Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/e754d1dbb1f9187c7c568eac722643/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/e754d1dbb1f9187c7c568eac722643/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/testing/cgp_rna_exp0022/B2373MLLT3/nfcore_rnafusion_1M_4/seqtk_downsample/rna_s1221_S42_rna_s1221_S42_R2_001.fastq.gz
  Downloading: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/testing/cgp_rna_exp0022/B2373MLLT3/nfcore_rnafusion_1M_4/seqtk_downsample/rna_s1221_S42_rna_s1221_S42_R1_001.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory