| succeeded | COPY_INPUT_TO_OUTDIR (copy_input) | 9s | 8s | - | - | 3.2 MB | 166% | 69.6 KB | 1.1 KB | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1221_S42) | 6s | 4s | 0s | 1s | 12.9 MB | 449% | 38.7 MB | 130.6 KB | 0 bytes | 148.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) | 2m 8s | 46s | 1m 6s | 16s | 4.8 GB | 101% | 5.2 GB | 65.1 MB | 0 bytes | 65.1 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1221_S42) | 3s | 2s | - | - | 12.3 MB | 80% | 1.1 MB | 5.8 KB | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1221_S42) | 3s | 2s | 0s | 0s | 0 bytes | 123% | 64.3 KB | 932 bytes | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) | 1m 53s | 14s | 11s | 1m 27s | 575.4 MB | 165% | 224.0 MB | 19.4 MB | 172.3 MB | 19.5 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) | 16s | 3s | 7s | 6s | 24.1 MB | 141% | 926.4 MB | 2.3 MB | 0 bytes | 2.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) | 5m 55s | 48s | 3m 28s | 1m 39s | 35.6 GB | 1128% | 45.8 GB | 9.8 GB | 2.8 GB | 9.6 GB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) | 1m 4s | 1s | 57s | 6s | 632.9 MB | 200% | 1.2 GB | 4.0 MB | 0 bytes | 4.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) | 5s | 1s | 2s | 2s | 103.1 MB | 102% | 21.4 MB | 3.2 MB | 0 bytes | 3.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) | 2m 11s | 1s | 2m 1s | 9s | 2.3 GB | 102% | 1.5 GB | 11.2 MB | 0 bytes | 11.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) | 11m 25s | 24s | 9m 27s | 1m 33s | 35.9 GB | 218% | 40.2 GB | 3.6 GB | 2.1 GB | 99.4 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) | 6s | 3s | 0s | 2s | 15.1 MB | 910% | 34.0 MB | 46.8 KB | 0 bytes | 48.0 KB | 2 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) | 16s | 10s | 2s | 3s | 127.5 MB | 255% | 70.9 MB | 25.1 MB | 0 bytes | 25.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) | 40s | 4s | 26s | 10s | 3.2 GB | 100% | 1.3 GB | 27.7 MB | 4.0 KB | 27.7 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) | 3m 45s | 4s | 3m 32s | 9s | 2.7 GB | 176% | 1.7 GB | 605.9 MB | 0 bytes | 605.9 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) | 2m 19s | 3s | 2m 4s | 12s | 1.4 GB | 266% | 1.5 GB | 19.3 MB | 1.4 GB | 19.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) | 6s | 4s | 0s | 1s | 12.6 MB | 908% | 4.6 MB | 3.7 KB | 0 bytes | 8.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) | 9s | 5s | 1s | 3s | 225.2 MB | 206% | 44.3 MB | 1.3 MB | 0 bytes | 1.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC | 8s | 1s | 3s | 3s | 126.4 MB | 214% | 71.6 MB | 22.9 MB | 0 bytes | 23.1 MB | 1 |