NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
TABIX_TABIX (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 2d457312db22
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 8a/d17a6e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/d17a6ec8a9dee88a71ef09a659e8ac
Native ID: nf-8ad17a6ec8a9dee88a71ef09a659e8ac-3ed5d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 9.4 MB / 2.0 GB
Process I/O (rchar / wchar): 1.5 MB / 151.2 KB
Disk I/O (read / write): - / 156.0 KB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:52:28 AM
Completed: Jan 26, 2026 4:52:33 AM
Total Duration: 4s

Phases

Queue: 2s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: 3e/186d1f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/186d1fb52dee91269bf874275e7285
Native ID: nf-3e186d1fb52dee91269bf874275e7285-065ca

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 1
Memory (peak / alloc): 9.5 MB / 2.0 GB
Process I/O (rchar / wchar): 1.6 MB / 151.6 KB
Disk I/O (read / write): - / 156.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:27:05 AM
Completed: Jan 26, 2026 2:27:14 AM
Total Duration: 8s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: 08/2c50af
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/2c50af1ba8f46085e0b307e9ccac4d
Native ID: nf-082c50af1ba8f46085e0b307e9ccac4d-59f36

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 9.9 MB / 1.0 GB
Process I/O (rchar / wchar): 1.6 MB / 151.6 KB
Disk I/O (read / write): - / 156.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 1:02:15 AM
Completed: Jan 26, 2026 1:02:21 AM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 9b/57be02
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/57be025b67f8f99d42736e71dddc7b
Native ID: nf-9b57be025b67f8f99d42736e71dddc7b-3eb90

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 1
Memory (peak / alloc): 9.9 MB / 1.0 GB
Process I/O (rchar / wchar): 1.6 MB / 151.7 KB
Disk I/O (read / write): 16.0 KB / 156.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:34:13 PM
Completed: Jan 25, 2026 11:34:19 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -