| succeeded | COPY_INPUT_TO_OUTDIR (copy_input) | 6s | 5s | - | - | 3.2 MB | 126% | 70.6 KB | 1.1 KB | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1221_S42) | 6s | 4s | 0s | 1s | 13.9 MB | 1465% | 38.7 MB | 130.6 KB | 0 bytes | 148.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) | 1m 47s | 37s | 52s | 18s | 4.8 GB | 101% | 5.2 GB | 65.1 MB | 0 bytes | 65.1 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1221_S42) | 7s | 6s | - | - | 14.0 MB | 117% | 1.1 MB | 5.8 KB | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1221_S42) | 3s | 1s | 0s | 1s | 0 bytes | 123% | 64.3 KB | 929 bytes | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) | 1m 32s | 11s | 8s | 1m 12s | 559.3 MB | 242% | 223.9 MB | 19.4 MB | 162.1 MB | 19.5 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) | 12s | 2s | 6s | 4s | 23.1 MB | 167% | 926.4 MB | 2.3 MB | 0 bytes | 2.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) | 4m 33s | 27s | 2m 42s | 1m 24s | 35.6 GB | 997% | 45.8 GB | 9.8 GB | 2.8 GB | 9.6 GB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) | 1m 9s | 1s | 1m 1s | 7s | 683.8 MB | 202% | 1.2 GB | 4.0 MB | 0 bytes | 4.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) | 16s | 12s | 3s | 1s | 103.2 MB | 101% | 21.4 MB | 3.2 MB | 0 bytes | 3.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) | 2m 36s | 23s | 2m 5s | 8s | 2.2 GB | 103% | 1.5 GB | 11.2 MB | 0 bytes | 11.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) | 11m 5s | 46s | 8m 28s | 1m 50s | 35.9 GB | 218% | 40.2 GB | 3.7 GB | 1.6 GB | 99.4 MB | 1 |
| failed | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) | 1m 59s | 1m 59s | - | - | - | - | - | - | - | - | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) | 14s | 8s | 2s | 3s | 128.1 MB | 420% | 70.9 MB | 25.1 MB | 0 bytes | 25.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) | 37s | 11s | 18s | 8s | 3.1 GB | 101% | 1.3 GB | 27.7 MB | 4.0 KB | 27.7 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) | 3m 13s | 41s | 2m 26s | 6s | 2.8 GB | 176% | 1.7 GB | 605.9 MB | 0 bytes | 605.9 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) | 1m 36s | 0s | 1m 26s | 10s | 1.4 GB | 300% | 1.5 GB | 19.3 MB | 1.4 GB | 19.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) | 5s | 3s | 0s | 1s | 13.6 MB | 1166% | 4.6 MB | 3.7 KB | 0 bytes | 8.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) | 8s | 5s | 1s | 2s | 13.2 MB | 246% | 44.3 MB | 1.3 MB | 0 bytes | 1.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC | 22s | 15s | 3s | 3s | 120.3 MB | 207% | 71.6 MB | 22.9 MB | 0 bytes | 23.1 MB | 1 |