succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_NORMAL (1029_BGFD-N1-BDNA-1) 8m 10s 1m 26s 5m 58s 46s 1.0 GB 107% 5.1 GB 1.2 MB 5.1 GB 1.2 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_NORMAL (1029_BGFD-N1-BDNA-1) 8m 5s 1m 27s 5m 57s 41s 1.0 GB 107% 4.8 GB 1.2 MB 340.7 MB 1.2 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_NORMAL (1029_BGFD-N1-BDNA-1) 2m 41s 1m 26s 30s 45s 543.3 MB 134% 581.7 MB 734.3 KB 51.1 MB 744.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_NORMAL (1029_BGFD-N1-BDNA-1) 9m 25s 1m 26s 6m 29s 1m 30s 642.7 MB 106% 5.3 GB 1.2 MB 4.7 GB 1.2 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1) 6m 36s 1m 26s 2m 1s 3m 9s 545.4 MB 111% 2.0 GB 735.7 KB 134.2 MB 748.0 KB 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1) - 1m 38s - - - - - - - - 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1) - 1m 28s - - - - - - - - 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GETPILEUPSUMMARIES_TUMOR (1029_BGFD-T1-TDNA-1) - 1m 28s - - - - - - - - 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) - 59s - - - - - - - - 3
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) - 49s - - - - - - - - 3
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) - 1m 0s - - - - - - - - 3
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MUTECT2_PAIRED (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) - 1m 10s - - - - - - - - 3
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TIDDIT:TIDDIT_NORMAL:TABIX_BGZIP_TIDDIT_SV (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) 14s 12s - - 3.2 MB 114% 506.2 KB 76.2 KB 0 bytes 80.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TIDDIT:TIDDIT_NORMAL:TIDDIT_SV (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) 6m 2s 6s 5m 24s 32s 8.1 GB 287% 36.7 GB 2.1 GB 0 bytes 605.1 MB 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TIDDIT:TIDDIT_TUMOR:TIDDIT_SV (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) - 1m 39s - - - - - - - - 1
failed NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) 2m 56s 25s 2m 31s 0s - - - - - - 3
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) - 1m 49s - - - - - - - - 1
aborted NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSORPRO_MSISOMATIC (1029_BGFD-T1-TDNA-1_vs_1029_BGFD-N1-BDNA-1) - 1m 28s - - - - - - - - 1
succeeded NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (1029_BGFD-N1-BDNA-1) 3m 6s 46s 1m 36s 43s 845.4 MB 352% 25.8 GB 13.3 GB 0 bytes 127.0 MB 1
aborted NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (1029_BGFD-T1-TDNA-1) - 20s - - - - - - - - 2
144 items found |
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