NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
TABIX_VCF_FOR_ENTROPY (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 3e03d1fb0e9f
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 07/380610
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/3806102b4fbe19543870c73ba5568d
Native ID: nf-073806102b4fbe19543870c73ba5568d-d0a72

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 9.7 MB / 2.0 GB
Process I/O (rchar / wchar): 1.1 MB / 144.8 KB
Disk I/O (read / write): - / 148.0 KB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:39:30 AM
Completed: Jan 26, 2026 4:39:35 AM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded - cached
Hash: d7/7ae724
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/7ae72444917d1e38964d823c3c47fe
Native ID: nf-d77ae72444917d1e38964d823c3c47fe-2775f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 9.8 MB / 1.0 GB
Process I/O (rchar / wchar): 1.1 MB / 144.7 KB
Disk I/O (read / write): - / 148.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:08:44 AM
Completed: Jan 26, 2026 12:08:51 AM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: 6e/b17b2e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/b17b2e7ae4cc71aec3e7eb40ac2051
Native ID: nf-6eb17b2e7ae4cc71aec3e7eb40ac2051-67db5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.6 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 128.8 KB / 7.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:11:14 AM
Completed: Jan 26, 2026 12:11:19 AM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 1e/8fe8a2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/8fe8a2021c7ae695a7224b9c85d639
Native ID: nf-1e8fe8a2021c7ae695a7224b9c85d639-e97a1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 3.2 MB / 1.0 GB
Process I/O (rchar / wchar): 128.6 KB / 7.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:44:52 PM
Completed: Jan 25, 2026 10:44:57 PM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -