NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
ENSEMBLVEP_VEP (1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 21c2facb1f32
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BGFD-T1-TDNA-1_23FC2GLT4_s30_vs_1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 57/e73587
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/e7358758f3c7eedcfe71a30df92171
Native ID: nf-57e7358758f3c7eedcfe71a30df92171-6de58

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.4 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.7 GB / 144.1 MB
Disk I/O (read / write): - / 10.9 MB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 3:04:54 AM
Completed: Jan 26, 2026 3:05:53 AM
Total Duration: 58s

Phases

Queue: 2s
Execution: 45s
Stage/Unstage: 11s

Attempt 3

Execution

Status: succeeded
Hash: 33/514811
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/51481125f8e3c43bf77142be09cbaf
Native ID: nf-3351481125f8e3c43bf77142be09cbaf-4d2a1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 6
Memory (peak / alloc): 241.5 MB / 100.0 GB
Process I/O (rchar / wchar): 147.1 MB / 1.3 MB
Disk I/O (read / write): - / 96.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:29:46 AM
Completed: Jan 26, 2026 2:30:33 AM
Total Duration: 46s

Phases

Queue: 14s
Execution: 5s
Stage/Unstage: 27s

Attempt 2

Execution

Status: succeeded
Hash: eb/5e1c2a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/5e1c2a4b25ba96949d0cdfa97019a4
Native ID: nf-eb5e1c2a4b25ba96949d0cdfa97019a4-a2d27

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.3 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.1 GB / 109.4 MB
Disk I/O (read / write): - / 8.3 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:38:24 AM
Completed: Jan 26, 2026 12:39:17 AM
Total Duration: 52s

Phases

Queue: 3s
Execution: 39s
Stage/Unstage: 10s

Attempt 1

Execution

Status: succeeded
Hash: c6/e6cf01
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/e6cf01e8da1cc9c9f57120d89d8517
Native ID: nf-c6e6cf01e8da1cc9c9f57120d89d8517-46a4b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.3 / 6
Memory (peak / alloc): 2.2 GB / 100.0 GB
Process I/O (rchar / wchar): 5.1 GB / 109.4 MB
Disk I/O (read / write): - / 8.3 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:12:12 PM
Completed: Jan 25, 2026 11:13:06 PM
Total Duration: 53s

Phases

Queue: 3s
Execution: 39s
Stage/Unstage: 11s