NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
SNPEFF_SNPEFF (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 0bef1014c397
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: a5/2bf6ad
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/2bf6add68e62a3b334e10ef890c0e4
Native ID: nf-a52bf6add68e62a3b334e10ef890c0e4-3ac86

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.7 / 4
Memory (peak / alloc): 3.3 GB / 10.0 GB
Process I/O (rchar / wchar): 640.4 MB / 13.1 MB
Disk I/O (read / write): - / 10.2 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 6:01:04 AM
Completed: Jan 26, 2026 6:02:17 AM
Total Duration: 1m 12s

Phases

Queue: 2s
Execution: 1m 4s
Stage/Unstage: 6s

Attempt 1

Execution

Status: succeeded
Hash: 98/2a1d36
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/2a1d36e81da293acc19b2d7273dca9
Native ID: nf-982a1d36e81da293acc19b2d7273dca9-d1f49

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.8 / 4
Memory (peak / alloc): 3.7 GB / 10.0 GB
Process I/O (rchar / wchar): 640.4 MB / 13.1 MB
Disk I/O (read / write): - / 10.2 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 5:50:58 AM
Completed: Jan 26, 2026 5:52:09 AM
Total Duration: 1m 10s

Phases

Queue: 3s
Execution: 1m 4s
Stage/Unstage: 3s