NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) - rnapipeline_vcf_bgzip_final_test - Workflow Tracker

Runs
rnapipeline_.._final_test
Tasks
GATK4_MARKDUPLICATES (rna_s1221_S42)

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Task Info

Status: succeeded
Hash: b0877c739e6e
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: rna_s1221_S42
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: ed/8d0d96
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/8d0d96a6ef1dae44f84274179cfa2d
Native ID: nf-ed8d0d96a6ef1dae44f84274179cfa2d-df819

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 2
Memory (peak / alloc): 34.4 GB / 74.0 GB
Process I/O (rchar / wchar): 1.9 GB / 1.0 GB
Disk I/O (read / write): - / 1.0 GB
Host: i-034a725b82a2e2d3e ( spot)

Runtime

Submitted: Jun 03, 2026 6:01:48 AM
Completed: Jun 03, 2026 6:04:19 AM
Total Duration: 2m 30s

Phases

Queue: 16s
Execution: 1m 47s
Stage/Unstage: 27s