NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) - rnapipeline_vcf_bgzip_test - Workflow Tracker

Runs
rnapipeline_.._bgzip_test
Tasks
GATK4_MARKDUPLICATES (rna_s1221_S42)

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Task Info

Status: succeeded
Hash: c2678b0fe442
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: rna_s1221_S42
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: 36/17ff62
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/17ff620bae81001efa734f313dd819
Native ID: nf-3617ff620bae81001efa734f313dd819-a592d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 2
Memory (peak / alloc): 41.9 GB / 74.0 GB
Process I/O (rchar / wchar): 1.9 GB / 1.0 GB
Disk I/O (read / write): - / 1.0 GB
Host: i-0be46d277aef3a7e5 ( spot)

Runtime

Submitted: Jun 02, 2026 8:27:58 AM
Completed: Jun 02, 2026 8:30:14 AM
Total Duration: 2m 15s

Phases

Queue: 16s
Execution: 1m 42s
Stage/Unstage: 17s