NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
BCFTOOLS_ANNOTATE (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 0a1604940756
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: e8/3e76c4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e8/3e76c40b556411abde57f1710dad3f
Native ID: nf-e83e76c40b556411abde57f1710dad3f-f1c9e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 13.2 / 2
Memory (peak / alloc): 288.0 MB / 12.0 GB
Process I/O (rchar / wchar): 47.1 MB / 3.6 MB
Disk I/O (read / write): - / 3.6 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:02:55 AM
Completed: Jan 26, 2026 3:03:02 AM
Total Duration: 6s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 26/64a48c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/64a48c4187f21991b89058b5cd9434
Native ID: nf-2664a48c4187f21991b89058b5cd9434-4ac2b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 12.2 / 2
Memory (peak / alloc): 291.0 MB / 12.0 GB
Process I/O (rchar / wchar): 40.5 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:27 AM
Completed: Jan 26, 2026 2:27:37 AM
Total Duration: 9s

Phases

Queue: 5s
Execution: 2s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: bd/502a4e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/502a4ed9c78c3fbe377bc9165d331c
Native ID: nf-bd502a4ed9c78c3fbe377bc9165d331c-77455

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 12.0 / 2
Memory (peak / alloc): 301.2 MB / 12.0 GB
Process I/O (rchar / wchar): 41.8 MB / 1.7 MB
Disk I/O (read / write): - / 1.7 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:36:35 AM
Completed: Jan 26, 2026 12:36:42 AM
Total Duration: 6s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 1e/baf43d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/baf43d692e5b71e7a6a5494a99580c
Native ID: nf-1ebaf43d692e5b71e7a6a5494a99580c-b96a9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 12.4 / 2
Memory (peak / alloc): 298.8 MB / 12.0 GB
Process I/O (rchar / wchar): 41.8 MB / 1.7 MB
Disk I/O (read / write): - / 1.7 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:10:23 PM
Completed: Jan 25, 2026 11:10:30 PM
Total Duration: 6s

Phases

Queue: 2s
Execution: 1s
Stage/Unstage: 3s