NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

Login

Task Info

Status: succeeded
Hash: 0902ad3c60b1
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: f5/2d67ae
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/2d67aec7e5decd7529ccdd95d1d887
Native ID: nf-f52d67aec7e5decd7529ccdd95d1d887-df0ad

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.7 / 4
Memory (peak / alloc): 3.2 GB / 10.0 GB
Process I/O (rchar / wchar): 640.5 MB / 18.6 MB
Disk I/O (read / write): - / 15.8 MB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:47:58 AM
Completed: Jan 26, 2026 4:49:06 AM
Total Duration: 1m 7s

Phases

Queue: 3s
Execution: 1m 1s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: ba/2c00c1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/2c00c1a858c15843f6d14617f8d41b
Native ID: nf-ba2c00c1a858c15843f6d14617f8d41b-9bb7a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.9 / 4
Memory (peak / alloc): 3.0 GB / 10.0 GB
Process I/O (rchar / wchar): 553.8 MB / 3.6 MB
Disk I/O (read / write): - / 756.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:18:04 AM
Completed: Jan 26, 2026 3:19:03 AM
Total Duration: 58s

Phases

Queue: 3s
Execution: 52s
Stage/Unstage: 3s