr16:4832912:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1201:47360:25642 . YES_LDAS 0.1007 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr16:25.06Mb]"]

KCND2--RPL41 1 0 1.00 0.00 ONLY_REF_SPLICE KCND2^ENSG00000184408.10 chr7:120275747:+ RPL41^ENSG00000229117.9 chr12:56116775:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2122:7713:3307 . YES_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr12]"]

KCNAB2--RPL22 1 0 1.00 0.00 ONLY_REF_SPLICE KCNAB2^ENSG00000069424.15 chr1:6040645:+ RPL22^ENSG00000116251.11 chr1:6197756:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2275:27009:6111 . YES_LDAS 0.1007 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr1:0.08Mb]"

LOCAL_INVERSION:+:-:[83827]]

JUND--CCDC13 1 0 1.00 0.00 INCL_NON_REF_SPLICE JUND^ENSG00000130522.6 chr19:18280504:- CCDC13^ENSG00000244607.7 chr3:42739711:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2191:19696:19009 . NO_LDAS 0.1007 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr3]"]

ITPKB--PDE8A 1 0 1.00 0.00 ONLY_REF_SPLICE ITPKB^ENSG00000143772.9 chr1:226735527:- PDE8A^ENSG00000073417.15 chr15:85097948:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1265:28230:27196 . YES_LDAS 0.1007 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr15]"]

ITPKB--FNBP1 1 0 1.00 0.00 ONLY_REF_SPLICE ITPKB^ENSG00000143772.9 chr1:226735527:- FNBP1^ENSG00000187239.17 chr9:129994958:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1238:29099:13001 . YES_LDAS 0.1007 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr9]"]

ITGA4--PSMD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ITGA4^ENSG00000115232.14 chr2:181522308:+ PSMD3^ENSG00000108344.15 chr17:39988716:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2223:38086:14507 . YES_LDAS 0.1007 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr17]"]

ITGA4--FUS 1 0 1.00 0.00 ONLY_REF_SPLICE ITGA4^ENSG00000115232.14 chr2:181485992:+ FUS^ENSG00000089280.19 chr16:31189123:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1168:12576:27020 . NO_LDAS 0.1007 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr16]"]

IRAG2--THAP12P6 1 0 1.00 0.00 INCL_NON_REF_SPLICE IRAG2^ENSG00000118308.15 chr12:25033947:+ THAP12P6^ENSG00000227882.1 chr13:26234834:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2136:9266:22374 . NO_LDAS 0.1007 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chr13]"]

IQGAP3--GBA 1 0 0.50 0.00 ONLY_REF_SPLICE IQGAP3^ENSG00000183856.11 chr1:156569376:- GBA^ENSG00000177628.16 chr1:155237578:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2118:35164:4188 . YES_LDAS 0.0504 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr1:1.28Mb]"]

INTS13--RABEP1 1 0 1.00 0.00 ONLY_REF_SPLICE INTS13^ENSG00000064102.15 chr12:26922616:- RABEP1^ENSG00000029725.17 chr17:5308694:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1119:17449:8098 . YES_LDAS 0.1007 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr17]"]

INTS10--TRIM22 1 0 1.00 0.00 ONLY_REF_SPLICE INTS10^ENSG00000104613.12 chr8:19845797:+ TRIM22^ENSG00000132274.16 chr11:5698315:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2188:16367:4557 . YES_LDAS 0.1007 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr11]"]

INSR--RPL28 1 0 1.00 0.00 INCL_NON_REF_SPLICE INSR^ENSG00000171105.14 chr19:7115214:- RPL28^ENSG00000108107.15 chr19:55388263:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1198:38206:12280 . YES_LDAS 0.1007 GT 1.9219 AG 1.7968 ["INTRACHROMOSOMAL[chr19:48.09Mb]"]

IL3RA--APOBEC3D 1 0 0.50 0.00 INCL_NON_REF_SPLICE IL3RA^ENSG00000185291.12 chrX:1341829:+ APOBEC3D^ENSG00000243811.12 chr22:39032800:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1149:18383:21797 . YES_LDAS 0.0504 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chrY--chr22]"]

IL17RB--GTF2I 1 0 1.00 0.00 ONLY_REF_SPLICE IL17RB^ENSG00000056736.10 chr3:53849795:+ GTF2I^ENSG00000263001.7 chr7:74698961:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2148:48987:18048 . YES_LDAS 0.1007 GT 1.9656 AG 1.5219 ["INTERCHROMOSOMAL[chr3--chr7]"]

IGL-@-ext--RPL3 1 0 1.00 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22882946:- RPL3^ENSG00000100316.16 chr22:39314825:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1282:4060:6944 . YES_LDAS 0.1007 AG 0.9183 CA 1.7465 ["INTRACHROMOSOMAL[chr22:16.39Mb]"]

IGL-@-ext--MTATP6P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22906529:- MTATP6P1^ENSG00000248527.1 chr1:634123:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1148:2766:28510 . YES_LDAS 0.1007 TT 1.8256 TA 1.8062 ["INTERCHROMOSOMAL[chr22--chr1]"]

IGL-@-ext--HNRNPA3 1 0 0.33 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22922757:- HNRNPA3^ENSG00000170144.21 chr2:177219037:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2113:48451:22694 . YES_LDAS 0.0332 GT 1.2729 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr2]"]

IGL-@-ext--HNRNPA3 1 0 0.33 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22906505:- HNRNPA3^ENSG00000170144.21 chr2:177219037:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2113:48451:22694 . YES_LDAS 0.0332 GT 1.2310 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr2]"]

IGL-@-ext--HNRNPA3 1 0 0.33 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22901139:- HNRNPA3^ENSG00000170144.21 chr2:177219037:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2113:48451:22694 . YES_LDAS 0.0332 GT 1.2310 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr2]"]

IGH-@-ext--SEC24B 1 0 0.05 0.00 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106636760:+ SEC24B^ENSG00000138802.11 chr4:109433894:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1174:4273:5518 . YES_LDAS 0.005 AA 1.7465 CT 1.3383 ["INTERCHROMOSOMAL[chr14--chr4]"]

IGH-@-ext--RIPOR1 1 0 0.50 0.00 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:105771201:+ RIPOR1^ENSG00000039523.20 chr16:67544181:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1145:2590:25610 . YES_LDAS 0.0504 CC 1.8295 GT 1.8256 ["INTERCHROMOSOMAL[chr14--chr16]"]

IGH-@-ext--RIPOR1 1 0 0.50 0.00 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:105742866:+ RIPOR1^ENSG00000039523.20 chr16:67544181:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1145:2590:25610 . YES_LDAS 0.0504 CC 1.8295 GT 1.8256 ["INTERCHROMOSOMAL[chr14--chr16]"]

IGH-@-ext--CMIP 1 0 0.05 0.00 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106636760:+ CMIP^ENSG00000153815.17 chr16:81445374:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2168:16201:19169 . YES_LDAS 0.005 AA 1.7465 TT 1.9329 ["INTERCHROMOSOMAL[chr14--chr16]"]

IGF2BP3--FAM114A2 1 0 1.00 0.00 ONLY_REF_SPLICE IGF2BP3^ENSG00000136231.14 chr7:23342064:- FAM114A2^ENSG00000055147.19 chr5:154002969:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2218:41239:7281 . YES_LDAS 0.1007 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr5]"]

IFI6--CNPPD1 1 0 1.00 0.00 ONLY_REF_SPLICE IFI6^ENSG00000126709.16 chr1:27669245:- CNPPD1^ENSG00000115649.16 chr2:219176847:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1170:3219:9396 . YES_LDAS 0.1007 GT 1.4256 AG 1.4716 ["INTERCHROMOSOMAL[chr1--chr2]"]

IFI44L--CAND1 1 0 1.00 0.00 ONLY_REF_SPLICE IFI44L^ENSG00000137959.17 chr1:78620571:+ CAND1^ENSG00000111530.13 chr12:67307397:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2239:25197:18833 . YES_LDAS 0.1007 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr12]"]

HYOU1--COL9A2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HYOU1^ENSG00000149428.19 chr11:119052295:- COL9A2^ENSG00000049089.15 chr1:40309985:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1153:51253:17935 . YES_LDAS 0.1007 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr1]"]

HSP90AA1--UBXN4 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSP90AA1^ENSG00000080824.19 chr14:102084910:- UBXN4^ENSG00000144224.17 chr2:135769813:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2197:36228:24008 . NO_LDAS 0.1007 GT 0.8366 AG 1.5329 ["INTERCHROMOSOMAL[chr14--chr2]"]

HNRNPU--ZBTB18 1 0 1.00 0.00 ONLY_REF_SPLICE HNRNPU^ENSG00000153187.20 chr1:244863617:- ZBTB18^ENSG00000179456.10 chr1:244053788:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2282:11023:6095 . YES_LDAS 0.1007 GT 1.2310 AG 1.8062 ["INTRACHROMOSOMAL[chr1:0.78Mb]"]

HNRNPA2B1--NCF1 1 0 0.33 0.00 INCL_NON_REF_SPLICE HNRNPA2B1^ENSG00000122566.22 chr7:26192013:- NCF1^ENSG00000158517.15 chr7:74774021:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2220:16228:20018 . YES_LDAS 0.0332 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr7:48.57Mb]"]

HNRNPA1--SEPHS1 1 0 1.00 0.00 ONLY_REF_SPLICE HNRNPA1^ENSG00000135486.19 chr12:54280822:+ SEPHS1^ENSG00000086475.15 chr10:13345028:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2238:6640:2025 . YES_LDAS 0.1007 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr10]"]

HLA-S--HLA-A 1 0 1.00 0.00 ONLY_REF_SPLICE HLA-S^ENSG00000225851.1 chr6:31382241:- HLA-A^ENSG00000206503.13 chr6:29945451:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2188:22451:22598 . YES_LDAS 0.1007 GT 1.9656 AG 1.9656 ["GTEx_recurrent_StarF2019"

HGNC_GENEFAM

INTRACHROMOSOMAL[chr6:1.44Mb]]

HLA-C--MUC16 1 0 1.00 0.00 INCL_NON_REF_SPLICE HLA-C^ENSG00000204525.17 chr6:31269489:- MUC16^ENSG00000181143.15 chr19:8848985:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2269:20528:4877 . NO_LDAS 0.1007 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019"

INTERCHROMOSOMAL[chr6--chr19]]

HLA-A--WARS1 1 0 0.14 0.00 INCL_NON_REF_SPLICE HLA-A^ENSG00000206503.13 chr6:29944232:+ WARS1^ENSG00000140105.18 chr14:100342497:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2113:49699:8803 . YES_LDAS 0.0141 AT 1.7968 AC 1.5329 ["INTERCHROMOSOMAL[chr6--chr14]"]

HIPK1-AS1--HECTD4 1 0 1.00 0.00 ONLY_REF_SPLICE HIPK1-AS1^ENSG00000235527.7 chr1:113928244:- HECTD4^ENSG00000173064.13 chr12:112219489:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2191:6927:12264 . YES_LDAS 0.1007 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr12]"]

HINT1--DDX18 1 0 1.00 0.00 ONLY_REF_SPLICE HINT1^ENSG00000169567.13 chr5:131162362:- DDX18^ENSG00000088205.13 chr2:117830582:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1179:51761:5006 . YES_LDAS 0.1007 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr2]"]

HERC4--PTEN 1 0 1.00 0.00 ONLY_REF_SPLICE HERC4^ENSG00000148634.16 chr10:68072883:- PTEN^ENSG00000171862.11 chr10:87925513:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2253:40915:1881 . NO_LDAS 0.1007 GT 1.4566 AG 1.7465 ["INTRACHROMOSOMAL[chr10:19.79Mb]"]

HDLBP--SEPTIN2 1 0 1.00 0.00 ONLY_REF_SPLICE HDLBP^ENSG00000115677.17 chr2:241233820:- SEPTIN2^ENSG00000168385.18 chr2:241350073:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2247:12031:16109 . YES_LDAS 0.1007 GT 1.7819 AG 1.8295 ["INTRACHROMOSOMAL[chr2:0.00Mb]"

NEIGHBORS_OVERLAP:-:+:[1961]]

HDLBP--MTERF4 1 0 1.00 0.00 ONLY_REF_SPLICE HDLBP^ENSG00000115677.17 chr2:241315570:- MTERF4^ENSG00000122085.17 chr2:241097427:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2246:20898:16285 . YES_LDAS 0.1007 GT 1.6895 AG 1.4295 ["INTRACHROMOSOMAL[chr2:0.12Mb]"]

HDAC9--FANCL 1 0 1.00 0.00 ONLY_REF_SPLICE HDAC9^ENSG00000048052.23 chr7:18585522:+ FANCL^ENSG00000115392.12 chr2:58204226:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1252:40148:1769 . YES_LDAS 0.1007 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr2]"]

HAR1A--HLA-B 1 0 1.00 0.00 INCL_NON_REF_SPLICE HAR1A^ENSG00000225978.3 chr20:63102300:+ HLA-B^ENSG00000234745.13 chr6:31355592:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2112:12419:15276 . NO_LDAS 0.1007 GT 1.6895 AG 1.2729 ["INTERCHROMOSOMAL[chr20--chr6]"]

H2AZ1--H2AZ2 1 0 0.50 0.00 ONLY_REF_SPLICE H2AZ1^ENSG00000164032.12 chr4:99949273:- H2AZ2^ENSG00000105968.19 chr7:44835658:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1293:2914:20435 . NO_LDAS 0.0504 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr7]"]

GTF3C2--EIF2B4 1 0 1.00 0.00 ONLY_REF_SPLICE GTF3C2^ENSG00000115207.13 chr2:27356087:- EIF2B4^ENSG00000115211.16 chr2:27364898:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2209:45760:3644 . YES_LDAS 0.1007 GT 1.4566 AG 1.9656 ["INTRACHROMOSOMAL[chr2:0.01Mb]"

LOCAL_REARRANGEMENT:-:[7318]]

GRK3--DENND1A 1 0 1.00 0.00 ONLY_REF_SPLICE GRK3^ENSG00000100077.15 chr22:25565153:+ DENND1A^ENSG00000119522.16 chr9:123440491:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1221:28803:12296 . YES_LDAS 0.1007 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr9]"]

GPS2--AC133561.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE GPS2^ENSG00000132522.16 chr17:7314291:- AC133561.1^ENSG00000198555.7 chr16:33982613:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2115:32862:5294 . NO_LDAS 0.0332 GT 1.4295 AG 1.7968 ["INTERCHROMOSOMAL[chr17--chr16]"]

GPKOW--NIPBL 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPKOW^ENSG00000068394.11 chrX:49115891:- NIPBL^ENSG00000164190.19 chr5:36975922:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1139:37226:20259 . NO_LDAS 0.1007 GT 1.7465 AG 1.7056 ["INTERCHROMOSOMAL[chrX--chr5]"]

GOLGA1--PPP6C 1 0 1.00 0.00 ONLY_REF_SPLICE GOLGA1^ENSG00000136935.14 chr9:124938577:- PPP6C^ENSG00000119414.12 chr9:125160906:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2161:49089:17647 . YES_LDAS 0.1007 GT 1.9329 AG 1.6049 ["INTRACHROMOSOMAL[chr9:0.20Mb]"]

GNL3--DCAF1 1 0 1.00 0.00 ONLY_REF_SPLICE GNL3^ENSG00000163938.17 chr3:52688192:+ DCAF1^ENSG00000145041.15 chr3:51433264:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1166:45150:12488 . YES_LDAS 0.1007 GT 1.6049 AG 1.7465 ["INTRACHROMOSOMAL[chr3:1.18Mb]"]

GNG10--UGCG 1 0 1.00 0.00 ONLY_REF_SPLICE GNG10^ENSG00000242616.4 chr9:111666946:+ UGCG^ENSG00000148154.10 chr9:111914605:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1165:32354:26171 . YES_LDAS 0.1007 GT 1.9329 AG 1.7819 ["GTEx_recurrent_StarF2019"

INTRACHROMOSOMAL[chr9:0.23Mb]]

GLUD1P3--REV1 1 0 1.00 0.00 ONLY_REF_SPLICE GLUD1P3^ENSG00000250959.2 chr10:73730873:+ REV1^ENSG00000135945.10 chr2:99421653:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2112:46907:5823 . YES_LDAS 0.1007 GT 1.2729 AG 1.5656 ["INTERCHROMOSOMAL[chr10--chr2]"]

GLE1--DYNC2I2 1 0 1.00 0.00 ONLY_REF_SPLICE GLE1^ENSG00000119392.15 chr9:128515639:+ DYNC2I2^ENSG00000119333.12 chr9:128640939:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2297:25715:20916 . YES_LDAS 0.1007 GT 1.4716 AG 1.8892 ["INTRACHROMOSOMAL[chr9:0.09Mb]"

LOCAL_INVERSION:+:-:[91365]]

GEN1--HELLS 1 0 1.00 0.00 ONLY_REF_SPLICE GEN1^ENSG00000178295.15 chr2:17753967:+ HELLS^ENSG00000119969.15 chr10:94574554:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1127:16718:22598 . YES_LDAS 0.1007 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr10]"]

GBF1--NDUFB4 1 0 1.00 0.00 ONLY_REF_SPLICE GBF1^ENSG00000107862.6 chr10:102370860:+ NDUFB4^ENSG00000065518.8 chr3:120601111:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2292:14518:9267 . YES_LDAS 0.1007 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr10--chr3]"]

GART--NUDCD3 1 0 1.00 0.00 ONLY_REF_SPLICE GART^ENSG00000159131.17 chr21:33532345:- NUDCD3^ENSG00000015676.18 chr7:44485284:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2283:22469:6896 . YES_LDAS 0.1007 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr21--chr7]"]

GARS1-DT--TAF4B 1 0 1.00 0.00 ONLY_REF_SPLICE GARS1-DT^ENSG00000196295.12 chr7:30550636:- TAF4B^ENSG00000141384.13 chr18:26357690:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2118:16700:12760 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr18]"]

GALNT18--VPS26B 1 0 1.00 0.00 ONLY_REF_SPLICE GALNT18^ENSG00000110328.6 chr11:11621359:- VPS26B^ENSG00000151502.11 chr11:134234897:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2143:45418:6063 . YES_LDAS 0.1007 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr11:122.60Mb]"]

FXR1--PIBF1 1 0 1.00 0.00 ONLY_REF_SPLICE FXR1^ENSG00000114416.18 chr3:180970358:+ PIBF1^ENSG00000083535.16 chr13:72998822:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2212:3487:14827 . YES_LDAS 0.1007 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr13]"]

FUBP3--ZBTB43 1 0 1.00 0.00 ONLY_REF_SPLICE FUBP3^ENSG00000107164.16 chr9:130579764:+ ZBTB43^ENSG00000169155.10 chr9:126832487:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2184:51743:9972 . YES_LDAS 0.1007 GT 1.7056 AG 1.8892 ["INTRACHROMOSOMAL[chr9:3.74Mb]"]

FTSJ3--ANO6 1 0 1.00 0.00 INCL_NON_REF_SPLICE FTSJ3^ENSG00000108592.17 chr17:63821379:- ANO6^ENSG00000177119.17 chr12:45388229:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2157:17412:25242 . NO_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr17--chr12]"]

FTH1--DHX57 1 0 1.00 0.00 ONLY_REF_SPLICE FTH1^ENSG00000167996.16 chr11:61967312:- DHX57^ENSG00000163214.21 chr2:38806693:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2275:14111:8306 . YES_LDAS 0.1007 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr2]"]

FRMPD3--EIF2B3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FRMPD3^ENSG00000147234.10 chrX:107604311:+ EIF2B3^ENSG00000070785.17 chr1:44941592:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1149:21767:3596 . NO_LDAS 0.1007 GT 1.1589 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr1]"]

FOXRED1--DNPEP 1 0 1.00 0.00 ONLY_REF_SPLICE FOXRED1^ENSG00000110074.11 chr11:126271657:+ DNPEP^ENSG00000123992.20 chr2:219384443:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1290:21748:22566 . YES_LDAS 0.1007 GT 1.5850 AG 1.5058 ["INTERCHROMOSOMAL[chr11--chr2]"]

FNBP1--SURF4 1 0 1.00 0.00 ONLY_REF_SPLICE FNBP1^ENSG00000187239.17 chr9:129899965:- SURF4^ENSG00000148248.14 chr9:133367445:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2143:49838:15548 . YES_LDAS 0.1007 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr9:3.32Mb]"]

FNBP1--LNX2 1 0 1.00 0.00 ONLY_REF_SPLICE FNBP1^ENSG00000187239.17 chr9:129924960:- LNX2^ENSG00000139517.9 chr13:27606771:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2110:23921:10245 . YES_LDAS 0.1007 GT 1.2366 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr13]"]

FLYWCH1--SFI1 1 0 1.00 0.00 ONLY_REF_SPLICE FLYWCH1^ENSG00000059122.17 chr16:2940092:+ SFI1^ENSG00000198089.16 chr22:31580272:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2114:10163:25562 . NO_LDAS 0.1007 GT 1.9899 AG 1.5546 ["INTERCHROMOSOMAL[chr16--chr22]"]

FHOD3--SLC39A6 1 0 1.00 0.00 ONLY_REF_SPLICE FHOD3^ENSG00000134775.15 chr18:36576545:+ SLC39A6^ENSG00000141424.13 chr18:36116779:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2227:5327:21797 . YES_LDAS 0.1007 GT 1.9899 AG 1.7232 ["INTRACHROMOSOMAL[chr18:0.17Mb]"]

FGGY--HOOK1 1 0 1.00 0.00 ONLY_REF_SPLICE FGGY^ENSG00000172456.18 chr1:59321750:+ HOOK1^ENSG00000134709.12 chr1:59821858:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1277:40250:6047 . YES_LDAS 0.1007 GT 1.9329 AG 1.9329 ["TCGA_StarF2019"

INTRACHROMOSOMAL[chr1:0.00Mb]

NEIGHBORS[4139]]

FCHSD2--RAB12 1 0 1.00 0.00 ONLY_REF_SPLICE FCHSD2^ENSG00000137478.15 chr11:73083695:- RAB12^ENSG00000206418.4 chr18:8624938:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1141:3182:7729 . YES_LDAS 0.1007 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr18]"]

FBXW7--ACTN1 1 0 0.33 0.00 INCL_NON_REF_SPLICE FBXW7^ENSG00000109670.16 chr4:152411303:- ACTN1^ENSG00000072110.15 chr14:68887958:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1103:12585:25947 . YES_LDAS 0.0332 GT 0.7219 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr14]"]

FBXO25--SEPTIN14 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2228:11457:16141 . YES_LDAS 0.1007 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"]

FASTKD3--MARCHF6 1 0 1.00 0.00 ONLY_REF_SPLICE FASTKD3^ENSG00000124279.12 chr5:7868979:- MARCHF6^ENSG00000145495.16 chr5:10433594:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1236:31521:22294 . YES_LDAS 0.1007 GT 1.4295 AG 1.9086 ["INTRACHROMOSOMAL[chr5:2.48Mb]"]

FAM193A--PRICKLE3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM193A^ENSG00000125386.16 chr4:2646832:+ PRICKLE3^ENSG00000012211.13 chrX:49175286:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2267:22497:22101 . NO_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chrX]"]

FAM133B--ANKIB1 1 0 1.00 0.00 ONLY_REF_SPLICE FAM133B^ENSG00000234545.8 chr7:92590268:- ANKIB1^ENSG00000001629.10 chr7:92294889:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1264:2683:29391 . YES_LDAS 0.1007 GT 1.8295 AG 1.5656 ["INTRACHROMOSOMAL[chr7:0.16Mb]"]

FAM107B--CELF2 1 0 1.00 0.00 ONLY_REF_SPLICE FAM107B^ENSG00000065809.14 chr10:14604240:- CELF2^ENSG00000048740.18 chr10:11314139:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2229:50060:19586 . YES_LDAS 0.1007 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr10:3.18Mb]"]

FAF1--CMC2 1 0 1.00 0.00 ONLY_REF_SPLICE FAF1^ENSG00000185104.20 chr1:50959767:- CMC2^ENSG00000103121.9 chr16:80981877:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1216:29691:3836 . YES_LDAS 0.1007 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr16]"]

EXOSC7--ACTL7B 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOSC7^ENSG00000075914.13 chr3:45011393:+ ACTL7B^ENSG00000148156.8 chr9:108854803:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2282:28063:6816 . NO_LDAS 0.1007 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr9]"]

EXOC2--DOK3 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOC2^ENSG00000112685.14 chr6:629856:- DOK3^ENSG00000146094.16 chr5:177504002:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1181:15618:7201 . NO_LDAS 0.1007 GC 1.8295 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr5]"]

ERV3-1--CHASERR 1 0 1.00 0.00 ONLY_REF_SPLICE ERV3-1^ENSG00000213462.5 chr7:65006541:- CHASERR^ENSG00000272888.7 chr15:92885515:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1260:25253:9187 . YES_LDAS 0.1007 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr15]"]

ERO1A--OVOL2 1 0 1.00 0.00 ONLY_REF_SPLICE ERO1A^ENSG00000197930.13 chr14:52682325:- OVOL2^ENSG00000125850.11 chr20:17957037:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1245:31706:2298 . YES_LDAS 0.1007 GT 1.8062 AG 1.9219 ["INTERCHROMOSOMAL[chr14--chr20]"]

EPSTI1--HP1BP3 1 0 1.00 0.00 ONLY_REF_SPLICE EPSTI1^ENSG00000133106.15 chr13:42991978:- HP1BP3^ENSG00000127483.19 chr1:20773610:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2187:8637:18080 . YES_LDAS 0.1007 GT 1.3996 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr1]"]

EPM2AIP1--CDV3 1 0 1.00 0.00 ONLY_REF_SPLICE EPM2AIP1^ENSG00000178567.8 chr3:36992878:- CDV3^ENSG00000091527.16 chr3:133584002:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2205:28785:17968 . NO_LDAS 0.1007 GT 1.9329 AG 1.5329 ["INTRACHROMOSOMAL[chr3:96.58Mb]"]

EPG5--RIPOR2 1 0 0.50 0.00 INCL_NON_REF_SPLICE EPG5^ENSG00000152223.15 chr18:45934809:- RIPOR2^ENSG00000111913.20 chr6:24830523:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2120:37171:1160 . NO_LDAS 0.0504 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr6]"]

EPG5--OR2D3 1 0 0.50 0.00 INCL_NON_REF_SPLICE EPG5^ENSG00000152223.15 chr18:45934809:- OR2D3^ENSG00000178358.4 chr11:6921107:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2120:37171:1160 . NO_LDAS 0.0504 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr11]"]

ENTPD1-AS1--LRBA 1 0 1.00 0.00 ONLY_REF_SPLICE ENTPD1-AS1^ENSG00000226688.7 chr10:95904830:- LRBA^ENSG00000198589.14 chr4:150415590:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2290:19085:3820 . YES_LDAS 0.1007 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr10--chr4]"]

ENTPD1--PTP4A2 1 0 1.00 0.00 ONLY_REF_SPLICE ENTPD1^ENSG00000138185.20 chr10:95823364:+ PTP4A2^ENSG00000184007.22 chr1:31919658:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1160:16053:6800 . YES_LDAS 0.1007 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr10--chr1]"]

EMB--MTREX 1 0 1.00 0.00 ONLY_REF_SPLICE EMB^ENSG00000170571.12 chr5:50441040:- MTREX^ENSG00000039123.16 chr5:55366725:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1118:47314:1849 . YES_LDAS 0.1007 GT 1.7819 AG 1.8062 ["INTRACHROMOSOMAL[chr5:4.86Mb]"]

ELP6--PTPN23 1 0 1.00 0.00 ONLY_REF_SPLICE ELP6^ENSG00000163832.16 chr3:47513537:- PTPN23^ENSG00000076201.15 chr3:47396143:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1103:47462:27485 . YES_LDAS 0.1007 GT 1.4566 AG 1.8892 ["CCLE_StarF2019"

INTRACHROMOSOMAL[chr3:0.08Mb]

LOCAL_INVERSION:-:+:[82205]]

ELMOD3--SNRPA 1 0 1.00 0.00 INCL_NON_REF_SPLICE ELMOD3^ENSG00000115459.18 chr2:85355896:+ SNRPA^ENSG00000077312.9 chr19:40751424:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1195:50402:22486 . NO_LDAS 0.1007 GT 1.5850 AG 1.4716 ["HGNC_GENEFAM"

INTERCHROMOSOMAL[chr2--chr19]]

ELMO1--AOAH 1 0 1.00 0.00 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:36861659:- AOAH^ENSG00000136250.12 chr7:36686794:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2278:45714:16317 . YES_LDAS 0.1007 GT 1.9329 AG 1.2310 ["GTEx_recurrent_StarF2019"

INTRACHROMOSOMAL[chr7:0.13Mb]]

ELMO1--AOAH 1 0 1.00 0.00 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:36861659:- AOAH^ENSG00000136250.12 chr7:36674009:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2184:33777:21364 . YES_LDAS 0.1007 GT 1.9329 AG 1.8323 ["GTEx_recurrent_StarF2019"

INTRACHROMOSOMAL[chr7:0.13Mb]]

EIF5B--NRXN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF5B^ENSG00000158417.11 chr2:99337599:+ NRXN3^ENSG00000021645.20 chr14:79861935:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1230:41970:12200 . NO_LDAS 0.1007 GT 1.6895 AG 1.3383 ["INTERCHROMOSOMAL[chr2--chr14]"]

EIF4G2--TPT1-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE EIF4G2^ENSG00000110321.19 chr11:10805907:- TPT1-AS1^ENSG00000170919.16 chr13:45369959:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2259:51308:25498 . YES_LDAS 0.1007 GT 1.5628 AG 1.6729 ["INTERCHROMOSOMAL[chr11--chr13]"]

EIF3CL--GLYR1 1 0 1.00 0.00 ONLY_REF_SPLICE EIF3CL^ENSG00000205609.13 chr16:28399871:- GLYR1^ENSG00000140632.17 chr16:4832912:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1226:25373:20066 . YES_LDAS 0.1007 GT 1.5329 AG 1.9899 ["INTRACHROMOSOMAL[chr16:23.53Mb]"]

EHD1--CLPX 1 0 1.00 0.00 ONLY_REF_SPLICE EHD1^ENSG00000110047.18 chr11:64874421:- CLPX^ENSG00000166855.9 chr15:65166785:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2126:4495:12632 . YES_LDAS 0.1007 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr15]"]

EGR3--PWWP3A 1 0 1.00 0.00 INCL_NON_REF_SPLICE EGR3^ENSG00000179388.9 chr8:22693357:- PWWP3A^ENSG00000160953.17 chr19:1356324:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2153:35812:7841 . YES_LDAS 0.1007 GT 1.2419 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr19]"]

EDF1--GAPDH 1 0 0.10 0.00 INCL_NON_REF_SPLICE EDF1^ENSG00000107223.13 chr9:136866196:- GAPDH^ENSG00000111640.15 chr12:6537614:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2270:50347:4220 . NO_LDAS 0.0101 GC 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr12]"]

DTNBP1--XRN2 1 0 1.00 0.00 ONLY_REF_SPLICE DTNBP1^ENSG00000047579.20 chr6:15662814:- XRN2^ENSG00000088930.8 chr20:21386868:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1104:3681:4172 . YES_LDAS 0.1007 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr6--chr20]"]

DRAM1--MREG 1 0 1.00 0.00 ONLY_REF_SPLICE DRAM1^ENSG00000136048.14 chr12:101890221:+ MREG^ENSG00000118242.16 chr2:215996465:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2225:39963:22310 . NO_LDAS 0.1007 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr2]"]

DR1--FNBP1L 1 0 1.00 0.00 ONLY_REF_SPLICE DR1^ENSG00000117505.13 chr1:93354071:+ FNBP1L^ENSG00000137942.18 chr1:93499468:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1286:37846:2971 . YES_LDAS 0.1007 GT 1.6895 AG 1.9899 ["INTRACHROMOSOMAL[chr1:0.08Mb]"

NEIGHBORS[78625]]

DOCK8--DOCK6 1 0 1.00 0.00 ONLY_REF_SPLICE DOCK8^ENSG00000107099.16 chr9:379935:+ DOCK6^ENSG00000130158.14 chr19:11245878:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2164:13963:13049 . NO_LDAS 0.1007 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr9--chr19]"]

DNAI4--FAM78A 1 0 1.00 0.00 ONLY_REF_SPLICE DNAI4^ENSG00000152763.17 chr1:66924662:- FAM78A^ENSG00000126882.13 chr9:131261350:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1294:6585:7217 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr9]"]

DLGAP1--EXOC4 1 0 1.00 0.00 ONLY_REF_SPLICE DLGAP1^ENSG00000170579.17 chr18:4151180:- EXOC4^ENSG00000131558.15 chr7:133630045:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1254:28137:3483 . YES_LDAS 0.1007 GT 1.6402 AG 1.9219 ["INTERCHROMOSOMAL[chr18--chr7]"]

DIAPH3--PKN2 1 0 1.00 0.00 ONLY_REF_SPLICE DIAPH3^ENSG00000139734.19 chr13:60015913:- PKN2^ENSG00000065243.20 chr1:88813557:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2108:42709:5054 . NO_LDAS 0.1007 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr1]"]

DGKZ--SHARPIN 1 0 1.00 0.00 ONLY_REF_SPLICE DGKZ^ENSG00000149091.15 chr11:46345585:+ SHARPIN^ENSG00000179526.17 chr8:144103225:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2205:37513:5598 . YES_LDAS 0.1007 GT 1.5058 AG 1.5219 ["INTERCHROMOSOMAL[chr11--chr8]"]

DGKD--ITPR2 1 0 1.00 0.00 ONLY_REF_SPLICE DGKD^ENSG00000077044.11 chr2:233446796:+ ITPR2^ENSG00000123104.12 chr12:26655852:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1163:29894:16718 . YES_LDAS 0.1007 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr2--chr12]"]

DGKD--DHX34 1 0 1.00 0.00 ONLY_REF_SPLICE DGKD^ENSG00000077044.11 chr2:233441995:+ DHX34^ENSG00000134815.19 chr19:47379710:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1149:24060:3724 . NO_LDAS 0.1007 GT 1.7465 AG 1.2729 ["INTERCHROMOSOMAL[chr2--chr19]"]

DENND4B--PHC1 1 0 0.50 0.00 INCL_NON_REF_SPLICE DENND4B^ENSG00000198837.10 chr1:153934797:- PHC1^ENSG00000111752.11 chr12:8932733:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1204:5207:7809 . YES_LDAS 0.0504 GT 1.5656 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr12]"]

DDX17--ITPRID2 1 0 1.00 0.00 ONLY_REF_SPLICE DDX17^ENSG00000100201.23 chr22:38501130:- ITPRID2^ENSG00000138434.17 chr2:181921948:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2164:51835:23848 . YES_LDAS 0.1007 GT 1.8256 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr2]"]

DCXR--NUMA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DCXR^ENSG00000169738.8 chr17:82036969:- NUMA1^ENSG00000137497.18 chr11:72014879:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2114:27028:16974 . YES_LDAS 0.1007 GC 1.7232 AG 1.9219 ["INTERCHROMOSOMAL[chr17--chr11]"]

DCUN1D4--AL445363.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE DCUN1D4^ENSG00000109184.15 chr4:51843712:+ AL445363.1^ENSG00000259002.2 chr14:34546139:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1261:32030:29391 . YES_LDAS 0.0504 GT 1.9899 AG 1.5058 ["INTERCHROMOSOMAL[chr4--chr14]"]

DBF4--LUC7L2 1 0 1.00 0.00 ONLY_REF_SPLICE DBF4^ENSG00000006634.8 chr7:87878133:+ LUC7L2^ENSG00000146963.18 chr7:139376062:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2289:6557:14347 . YES_LDAS 0.1007 GT 1.5546 AG 1.9656 ["INTRACHROMOSOMAL[chr7:51.43Mb]"]

CUTA--ATG2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE CUTA^ENSG00000112514.18 chr6:33417634:- ATG2B^ENSG00000066739.12 chr14:96363042:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2165:26149:15068 . NO_LDAS 0.1007 GT 1.5058 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr14]"]

CU633906.2--IKZF3 1 0 0.25 0.00 ONLY_REF_SPLICE CU633906.2^ENSG00000278903.3 chr21:6318604:+ IKZF3^ENSG00000161405.17 chr17:39792933:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1155:49283:26187 . NO_LDAS 0.0252 GT 1.6895 AG 1.7465 ["INTERCHROMOSOMAL[chr21--chr17]"]

CTSC--RAB38 1 0 1.00 0.00 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88300530:- RAB38^ENSG00000123892.12 chr11:88149955:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2153:47138:17759 . YES_LDAS 0.1007 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019"

Babiceanu_Normal

ChimerSeq

Greger_Normal

INTRACHROMOSOMAL[chr11:0.09Mb]

NEIGHBORS[89626]]

CTSC--RAB38 1 0 1.00 0.00 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88290402:- RAB38^ENSG00000123892.12 chr11:88149955:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2233:30264:20403 . NO_LDAS 0.1007 GT 1.6402 AG 1.8062 ["GTEx_recurrent_StarF2019"

Babiceanu_Normal

ChimerSeq

Greger_Normal

INTRACHROMOSOMAL[chr11:0.09Mb]

NEIGHBORS[89626]]

CREBZF--HIKESHI 1 0 1.00 0.00 ONLY_REF_SPLICE CREBZF^ENSG00000137504.14 chr11:85663815:- HIKESHI^ENSG00000149196.16 chr11:86337379:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2203:21721:17423 . YES_LDAS 0.1007 GT 1.7465 AG 1.5058 ["INTRACHROMOSOMAL[chr11:0.62Mb]"]

CPT1B--AC103760.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CPT1B^ENSG00000205560.13 chr22:50571154:- AC103760.1^ENSG00000254231.3 chr8:86333992:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:1285:23727:2762 . NO_LDAS 0.1007 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr22--chr8]"]

CPSF6--ITPR2 1 0 1.00 0.00 ONLY_REF_SPLICE CPSF6^ENSG00000111605.18 chr12:69262562:+ ITPR2^ENSG00000123104.12 chr12:26655852:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1215:19363:8787 . YES_LDAS 0.1007 GT 1.9899 AG 1.7056 ["INTRACHROMOSOMAL[chr12:42.41Mb]"]

COX8A--PEX6 1 0 1.00 0.00 ONLY_REF_SPLICE COX8A^ENSG00000176340.4 chr11:63974794:+ PEX6^ENSG00000124587.14 chr6:42975038:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:2232:49967:10165 . YES_LDAS 0.1007 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr6]"]

COX15--DACH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE COX15^ENSG00000014919.13 chr10:99720848:- DACH2^ENSG00000126733.21 chrX:86830028:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2193:46916:4397 . NO_LDAS 0.1007 GT 1.3383 AG 1.3996 ["INTERCHROMOSOMAL[chr10--chrX]"]

CORO7--CLEC16A 1 0 1.00 0.00 ONLY_REF_SPLICE CORO7^ENSG00000262246.6 chr16:4416459:- CLEC16A^ENSG00000038532.16 chr16:11003074:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1262:26732:21717 . YES_LDAS 0.1007 GT 1.2310 AG 1.8892 ["DEEPEST2019"

TumorFusionsNAR2018

ChimerSeq

TCGA_StarF2019

INTRACHROMOSOMAL[chr16:6.52Mb]]

COMMD1--STX18 1 0 1.00 0.00 ONLY_REF_SPLICE COMMD1^ENSG00000173163.10 chr2:62000982:+ STX18^ENSG00000168818.10 chr4:4471706:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1283:33694:17919 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr4]"]

CNOT6--RBM27 1 0 1.00 0.00 ONLY_REF_SPLICE CNOT6^ENSG00000113300.13 chr5:180571432:+ RBM27^ENSG00000091009.8 chr5:146251711:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1257:49607:21909 . YES_LDAS 0.1007 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr5:34.21Mb]"]

CNOT2--RAB3IP 1 0 1.00 0.00 ONLY_REF_SPLICE CNOT2^ENSG00000111596.14 chr12:70278274:+ RAB3IP^ENSG00000127328.22 chr12:69784720:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2177:12077:16317 . YES_LDAS 0.1007 GT 1.5546 AG 1.6729 ["YOSHIHARA_TCGA"

DEEPEST2019

TumorFusionsNAR2018

ChimerSeq

TCGA_StarF2019

INTRACHROMOSOMAL[chr12:0.42Mb]]

CNOT1--IFI16 1 0 1.00 0.00 ONLY_REF_SPLICE CNOT1^ENSG00000125107.19 chr16:58549719:- IFI16^ENSG00000163565.19 chr1:159010003:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2153:9488:16574 . YES_LDAS 0.1007 GT 1.5546 AG 1.3710 ["INTERCHROMOSOMAL[chr16--chr1]"]

CLNK--RBM18 1 0 1.00 0.00 ONLY_REF_SPLICE CLNK^ENSG00000109684.15 chr4:10501256:- RBM18^ENSG00000119446.14 chr9:122242043:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2274:31679:7441 . YES_LDAS 0.1007 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr9]"]

CLIP1--KNTC1 1 0 1.00 0.00 ONLY_REF_SPLICE CLIP1^ENSG00000130779.22 chr12:122360959:- KNTC1^ENSG00000184445.12 chr12:122534664:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1274:37032:5246 . YES_LDAS 0.1007 GT 1.9086 AG 1.8256 ["ChimerSeq"

INTRACHROMOSOMAL[chr12:0.10Mb]]

CLIC2--RMDN1 1 0 1.00 0.00 ONLY_REF_SPLICE CLIC2^ENSG00000155962.13 chrX:155334371:- RMDN1^ENSG00000176623.12 chr8:86507112:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1185:16127:21540 . YES_LDAS 0.1007 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr8]"]

CLEC2D--KLRG1 1 0 1.00 0.00 ONLY_REF_SPLICE CLEC2D^ENSG00000069493.15 chr12:9669795:+ KLRG1^ENSG00000139187.10 chr12:9008975:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2218:1629:10774 . NO_LDAS 0.1007 GT 1.8892 AG 1.9656 ["HGNC_GENEFAM"

INTRACHROMOSOMAL[chr12:0.65Mb]]

CLEC16A--IL21R 1 0 1.00 0.00 ONLY_REF_SPLICE CLEC16A^ENSG00000038532.16 chr16:11061022:+ IL21R^ENSG00000103522.16 chr16:27430056:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1216:5965:10341 . YES_LDAS 0.1007 GT 1.9656 AG 1.7968 ["INTRACHROMOSOMAL[chr16:16.22Mb]"]

CILP--PRMT5 1 0 1.00 0.00 INCL_NON_REF_SPLICE CILP^ENSG00000138615.6 chr15:65194855:- PRMT5^ENSG00000100462.16 chr14:22924094:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:2127:29857:3003 . YES_LDAS 0.1007 GT 0.9056 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr14]"]

CHST11--MME 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ MME^ENSG00000196549.13 chr3:155183570:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2151:36348:2490 . NO_LDAS 0.1007 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr3]"]

CHMP3--FSBP 1 0 1.00 0.00 ONLY_REF_SPLICE CHMP3^ENSG00000115561.16 chr2:86563304:- FSBP^ENSG00000265817.4 chr8:94380406:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1156:17024:7809 . YES_LDAS 0.1007 GT 1.7819 AG 1.5628 ["INTERCHROMOSOMAL[chr2--chr8]"]

CHCHD3--EXOC4 1 0 1.00 0.00 ONLY_REF_SPLICE CHCHD3^ENSG00000106554.13 chr7:133070142:- EXOC4^ENSG00000131558.15 chr7:133274982:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1116:30773:22149 . YES_LDAS 0.1007 GT 1.9329 AG 1.9656 ["Klijn_CellLines"

DEEPEST2019

TCGA_StarF2019

INTRACHROMOSOMAL[chr7:0.17Mb]]

CERS6--EPC2 1 0 1.00 0.00 ONLY_REF_SPLICE CERS6^ENSG00000172292.15 chr2:168456618:+ EPC2^ENSG00000135999.12 chr2:148690214:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2292:40777:20803 . NO_LDAS 0.1007 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr2:19.67Mb]"]

CDKN1A--VDAC1 1 0 1.00 0.00 ONLY_REF_SPLICE CDKN1A^ENSG00000124762.14 chr6:36678798:+ VDAC1^ENSG00000213585.11 chr5:133993015:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2131:39279:21284 . YES_LDAS 0.1007 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr5]"]

CDK6--CDK14 1 0 1.00 0.00 ONLY_REF_SPLICE CDK6^ENSG00000105810.10 chr7:92725626:- CDK14^ENSG00000058091.17 chr7:90899291:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2134:14019:3564 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["HGNC_GENEFAM"

INTRACHROMOSOMAL[chr7:1.39Mb]]

CD79A--NIPA2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD79A^ENSG00000105369.10 chr19:41877383:+ NIPA2^ENSG00000140157.16 chr15:22838776:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1262:36117:24457 . YES_LDAS 0.1007 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr15]"]

CD74--CYSTM1 1 0 1.00 0.00 ONLY_REF_SPLICE CD74^ENSG00000019582.16 chr5:150412625:- CYSTM1^ENSG00000120306.11 chr5:140194446:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1106:29829:1577 . YES_LDAS 0.1007 GT 1.6402 AG 1.9656 ["INTRACHROMOSOMAL[chr5:10.12Mb]"]

CCT5--SUB1 1 0 1.00 0.00 ONLY_REF_SPLICE CCT5^ENSG00000150753.12 chr5:10250445:+ SUB1^ENSG00000113387.12 chr5:32598961:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2258:7223:11206 . YES_LDAS 0.1007 GT 1.9656 AG 1.5219 ["INTRACHROMOSOMAL[chr5:22.27Mb]"]

CCT5--RBM33 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCT5^ENSG00000150753.12 chr5:10264787:+ RBM33^ENSG00000184863.11 chr7:155680816:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1174:4985:26171 . YES_LDAS 0.1007 AT 1.7968 AC 1.7465 ["INTERCHROMOSOMAL[chr5--chr7]"]

CCT4--TRIM22 1 0 1.00 0.00 ONLY_REF_SPLICE CCT4^ENSG00000115484.15 chr2:61885020:- TRIM22^ENSG00000132274.16 chr11:5698315:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1208:51502:23335 . NO_LDAS 0.1007 GT 1.5058 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr11]"]

CCSAP--STT3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCSAP^ENSG00000154429.11 chr1:229341706:- STT3B^ENSG00000163527.10 chr3:31629298:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2242:32807:11382 . NO_LDAS 0.1007 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr3]"]

CCDC88B--SLC35A3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC88B^ENSG00000168071.22 chr11:64351311:+ SLC35A3^ENSG00000117620.15 chr1:99970560:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1258:35728:13882 . NO_LDAS 0.1007 GT 1.6402 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr1]"]

CCDC88B--MYO18B 1 0 0.17 0.00 INCL_NON_REF_SPLICE CCDC88B^ENSG00000168071.22 chr11:64353459:+ MYO18B^ENSG00000133454.16 chr22:25846102:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2208:45344:18913 . NO_LDAS 0.0171 GT 1.8062 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr22]"]

CCDC7--PICALM 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC7^ENSG00000216937.13 chr10:32474023:+ PICALM^ENSG00000073921.18 chr11:86031611:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1164:26418:10117 . YES_LDAS 0.1007 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr11]"]

CCDC174--UBAP2L 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC174^ENSG00000154781.16 chr3:14672048:+ UBAP2L^ENSG00000143569.19 chr1:154261089:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1166:4948:14250 . NO_LDAS 0.1007 GT 1.2419 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr1]"]

CBX5--SERINC2 1 0 1.00 0.00 ONLY_REF_SPLICE CBX5^ENSG00000094916.16 chr12:54280008:- SERINC2^ENSG00000168528.12 chr1:31432967:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2261:37134:25866 . NO_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr1]"]

CBFA2T3--ACSF3 1 0 1.00 0.00 ONLY_REF_SPLICE CBFA2T3^ENSG00000129993.15 chr16:88976657:- ACSF3^ENSG00000176715.17 chr16:89100662:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1159:36746:3339 . YES_LDAS 0.1007 GT 1.4566 AG 1.7465 ["DEEPEST2019"

ChimerPub

TumorFusionsNAR2018

TCGA_StarF2019

INTRACHROMOSOMAL[chr16:0.11Mb]]

CAPZB--MICOS10P2 1 0 0.50 0.00 INCL_NON_REF_SPLICE CAPZB^ENSG00000077549.19 chr1:19485436:- MICOS10P2^ENSG00000270714.1 chr17:64747428:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2146:26639:21300 . NO_LDAS 0.0504 GT 1.6402 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr17]"]

CAMK1D--PTER 1 0 1.00 0.00 ONLY_REF_SPLICE CAMK1D^ENSG00000183049.13 chr10:12769799:+ PTER^ENSG00000165983.15 chr10:16511046:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2210:28313:24969 . YES_LDAS 0.1007 GT 1.9329 AG 1.5656 ["INTRACHROMOSOMAL[chr10:3.60Mb]"]

CALCOCO1--GOLGA3 1 0 1.00 0.00 ONLY_REF_SPLICE CALCOCO1^ENSG00000012822.16 chr12:53724645:- GOLGA3^ENSG00000090615.15 chr12:132777805:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2113:13307:9956 . YES_LDAS 0.1007 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr12:79.04Mb]"]

C5orf63--PHAX 1 0 1.00 0.00 ONLY_REF_SPLICE C5orf63^ENSG00000164241.13 chr5:127058882:- PHAX^ENSG00000164902.14 chr5:126617250:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2224:36903:27645 . YES_LDAS 0.1007 GT 1.8062 AG 1.7819 ["INTRACHROMOSOMAL[chr5:0.42Mb]"]

BX571818.1--TMEM200A 1 0 1.00 0.00 ONLY_REF_SPLICE BX571818.1^ENSG00000285417.1 chr1:206053265:+ TMEM200A^ENSG00000164484.12 chr6:130440407:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1146:36635:4909 . NO_LDAS 0.1007 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr6]"]

BTG2--KARS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BTG2^ENSG00000159388.6 chr1:203308139:+ KARS1^ENSG00000065427.15 chr16:75641634:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:2242:1120:10021 . NO_LDAS 0.1007 GT 1.5329 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr16]"]

BRI3BP--UBC 1 0 1.00 0.00 ONLY_REF_SPLICE BRI3BP^ENSG00000184992.13 chr12:124994003:+ UBC^ENSG00000150991.15 chr12:124913774:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1155:36339:21444 . YES_LDAS 0.1007 GT 1.7819 AG 1.9329 ["ChimerSeq"

INTRACHROMOSOMAL[chr12:0.08Mb]

LOCAL_INVERSION:+:-:[76277]]

BOLA2--ZRANB2-AS2 1 0 0.50 0.00 INCL_NON_REF_SPLICE BOLA2^ENSG00000183336.8 chr16:29454016:- ZRANB2-AS2^ENSG00000229956.11 chr1:71238144:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1291:48164:17070 . YES_LDAS 0.0504 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr1]"]

BLCAP--DCTD 1 0 1.00 0.00 ONLY_REF_SPLICE BLCAP^ENSG00000166619.15 chr20:37527793:- DCTD^ENSG00000129187.15 chr4:182915575:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2144:11679:3836 . YES_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr4]"]

BIRC6--DIS3L2 1 0 1.00 0.00 ONLY_REF_SPLICE BIRC6^ENSG00000115760.14 chr2:32357486:+ DIS3L2^ENSG00000144535.20 chr2:232014835:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1279:16312:12504 . YES_LDAS 0.1007 GT 1.7465 AG 1.7465 ["INTRACHROMOSOMAL[chr2:199.34Mb]"]

BICRAL--ZSWIM7 1 0 1.00 0.00 ONLY_REF_SPLICE BICRAL^ENSG00000112624.12 chr6:42782101:+ ZSWIM7^ENSG00000214941.8 chr17:15987368:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:2156:33269:21733 . YES_LDAS 0.1007 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr17]"]

BAZ1A--BAZ1B 1 0 1.00 0.00 ONLY_REF_SPLICE BAZ1A^ENSG00000198604.11 chr14:34792775:- BAZ1B^ENSG00000009954.11 chr7:73470483:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:2227:29376:25850 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["HGNC_GENEFAM"

INTERCHROMOSOMAL[chr14--chr7]]

B3GNTL1--FOXK2 1 0 1.00 0.00 ONLY_REF_SPLICE B3GNTL1^ENSG00000175711.8 chr17:83035035:- FOXK2^ENSG00000141568.21 chr17:82563354:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2195:16968:11366 . YES_LDAS 0.1007 GT 1.6402 AG 1.9656 ["INTRACHROMOSOMAL[chr17:0.30Mb]"]

ATP5ME--MKI67 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP5ME^ENSG00000169020.10 chr4:672504:- MKI67^ENSG00000148773.14 chr10:128119319:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1160:7417:4781 . NO_LDAS 0.1007 GT 1.7968 AG 1.4566 ["INTERCHROMOSOMAL[chr4--chr10]"]

ATP5ME--L3MBTL3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP5ME^ENSG00000169020.10 chr4:672504:- L3MBTL3^ENSG00000198945.8 chr6:130022227:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1168:2304:14090 . NO_LDAS 0.1007 GT 1.7968 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr6]"]

ATP5F1B--UBB 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP5F1B^ENSG00000110955.9 chr12:56640108:- UBB^ENSG00000170315.14 chr17:16381989:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2183:46398:6608 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr17]"]

ATP11A--CUL4A 1 0 1.00 0.00 ONLY_REF_SPLICE ATP11A^ENSG00000068650.18 chr13:112842379:+ CUL4A^ENSG00000139842.15 chr13:113253082:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1267:10949:22342 . YES_LDAS 0.1007 GT 1.8892 AG 1.8323 ["ChimerSeq"

TCGA_StarF2019

INTRACHROMOSOMAL[chr13:0.32Mb]]

ATG13--MLLT10 1 0 1.00 0.00 ONLY_REF_SPLICE ATG13^ENSG00000175224.16 chr11:46630100:+ MLLT10^ENSG00000078403.17 chr10:21586294:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1254:14425:3307 . YES_LDAS 0.1007 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr10]"]

ATAD3B--NPAS3 1 0 1.00 0.00 ONLY_REF_SPLICE ATAD3B^ENSG00000160072.20 chr1:1477350:+ NPAS3^ENSG00000151322.20 chr14:33578239:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1140:46001:22646 . NO_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr14]"]

ATAD3B--AC124947.1 1 0 1.00 0.00 ONLY_REF_SPLICE ATAD3B^ENSG00000160072.20 chr1:1477350:+ AC124947.1^ENSG00000257252.6 chr12:93339736:- &rna_s1221_S42@LH00166:156:2373MLLT3:7:1106:21563:12184 . NO_LDAS 0.1007 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr12]"]

ATAD2B--BIRC6 1 0 1.00 0.00 ONLY_REF_SPLICE ATAD2B^ENSG00000119778.15 chr2:23857415:- BIRC6^ENSG00000115760.14 chr2:32514990:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:2262:26445:17631 . YES_LDAS 0.1007 GT 1.8892 AG 1.5546 ["INTRACHROMOSOMAL[chr2:8.43Mb]"]

ARNT--FOXP1 1 0 1.00 0.00 ONLY_REF_SPLICE ARNT^ENSG00000143437.21 chr1:150816259:- FOXP1^ENSG00000114861.23 chr3:71047089:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2243:43144:4589 . NO_LDAS 0.1007 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr3]"]

ARMC10--TANK 1 0 1.00 0.00 ONLY_REF_SPLICE ARMC10^ENSG00000170632.14 chr7:103083830:+ TANK^ENSG00000136560.14 chr2:161230971:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:2262:42654:16558 . YES_LDAS 0.1007 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr2]"]

ARMC10--PSMC2 1 0 1.00 0.00 ONLY_REF_SPLICE ARMC10^ENSG00000170632.14 chr7:103075881:+ PSMC2^ENSG00000161057.13 chr7:103361957:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2156:32797:24505 . YES_LDAS 0.1007 GT 1.8892 AG 1.7465 ["INTRACHROMOSOMAL[chr7:0.23Mb]"]

ARID4B--HMGB3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARID4B^ENSG00000054267.22 chr1:235229242:- HMGB3^ENSG00000029993.15 chrX:150987862:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2209:46500:2714 . YES_LDAS 0.1007 GT 1.6895 AG 1.2867 ["INTERCHROMOSOMAL[chr1--chrX]"]

ARID1B--ZDHHC14 1 0 1.00 0.00 ONLY_REF_SPLICE ARID1B^ENSG00000049618.24 chr6:157167185:+ ZDHHC14^ENSG00000175048.17 chr6:157542585:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2118:20685:24024 . YES_LDAS 0.1007 GT 1.9329 AG 1.8062 ["TCGA_StarF2019"

INTRACHROMOSOMAL[chr6:0.17Mb]]

ARHGEF26-AS1--ANKRD36 1 0 0.50 0.00 ONLY_REF_SPLICE ARHGEF26-AS1^ENSG00000243069.8 chr3:154119686:- ANKRD36^ENSG00000135976.20 chr2:97224806:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1214:41137:17711 . YES_LDAS 0.0504 GC 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr2]"]

ARHGAP6--ARFIP1 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP6^ENSG00000047648.23 chrX:11664241:- ARFIP1^ENSG00000164144.16 chr4:152829625:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:1119:20167:8835 . NO_LDAS 0.1007 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr4]"]

ARF4--ITPR2 1 0 1.00 0.00 ONLY_REF_SPLICE ARF4^ENSG00000168374.11 chr3:57597074:- ITPR2^ENSG00000123104.12 chr12:26655852:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:2248:31318:12039 . NO_LDAS 0.1007 GT 1.8323 AG 1.7056 ["INTERCHROMOSOMAL[chr3--chr12]"]

ARF3--SNX5 1 0 1.00 0.00 ONLY_REF_SPLICE ARF3^ENSG00000134287.10 chr12:48939655:- SNX5^ENSG00000089006.17 chr20:17961326:- &rna_s1221_S42@LH00166:156:2373MLLT3:8:2273:51262:1833 . YES_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr20]"]

APLP2--CERS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE APLP2^ENSG00000084234.18 chr11:130121799:+ CERS3^ENSG00000154227.14 chr15:100402823:- &rna_s1221_S42@LH00166:156:2373MLLT3:6:1266:1055:7345 . NO_LDAS 0.1007 GT 1.7819 AG 0.9968 ["INTERCHROMOSOMAL[chr11--chr15]"]

AP1B1--AC025031.2 1 0 1.00 0.00 ONLY_REF_SPLICE AP1B1^ENSG00000100280.17 chr22:29334265:- AC025031.2^ENSG00000258096.1 chr12:46373313:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:2259:45890:15532 . YES_LDAS 0.1007 GT 1.9086 AG 1.7056 ["INTERCHROMOSOMAL[chr22--chr12]"]

AP003721.1--ZMIZ1 1 0 1.00 0.00 ONLY_REF_SPLICE AP003721.1^ENSG00000256196.2 chr11:60925219:- ZMIZ1^ENSG00000108175.18 chr10:79277181:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1113:27342:18801 . NO_LDAS 0.1007 GT 1.8256 AG 1.4295 ["INTERCHROMOSOMAL[chr11--chr10]"]

AP000845.1--NT5C3A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP000845.1^ENSG00000263884.1 chr18:268873:+ NT5C3A^ENSG00000122643.22 chr7:33015870:- &rna_s1221_S42@LH00166:156:2373MLLT3:5:1280:31484:4477 . YES_LDAS 0.1007 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr18--chr7]"]

ANKRD44--KANSL1L 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD44^ENSG00000065413.20 chr2:197310578:- KANSL1L^ENSG00000144445.17 chr2:210154611:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:2172:45224:1112 . NO_LDAS 0.1007 GT 1.7056 AG 1.7465 ["INTRACHROMOSOMAL[chr2:12.71Mb]"]

AL139260.1--SEC61A2 1 0 1.00 0.00 ONLY_REF_SPLICE AL139260.1^ENSG00000228436.3 chr1:38860239:+ SEC61A2^ENSG00000065665.21 chr10:12156907:+ &rna_s1221_S42@LH00166:156:2373MLLT3:6:2288:48997:1144 . YES_LDAS 0.1007 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr10]"]

AL133215.2--TAF5L 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL133215.2^ENSG00000273162.1 chr10:101060110:- TAF5L^ENSG00000135801.10 chr1:229602919:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:1182:19233:7825 . YES_LDAS 0.1007 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr1]"]

AGO2--RCOR3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AGO2^ENSG00000123908.12 chr8:140635485:- RCOR3^ENSG00000117625.14 chr1:211303256:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2146:13945:1673 . NO_LDAS 0.1007 GT 1.2867 AG 1.7056 ["INTERCHROMOSOMAL[chr8--chr1]"]

AGFG1--AP3M1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AGFG1^ENSG00000173744.18 chr2:227552117:+ AP3M1^ENSG00000185009.13 chr10:74122031:- &rna_s1221_S42@LH00166:156:2373MLLT3:3:1175:17643:14619 . NO_LDAS 0.1007 GT 1.8323 AG 1.7232 ["INTERCHROMOSOMAL[chr2--chr10]"]

ADK--AC008429.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE ADK^ENSG00000156110.15 chr10:74314745:+ AC008429.2^ENSG00000253785.1 chr5:172975808:+ &rna_s1221_S42@LH00166:156:2373MLLT3:3:1232:21415:24424 . YES_LDAS 0.0504 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr5]"]

ADGRE5--CPSF6 1 0 1.00 0.00 ONLY_REF_SPLICE ADGRE5^ENSG00000123146.20 chr19:14391079:+ CPSF6^ENSG00000111605.18 chr12:69251129:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:1256:32307:17182 . YES_LDAS 0.1007 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr12]"]

ADAT2--CD40 1 0 1.00 0.00 ONLY_REF_SPLICE ADAT2^ENSG00000189007.16 chr6:143450563:- CD40^ENSG00000101017.14 chr20:46128138:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:1294:2220:2346 . YES_LDAS 0.1007 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr20]"]

ACTR3C--AC006008.1 1 0 1.00 0.00 ONLY_REF_SPLICE ACTR3C^ENSG00000106526.10 chr7:150284753:- AC006008.1^ENSG00000286912.1 chr7:150237608:- &rna_s1221_S42@LH00166:156:2373MLLT3:4:2130:9164:15051 . YES_LDAS 0.1007 GT 1.9899 AG 1.7968 ["INTRACHROMOSOMAL[chr7:0.01Mb]"

NEIGHBORS[6308]]

ACTN4--EIF3K 1 0 1.00 0.00 ONLY_REF_SPLICE ACTN4^ENSG00000130402.13 chr19:38706131:+ EIF3K^ENSG00000178982.10 chr19:38624077:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1212:29931:8418 . YES_LDAS 0.1007 GT 1.9086 AG 1.8892 ["TumorFusionsNAR2018"

ChimerSeq

TCGA_StarF2019

INTRACHROMOSOMAL[chr19:0.01Mb]

LOCAL_REARRANGEMENT:+:[10694]]

AC244258.1--DST 1 0 0.50 0.00 ONLY_REF_SPLICE AC244258.1^ENSG00000283453.2 chr6:60283705:+ DST^ENSG00000151914.21 chr6:56900621:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1178:27213:9956 . YES_LDAS 0.0504 GT 1.9899 AG 1.9086 ["INTRACHROMOSOMAL[chr6:3.33Mb]"]

AC104809.1--RPL19 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC104809.1^ENSG00000223991.1 chr2:240982291:- RPL19^ENSG00000108298.12 chr17:39204105:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:2270:24041:28718 . NO_LDAS 0.1007 GT 1.7056 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr17]"]

AC091390.3--RPA3 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC091390.3^ENSG00000239969.5 chr7:102376322:+ RPA3^ENSG00000106399.11 chr7:7638721:- &rna_s1221_S42@LH00166:156:2373MLLT3:2:1147:37208:12055 . NO_LDAS 0.0504 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr7:94.65Mb]"]

AC078883.1--SYNE2 1 0 1.00 0.00 ONLY_REF_SPLICE AC078883.1^ENSG00000225205.5 chr2:172495375:- SYNE2^ENSG00000054654.19 chr14:63909098:+ &rna_s1221_S42@LH00166:156:2373MLLT3:4:1159:39436:21557 . YES_LDAS 0.1007 GT 1.9329 AG 1.5058 ["INTERCHROMOSOMAL[chr2--chr14]"]

AC068888.1--IGH-@-ext 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC068888.1^ENSG00000257337.7 chr12:53039232:- IGH-@-ext^IGH-.g@-ext chr14:106598608:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:1290:45650:12488 . NO_LDAS 0.0504 GG 1.5546 CC 1.5628 ["INTERCHROMOSOMAL[chr12--chr14]"]

AC062037.3--TRIP4 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC062037.3^ENSG00000286011.1 chr2:85421713:+ TRIP4^ENSG00000103671.10 chr15:64395452:+ &rna_s1221_S42@LH00166:156:2373MLLT3:7:2261:32492:9043 . NO_LDAS 0.1007 GT 1.7232 AG 1.4295 ["INTERCHROMOSOMAL[chr2--chr15]"]

AC009403.1--ODR4 1 0 1.00 0.00 ONLY_REF_SPLICE AC009403.1^ENSG00000216895.9 chr7:155643468:- ODR4^ENSG00000157181.16 chr1:186406083:+ &rna_s1221_S42@LH00166:156:2373MLLT3:1:1226:18734:11414 . YES_LDAS 0.1007 GT 1.6402 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr1]"]

AC008740.1--CRYM-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21315884:+ &rna_s1221_S42@LH00166:156:2373MLLT3:8:2152:45955:25866 . YES_LDAS 0.1007 GT 1.7232 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.01Mb]"

LOCAL_REARRANGEMENT:+:[8102]]

AC008035.1--LRIG3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008035.1^ENSG00000272369.1 chr12:46652552:+ LRIG3^ENSG00000139263.12 chr12:58890796:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:2197:26556:4204 . YES_LDAS 0.1007 GT 1.9656 AG 1.8323 ["INTRACHROMOSOMAL[chr12:12.22Mb]"]

AC006064.4--TNRC18 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC006064.4^ENSG00000269968.1 chr12:6538260:- TNRC18^ENSG00000182095.14 chr7:5345796:- &rna_s1221_S42@LH00166:156:2373MLLT3:1:1239:5225:20787 . NO_LDAS 0.1007 GT 1.7465 AG 1.2310 ["INTERCHROMOSOMAL[chr12--chr7]"]

ABCD3--FNDC3B 1 0 1.00 0.00 ONLY_REF_SPLICE ABCD3^ENSG00000117528.14 chr1:94418588:+ FNDC3B^ENSG00000075420.13 chr3:172330541:+ &rna_s1221_S42@LH00166:156:2373MLLT3:2:2262:44993:2891 . YES_LDAS 0.1007 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr3]"]

AACS--IRAK3 1 0 1.00 0.00 ONLY_REF_SPLICE AACS^ENSG00000081760.17 chr12:125107268:+ IRAK3^ENSG00000090376.11 chr12:66203711:+ &rna_s1221_S42@LH00166:156:2373MLLT3:5:1175:48849:7329 . YES_LDAS 0.1007 GT 1.8062 AG 1.9219 ["INTRACHROMOSOMAL[chr12:58.81Mb]"]

449 rows