NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 2dab75dba1b7
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: 80/9d53c5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/9d53c56130a0be1e70230f6e47e1bb
Native ID: nf-809d53c56130a0be1e70230f6e47e1bb-6af33

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 1
Memory (peak / alloc): 9.5 MB / 2.0 GB
Process I/O (rchar / wchar): 1.8 MB / 152.0 KB
Disk I/O (read / write): - / 156.0 KB
Host: i-031ce6bb5e3b37abd ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:48:38 AM
Completed: Jan 26, 2026 4:48:44 AM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded - cached
Hash: 58/3ef4cc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/3ef4cc07f18f5e5c7b790f8788429e
Native ID: nf-583ef4cc07f18f5e5c7b790f8788429e-d47e8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 1
Memory (peak / alloc): 10.2 MB / 1.0 GB
Process I/O (rchar / wchar): 1.8 MB / 151.9 KB
Disk I/O (read / write): - / 156.0 KB
Host: i-09ac7814b40862fcb ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:57:25 AM
Completed: Jan 26, 2026 12:57:33 AM
Total Duration: 7s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 8a/c3ae0b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/c3ae0b648d6375ed8cb0b402f76e84
Native ID: nf-8ac3ae0b648d6375ed8cb0b402f76e84-8f13a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 1
Memory (peak / alloc): 9.7 MB / 1.0 GB
Process I/O (rchar / wchar): 1.8 MB / 151.8 KB
Disk I/O (read / write): - / 156.0 KB
Host: i-00e15b575a975497d ( on-demand)

Runtime

Submitted: Jan 25, 2026 11:29:53 PM
Completed: Jan 25, 2026 11:30:00 PM
Total Duration: 6s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -