NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr15_81334720-81334975.bed) - sarek-1029_BGFD-speedups2-1 - Workflow Tracker

Runs
sarek-1029_B..speedups2-1
Tasks
STRELKA_SINGLE (1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr15_81334720-81334975.bed)

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Task Info

Status: succeeded
Hash: 49ff4ee8fd29
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SINGLE_STRELKA:STRELKA_SINGLE
Tag: 1029_BGFD-N1-BDNA-1_2375WFLT3_s30;chr15_81334720-81334975.bed
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: 0e/5f25f7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/strelka:2.9.10--h9ee0642_1
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/5f25f73b791b5fb1c42774e059d1ab
Native ID: nf-0e5f25f73b791b5fb1c42774e059d1ab-00c99

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.1 / 10
Memory (peak / alloc): 625.2 MB / 20.0 GB
Process I/O (rchar / wchar): 3.4 GB / 30.1 MB
Disk I/O (read / write): 125.7 MB / 19.7 MB
Host: i-043fd5880641b4430 ( on-demand)

Runtime

Submitted: Jan 26, 2026 4:35:04 AM
Completed: Jan 26, 2026 4:38:51 AM
Total Duration: 3m 46s

Phases

Queue: 47s
Execution: 2m 3s
Stage/Unstage: 56s

Attempt 2

Execution

Status: succeeded - cached
Hash: 93/83d752
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/strelka:2.9.10--h9ee0642_1
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/83d752981d608d8f4f679ad563cccc
Native ID: nf-9383d752981d608d8f4f679ad563cccc-4327e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.5 / 10
Memory (peak / alloc): 652.3 MB / 8.0 GB
Process I/O (rchar / wchar): 12.7 GB / 99.2 MB
Disk I/O (read / write): 3.1 GB / 66.1 MB
Host: i-0740e0d1341dc4d7a ( on-demand)

Runtime

Submitted: Jan 26, 2026 12:02:45 AM
Completed: Jan 26, 2026 12:08:19 AM
Total Duration: 5m 33s

Phases

Queue: 1m 18s
Execution: 3m 19s
Stage/Unstage: 56s

Attempt 1

Execution

Status: succeeded
Hash: 23/846242
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/strelka:2.9.10--h9ee0642_1
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/84624258427983b7daf6d74fa7ca76
Native ID: nf-2384624258427983b7daf6d74fa7ca76-6ec0e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 7.7 / 10
Memory (peak / alloc): 677.5 MB / 8.0 GB
Process I/O (rchar / wchar): 14.1 GB / 92.8 MB
Disk I/O (read / write): 9.2 GB / 64.1 MB
Host: i-09a809f6ffd52dd5b ( on-demand)

Runtime

Submitted: Jan 25, 2026 10:36:34 PM
Completed: Jan 25, 2026 10:41:08 PM
Total Duration: 4m 33s

Phases

Queue: 1m 17s
Execution: 2m 19s
Stage/Unstage: 57s