NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
INDEL_ENTROPY_ANNOTATION (1029_BGFD-N1-BDNA-1_2375WFLT3_s30)

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Task Info

Status: succeeded
Hash: 48ac2d781c93
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 87/1f64b4
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/1f64b474aaa46cce9b4b8e5a07bc98
Native ID: nf-871f64b474aaa46cce9b4b8e5a07bc98-8afd2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 33.6 / 2
Memory (peak / alloc): 14.4 MB / 12.0 GB
Process I/O (rchar / wchar): 32.9 MB / 224.2 KB
Disk I/O (read / write): - / 232.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:34:33 AM
Completed: Jan 26, 2026 4:34:39 AM
Total Duration: 5s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 0s

Attempt 3

Execution

Status: succeeded
Hash: a8/c84cb0
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/c84cb0ff5ca67772e9eabe8a6aea4e
Native ID: nf-a8c84cb0ff5ca67772e9eabe8a6aea4e-2054b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 21.8 / 2
Memory (peak / alloc): 33.6 MB / 12.0 GB
Process I/O (rchar / wchar): 32.9 MB / 224.2 KB
Disk I/O (read / write): - / 232.0 KB
Host: i-005c1019dde196faf ( on-demand)

Runtime

Submitted: Jan 26, 2026 2:25:20 AM
Completed: Jan 26, 2026 2:27:01 AM
Total Duration: 1m 40s

Phases

Queue: 1m 36s
Execution: 1s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 7f/58f420
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/58f42058c81f2260b40e4c3de0df4f
Native ID: nf-7f58f42058c81f2260b40e4c3de0df4f-16c10

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 15.9 / 2
Memory (peak / alloc): 102.5 MB / 12.0 GB
Process I/O (rchar / wchar): 38.6 MB / 4.9 MB
Disk I/O (read / write): - / 4.9 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:12:34 AM
Completed: Jan 26, 2026 12:12:48 AM
Total Duration: 13s

Phases

Queue: 9s
Execution: 2s
Stage/Unstage: 1s

Attempt 1

Execution

Status: succeeded
Hash: 17/9e3861
Exit Code: -
Container: community.wave.seqera.io/library/htslib_pysam_numpy_scipy:275cef53a6366c67
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/9e3861a7971cdc0ad3ed9c9cdec237
Native ID: nf-179e3861a7971cdc0ad3ed9c9cdec237-77c6c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 16.6 / 2
Memory (peak / alloc): 102.3 MB / 12.0 GB
Process I/O (rchar / wchar): 38.6 MB / 4.9 MB
Disk I/O (read / write): - / 4.9 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:46:02 PM
Completed: Jan 25, 2026 10:46:16 PM
Total Duration: 13s

Phases

Queue: 9s
Execution: 2s
Stage/Unstage: 1s