Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/0d6ef2d100723e3d49f92f6a034234/rna_s1221_S42.Aligned.sortedByCoord.out.bam.bai Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/e1df0cee2f7bd018ca5538c27962fe/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/e1df0cee2f7bd018ca5538c27962fe/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/77f6521aa147bd4bf2fd365c3f16aa/rna_s1221_S42.Aligned.sortedByCoord.out.bam ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: rna_s1221_S42.Aligned.sortedByCoord.out.bam.bai Load BAM file ... Done