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Filename
multiqc_general_stats.json
Full Path
s3://natera-platform-sandbox/users/smarinkovic/rnapipeline_vcf_bgzip_final_test/QC/multiqc/multiqc_data/multiqc_general_stats.json
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37.2 KB
Workflow Run
rnapipeline_vcf_bgzip_final_test
Published
Jun 03, 2026 6:26 AM

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{
  "source_file": "multiqc_general_stats.txt",
  "total_samples": 5,
  "metrics": [
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      "FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-median_sequence_length": null,
      "Kallisto_mqc-generalstats-kallisto-fragment_length": null,
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      "Picard: InsertSizeMetrics_mqc-generalstats-picard_insertsizemetrics-summed_mean": 661.036433,
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      "Sample": "rna_s1221_S42_1",
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      "Custom content: RNA contamination_mqc-generalstats-custom_content_rna_contamination-contamination_pct": null,
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      "Kallisto_mqc-generalstats-kallisto-fragment_length": 175.9,
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